RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 ATF2P15336 505 aa12.82□□□□□ -0.36
HDAC4-202ENST00000430200 GJA1P17302 382 aa12.82□□□□□ -0.36
HDAC4-202ENST00000430200 ADSSP30520 456 aa12.82□□□□□ -0.36
HDAC4-202ENST00000430200 ACOT2P49753 483 aa12.82□□□□□ -0.36
HDAC4-202ENST00000430200 PPP2R3AQ06190 1150 aa12.82□□□□□ -0.36
HDAC4-202ENST00000430200 CTXN3Q4LDR2 81 aa12.82□□□□□ -0.36
HDAC4-202ENST00000430200 ZNF280DQ6N043 979 aa12.82□□□□□ -0.36
HDAC4-202ENST00000430200 FRMD5Q7Z6J6 570 aa12.82□□□□□ -0.36
HDAC4-202ENST00000430200 TCEAL8Q8IYN2 117 aa12.82□□□□□ -0.36
HDAC4-202ENST00000430200 BEST2Q8NFU1 509 aa12.82□□□□□ -0.36
HDAC4-202ENST00000430200 RASSF8Q8NHQ8 419 aa12.82□□□□□ -0.36
HDAC4-202ENST00000430200 ATOH1Q92858 354 aaPredicted RBP12.82□□□□□ -0.36
HDAC4-202ENST00000430200 PGLYRP2Q96PD5 576 aa12.82□□□□□ -0.36
HDAC4-202ENST00000430200 PRRX2Q99811 253 aa12.82□□□□□ -0.36
HDAC4-202ENST00000430200 MSTO1Q9BUK6 570 aa12.82□□□□□ -0.36
HDAC4-202ENST00000430200 DNAJC25Q9H1X3 360 aa12.82□□□□□ -0.36
HDAC4-202ENST00000430200 WNT16Q9UBV4 365 aa12.82□□□□□ -0.36
HDAC4-202ENST00000430200 YIPF1Q9Y548 306 aa12.82□□□□□ -0.36
HDAC4-202ENST00000430200 SRPRBQ9Y5M8 271 aaKnown RBP12.82□□□□□ -0.36
HDAC4-202ENST00000430200 F5P12259 2224 aa12.81□□□□□ -0.36
HDAC4-202ENST00000430200 SOAT2O75908 522 aa12.81□□□□□ -0.36
HDAC4-202ENST00000430200 KRT18P05783 430 aaKnown RBP12.81□□□□□ -0.36
HDAC4-202ENST00000430200 DCNP07585 359 aaKnown RBP12.81□□□□□ -0.36
HDAC4-202ENST00000430200 ADCY1Q08828 1119 aa12.81□□□□□ -0.36
HDAC4-202ENST00000430200 UVSSAQ2YD98 709 aa12.81□□□□□ -0.36
HDAC4-202ENST00000430200 SPATA1Q5VX52 437 aa12.81□□□□□ -0.36
HDAC4-202ENST00000430200 TMC8Q8IU68 726 aa12.81□□□□□ -0.36
HDAC4-202ENST00000430200 DTWD2Q8NBA8 298 aa12.81□□□□□ -0.36
HDAC4-202ENST00000430200 OR10T2Q8NGX3 314 aa12.81□□□□□ -0.36
HDAC4-202ENST00000430200 MCRS1Q96EZ8 462 aa12.81□□□□□ -0.36
HDAC4-202ENST00000430200 ZSWIM3Q96MP5 696 aa12.81□□□□□ -0.36
HDAC4-202ENST00000430200 RTP3Q9BQQ7 232 aa12.81□□□□□ -0.36
HDAC4-202ENST00000430200 CORO1BQ9BR76 489 aa12.81□□□□□ -0.36
HDAC4-202ENST00000430200 ST6GALNAC4Q9H4F1 302 aa12.81□□□□□ -0.36
HDAC4-202ENST00000430200 PLEKHA5Q9HAU0 1116 aa12.81□□□□□ -0.36
HDAC4-202ENST00000430200 CYP4F11Q9HBI6 524 aa12.81□□□□□ -0.36
HDAC4-202ENST00000430200 TBC1D7Q9P0N9 293 aa12.81□□□□□ -0.36
HDAC4-202ENST00000430200 UBQLN1Q9UMX0 589 aaKnown RBP12.81□□□□□ -0.36
HDAC4-202ENST00000430200 MTF2Q9Y483 593 aaPredicted RBP12.81□□□□□ -0.36
HDAC4-202ENST00000430200 STYXL1Q9Y6J8 313 aa12.81□□□□□ -0.36
HDAC4-202ENST00000430200 EML5Q05BV3 1969 aa12.8□□□□□ -0.36
HDAC4-202ENST00000430200 ANO9A1A5B4 782 aa12.8□□□□□ -0.36
HDAC4-202ENST00000430200 PRR23AA6NEV1 266 aa12.8□□□□□ -0.36
HDAC4-202ENST00000430200 K7ELQ4 463 aaPredicted RBP12.8□□□□□ -0.36
HDAC4-202ENST00000430200 PRRG1O14668 218 aa12.8□□□□□ -0.36
HDAC4-202ENST00000430200 GFRA3O60609 400 aa12.8□□□□□ -0.36
HDAC4-202ENST00000430200 CPB1P15086 417 aa12.8□□□□□ -0.36
HDAC4-202ENST00000430200 DDIT3P35638 169 aa12.8□□□□□ -0.36
HDAC4-202ENST00000430200 NBL1P41271 181 aa12.8□□□□□ -0.36
HDAC4-202ENST00000430200 TWF1Q12792 350 aa12.8□□□□□ -0.36
HDAC4-202ENST00000430200 ANGPT1Q15389 498 aa12.8□□□□□ -0.36
HDAC4-202ENST00000430200 CCDC142Q17RM4 750 aa12.8□□□□□ -0.36
HDAC4-202ENST00000430200 STXBP5Q5T5C0 1151 aa12.8□□□□□ -0.36
HDAC4-202ENST00000430200 C9orf57Q5W0N0 161 aa12.8□□□□□ -0.36
HDAC4-202ENST00000430200 TANGO2Q6ICL3 276 aa12.8□□□□□ -0.36
HDAC4-202ENST00000430200 HPS3Q969F9 1004 aa12.8□□□□□ -0.36
HDAC4-202ENST00000430200 RSPRY1Q96DX4 576 aa12.8□□□□□ -0.36
HDAC4-202ENST00000430200 FAM212AQ96EL1 285 aa12.8□□□□□ -0.36
HDAC4-202ENST00000430200 LRRC3Q9BY71 257 aa12.8□□□□□ -0.36
HDAC4-202ENST00000430200 RPF1Q9H9Y2 349 aaKnown RBP12.8□□□□□ -0.36
HDAC4-202ENST00000430200 AVENQ9NQS1 362 aaPredicted RBP12.8□□□□□ -0.36
HDAC4-202ENST00000430200 STK17AQ9UEE5 414 aa12.8□□□□□ -0.36
HDAC4-202ENST00000430200 MRPS23Q9Y3D9 190 aaKnown RBP12.8□□□□□ -0.36
HDAC4-202ENST00000430200 PTPRJQ12913 1337 aa12.8□□□□□ -0.36
HDAC4-202ENST00000430200 GPR179Q6PRD1 2367 aa12.79□□□□□ -0.36
HDAC4-202ENST00000430200 EP300Q09472 2414 aaPredicted RBP12.79□□□□□ -0.36
HDAC4-202ENST00000430200 FRMD3A2A2Y4 597 aa12.79□□□□□ -0.36
HDAC4-202ENST00000430200 MTMR11A4FU01 709 aa12.79□□□□□ -0.36
HDAC4-202ENST00000430200 PROB1E7EW31 1015 aa12.79□□□□□ -0.36
HDAC4-202ENST00000430200 H0YCG3 227 aa12.79□□□□□ -0.36
HDAC4-202ENST00000430200 PIRO00625 290 aa12.79□□□□□ -0.36
HDAC4-202ENST00000430200 OAZ2O95190 189 aa12.79□□□□□ -0.36
HDAC4-202ENST00000430200 LRG1P02750 347 aa12.79□□□□□ -0.36
HDAC4-202ENST00000430200 CYP3A5P20815 502 aa12.79□□□□□ -0.36
HDAC4-202ENST00000430200 PDCP20941 246 aa12.79□□□□□ -0.36
HDAC4-202ENST00000430200 CD72P21854 359 aa12.79□□□□□ -0.36
HDAC4-202ENST00000430200 NASPP49321 788 aaPredicted RBP12.79□□□□□ -0.36
HDAC4-202ENST00000430200 NUBP1P53384 320 aa12.79□□□□□ -0.36
HDAC4-202ENST00000430200 LILRA4P59901 499 aa12.79□□□□□ -0.36
HDAC4-202ENST00000430200 YWHAHQ04917 246 aaPredicted RBP12.79□□□□□ -0.36
HDAC4-202ENST00000430200 SNW1Q13573 536 aaKnown RBP12.79□□□□□ -0.36
HDAC4-202ENST00000430200 PKP1Q13835 747 aa12.79□□□□□ -0.36
HDAC4-202ENST00000430200 GRM2Q14416 872 aa12.79□□□□□ -0.36
HDAC4-202ENST00000430200 SLC39A14Q15043 492 aa12.79□□□□□ -0.36
HDAC4-202ENST00000430200 E2F4Q16254 413 aa12.79□□□□□ -0.36
HDAC4-202ENST00000430200 FAM78AQ5JUQ0 283 aa12.79□□□□□ -0.36
HDAC4-202ENST00000430200 ZNF720Q7Z2F6 126 aa12.79□□□□□ -0.36
HDAC4-202ENST00000430200 MAML2Q8IZL2 1156 aaPredicted RBP12.79□□□□□ -0.36
HDAC4-202ENST00000430200 PJA1Q8NG27 643 aa12.79□□□□□ -0.36
HDAC4-202ENST00000430200 SHKBP1Q8TBC3 707 aa12.79□□□□□ -0.36
HDAC4-202ENST00000430200 NXPE3Q969Y0 559 aa12.79□□□□□ -0.36
HDAC4-202ENST00000430200 SAAL1Q96ER3 474 aa12.79□□□□□ -0.36
HDAC4-202ENST00000430200 INTS4Q96HW7 963 aaKnown RBP12.79□□□□□ -0.36
HDAC4-202ENST00000430200 MKNK1Q9BUB5 465 aa12.79□□□□□ -0.36
HDAC4-202ENST00000430200 DDX23Q9BUQ8 820 aaKnown RBP12.79□□□□□ -0.36
HDAC4-202ENST00000430200 PANK2Q9BZ23 570 aa12.79□□□□□ -0.36
HDAC4-202ENST00000430200 ZNF334Q9HCZ1 680 aaPredicted RBP12.79□□□□□ -0.36
HDAC4-202ENST00000430200 AFF4Q9UHB7 1163 aaKnown RBP12.79□□□□□ -0.36
HDAC4-202ENST00000430200 KCNH3Q9ULD8 1083 aa12.79□□□□□ -0.36
HDAC4-202ENST00000430200 ZFP37Q9Y6Q3 630 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms