RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 COPS2P61201 443 aa11.07□□□□□ -0.64
CD44-210ENST00000434472 ACTN3Q08043 901 aaPredicted RBP11.07□□□□□ -0.64
CD44-210ENST00000434472 KLF1Q13351 362 aaPredicted RBP11.07□□□□□ -0.64
CD44-210ENST00000434472 CAPSQ13938 189 aa11.07□□□□□ -0.64
CD44-210ENST00000434472 SPOPLQ6IQ16 392 aa11.07□□□□□ -0.64
CD44-210ENST00000434472 KCNV1Q6PIU1 500 aa11.07□□□□□ -0.64
CD44-210ENST00000434472 POTEAQ6S8J7 498 aa11.07□□□□□ -0.64
CD44-210ENST00000434472 LBX2Q6XYB7 198 aa11.07□□□□□ -0.64
CD44-210ENST00000434472 PACS2Q86VP3 889 aa11.07□□□□□ -0.64
CD44-210ENST00000434472 RELL1Q8IUW5 271 aa11.07□□□□□ -0.64
CD44-210ENST00000434472 ZBTB8OSQ8IWT0 167 aa11.07□□□□□ -0.64
CD44-210ENST00000434472 CNPY4Q8N129 248 aa11.07□□□□□ -0.64
CD44-210ENST00000434472 UBR7Q8N806 425 aa11.07□□□□□ -0.64
CD44-210ENST00000434472 ZBTB45Q96K62 511 aaPredicted RBP11.07□□□□□ -0.64
CD44-210ENST00000434472 CCDC114Q96M63 670 aa11.07□□□□□ -0.64
CD44-210ENST00000434472 JPH2Q9BR39 696 aaPredicted RBP11.07□□□□□ -0.64
CD44-210ENST00000434472 CHST7Q9NS84 486 aa11.07□□□□□ -0.64
CD44-210ENST00000434472 INTS9Q9NV88 658 aaKnown RBP11.07□□□□□ -0.64
CD44-210ENST00000434472 NUB1Q9Y5A7 615 aa11.07□□□□□ -0.64
CD44-210ENST00000434472 PTPRJQ12913 1337 aa11.07□□□□□ -0.64
CD44-210ENST00000434472 SSC5DA1L4H1 1573 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 SMIM23A6NLE4 172 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 TOM1L1O75674 476 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 FARP2O94887 1054 aaPredicted RBP11.06□□□□□ -0.64
CD44-210ENST00000434472 TTC4O95801 387 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 GHRP10912 638 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 RALAP11233 206 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 IVDP26440 423 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 SSR1P43307 286 aaKnown RBP11.06□□□□□ -0.64
CD44-210ENST00000434472 ITGA8P53708 1063 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 WNT7BP56706 349 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 MXD4Q14582 209 aaPredicted RBP11.06□□□□□ -0.64
CD44-210ENST00000434472 ITIH4Q14624 930 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 SGSM1Q2NKQ1 1148 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 LACTB2Q53H82 288 aaPredicted RBP11.06□□□□□ -0.64
CD44-210ENST00000434472 DRICH1Q6PGQ1 229 aaPredicted RBP11.06□□□□□ -0.64
CD44-210ENST00000434472 MMS22LQ6ZRQ5 1243 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 DEFB132Q7Z7B7 95 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 ANKS4BQ8N8V4 417 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 TMEM35BQ8NCS4 154 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 CCDC197Q8NCU1 140 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.06□□□□□ -0.64
CD44-210ENST00000434472 EPS8L3Q8TE67 593 aaKnown RBP11.06□□□□□ -0.64
CD44-210ENST00000434472 IPO4Q8TEX9 1081 aaKnown RBP11.06□□□□□ -0.64
CD44-210ENST00000434472 ELMO3Q96BJ8 720 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 PCYT2Q99447 389 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 LRRC4CQ9HCJ2 640 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 DDX56Q9NY93 547 aaKnown RBP11.06□□□□□ -0.64
CD44-210ENST00000434472 CD2APQ9Y5K6 639 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 CAPN7Q9Y6W3 813 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 ZNFX1Q9P2E3 1918 aaKnown RBP11.06□□□□□ -0.64
CD44-210ENST00000434472 MYH9P35579 1960 aaKnown RBP11.06□□□□□ -0.64
CD44-210ENST00000434472 TMEM191CA6NGB0 347 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 OGTO15294 1046 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 TJP3O95049 919 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 ASS1P00966 412 aaKnown RBP11.06□□□□□ -0.64
CD44-210ENST00000434472 TMEM191BP0C7N4 346 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 MMP8P22894 467 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 PTPN7P35236 360 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 IFI35P80217 286 aaPredicted RBP11.06□□□□□ -0.64
CD44-210ENST00000434472 CNTN2Q02246 1040 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 QPCTQ16769 361 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 DUOXA2Q1HG44 320 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 CDCA2Q69YH5 1023 aaPredicted RBP11.06□□□□□ -0.64
CD44-210ENST00000434472 METTL7BQ6UX53 244 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 OR5B17Q8NGF7 314 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 UHMK1Q8TAS1 419 aaKnown RBP11.06□□□□□ -0.64
CD44-210ENST00000434472 MDM1Q8TC05 714 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 ATXN2LQ8WWM7 1075 aaKnown RBP11.06□□□□□ -0.64
CD44-210ENST00000434472 ZNF606Q8WXB4 792 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 ATG4AQ8WYN0 398 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 FAXDC2Q96IV6 333 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 ZNF317Q96PQ6 595 aaPredicted RBP11.06□□□□□ -0.64
CD44-210ENST00000434472 TCHPQ9BT92 498 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 TRIM7Q9C029 511 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 NIF3L1Q9GZT8 377 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 MTFR1LQ9H019 292 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 ADAM7Q9H2U9 754 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 KDM4CQ9H3R0 1056 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 AAASQ9NRG9 546 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 GGA3Q9NZ52 723 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 SAMD15Q9P1V8 674 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 USTQ9Y2C2 406 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 NEU2Q9Y3R4 380 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 CEP83Q9Y592 693 aa11.06□□□□□ -0.64
CD44-210ENST00000434472 BRCA1P38398 1863 aaKnown RBP11.05□□□□□ -0.64
CD44-210ENST00000434472 USP2O75604 605 aaPredicted RBP11.05□□□□□ -0.64
CD44-210ENST00000434472 PRKCBP05771 671 aa11.05□□□□□ -0.64
CD44-210ENST00000434472 TAS2R40P59535 323 aa11.05□□□□□ -0.64
CD44-210ENST00000434472 NFX1Q12986 1120 aaKnown RBP11.05□□□□□ -0.64
CD44-210ENST00000434472 TRPC3Q13507 836 aa11.05□□□□□ -0.64
CD44-210ENST00000434472 TFDP1Q14186 410 aa11.05□□□□□ -0.64
CD44-210ENST00000434472 PIGHQ14442 188 aaPredicted RBP11.05□□□□□ -0.64
CD44-210ENST00000434472 STAT4Q14765 748 aa11.05□□□□□ -0.64
CD44-210ENST00000434472 CNGA2Q16280 664 aa11.05□□□□□ -0.64
CD44-210ENST00000434472 KCTD19Q17RG1 926 aaPredicted RBP11.05□□□□□ -0.64
CD44-210ENST00000434472 ZBTB41Q5SVQ8 909 aa11.05□□□□□ -0.64
CD44-210ENST00000434472 PRAMEF18Q5VWM3 479 aa11.05□□□□□ -0.64
CD44-210ENST00000434472 IZUMO3Q5VZ72 239 aa11.05□□□□□ -0.64
CD44-210ENST00000434472 DNAJC24Q6P3W2 148 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms