RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	SPAG1	Q07617	926 aa		19.29	■□□□□ 0.68
MRPL28-203	ENST00000429738	SLC39A14	Q15043	492 aa		19.29	■□□□□ 0.68
MRPL28-203	ENST00000429738	SLC44A4	Q53GD3	710 aa		19.29	■□□□□ 0.68
MRPL28-203	ENST00000429738	KRI1	Q8N9T8	703 aa	Known RBP	19.29	■□□□□ 0.68
MRPL28-203	ENST00000429738	DDX12P	Q92771	950 aa		19.29	■□□□□ 0.68
MRPL28-203	ENST00000429738	FGF13	Q92913	245 aa		19.29	■□□□□ 0.68
MRPL28-203	ENST00000429738	KIF12	Q96FN5	646 aa		19.29	■□□□□ 0.68
MRPL28-203	ENST00000429738	TSPAN18	Q96SJ8	248 aa		19.29	■□□□□ 0.68
MRPL28-203	ENST00000429738	OSBPL6	Q9BZF3	934 aa		19.29	■□□□□ 0.68
MRPL28-203	ENST00000429738	ZHX3	Q9H4I2	956 aa		19.29	■□□□□ 0.68
MRPL28-203	ENST00000429738	DNMT3B	Q9UBC3	853 aa	Known RBP	19.29	■□□□□ 0.68
MRPL28-203	ENST00000429738	FBXL5	Q9UKA1	691 aa		19.29	■□□□□ 0.68
MRPL28-203	ENST00000429738	CPSF3	Q9UKF6	684 aa	Known RBP	19.29	■□□□□ 0.68
MRPL28-203	ENST00000429738	FBXO4	Q9UKT5	387 aa		19.29	■□□□□ 0.68
MRPL28-203	ENST00000429738	UBQLN1	Q9UMX0	589 aa	Known RBP	19.29	■□□□□ 0.68
MRPL28-203	ENST00000429738	STYXL1	Q9Y6J8	313 aa		19.29	■□□□□ 0.68
MRPL28-203	ENST00000429738	ARHGEF37	A1IGU5	675 aa		19.28	■□□□□ 0.68
MRPL28-203	ENST00000429738		H7C4K7	107 aa		19.28	■□□□□ 0.68
MRPL28-203	ENST00000429738		M0QZQ0	153 aa		19.28	■□□□□ 0.68
MRPL28-203	ENST00000429738	PPP1R37	O75864	691 aa		19.28	■□□□□ 0.68
MRPL28-203	ENST00000429738	ATF2	P15336	505 aa		19.28	■□□□□ 0.68
MRPL28-203	ENST00000429738	NASP	P49321	788 aa	Predicted RBP	19.28	■□□□□ 0.68
MRPL28-203	ENST00000429738	MLF2	Q15773	248 aa	Predicted RBP	19.28	■□□□□ 0.68
MRPL28-203	ENST00000429738	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	19.28	■□□□□ 0.68
MRPL28-203	ENST00000429738	ZNF720	Q7Z2F6	126 aa		19.28	■□□□□ 0.68
MRPL28-203	ENST00000429738	SNX21	Q969T3	373 aa		19.28	■□□□□ 0.68
MRPL28-203	ENST00000429738	DNAJC19	Q96DA6	116 aa		19.28	■□□□□ 0.68
MRPL28-203	ENST00000429738	MSTO1	Q9BUK6	570 aa		19.28	■□□□□ 0.68
MRPL28-203	ENST00000429738	STRA6	Q9BX79	667 aa		19.28	■□□□□ 0.68
MRPL28-203	ENST00000429738	RPF1	Q9H9Y2	349 aa	Known RBP	19.28	■□□□□ 0.68
MRPL28-203	ENST00000429738	FOXD4L1	Q9NU39	408 aa		19.28	■□□□□ 0.68
MRPL28-203	ENST00000429738	SPATA6	Q9NWH7	488 aa	Predicted RBP	19.28	■□□□□ 0.68
MRPL28-203	ENST00000429738	MYMK	A6NI61	221 aa		19.27	■□□□□ 0.68
MRPL28-203	ENST00000429738	LAMTOR5	O43504	91 aa		19.27	■□□□□ 0.68
MRPL28-203	ENST00000429738	TXLNA	P40222	546 aa		19.27	■□□□□ 0.68
MRPL28-203	ENST00000429738	PFKP	Q01813	784 aa		19.27	■□□□□ 0.68
MRPL28-203	ENST00000429738	RRAGB	Q5VZM2	374 aa		19.27	■□□□□ 0.68
MRPL28-203	ENST00000429738	DYM	Q7RTS9	669 aa		19.27	■□□□□ 0.68
MRPL28-203	ENST00000429738	SFR1	Q86XK3	245 aa		19.27	■□□□□ 0.68
MRPL28-203	ENST00000429738	CD302	Q8IX05	232 aa		19.27	■□□□□ 0.68
MRPL28-203	ENST00000429738	APPL2	Q8NEU8	664 aa		19.27	■□□□□ 0.68
MRPL28-203	ENST00000429738	ITFG1	Q8TB96	612 aa		19.27	■□□□□ 0.68
MRPL28-203	ENST00000429738	HCFC1R1	Q9NWW0	138 aa		19.27	■□□□□ 0.68
MRPL28-203	ENST00000429738	KCNH3	Q9ULD8	1083 aa		19.27	■□□□□ 0.68
MRPL28-203	ENST00000429738	PCDHB8	Q9UN66	801 aa		19.27	■□□□□ 0.68
MRPL28-203	ENST00000429738	POLI	Q9UNA4	740 aa		19.27	■□□□□ 0.68
MRPL28-203	ENST00000429738	MTF2	Q9Y483	593 aa	Predicted RBP	19.27	■□□□□ 0.68
MRPL28-203	ENST00000429738	EPG5	Q9HCE0	2579 aa		19.26	■□□□□ 0.67
MRPL28-203	ENST00000429738		A0A087X0B3	334 aa		19.26	■□□□□ 0.67
MRPL28-203	ENST00000429738	FAM170B	A6NMN3	283 aa		19.26	■□□□□ 0.67
MRPL28-203	ENST00000429738	ANKRD63	C9JTQ0	380 aa		19.26	■□□□□ 0.67
MRPL28-203	ENST00000429738	SPTLC1	O15269	473 aa		19.26	■□□□□ 0.67
MRPL28-203	ENST00000429738	XPOT	O43592	962 aa	Known RBP	19.26	■□□□□ 0.67
MRPL28-203	ENST00000429738	UBXN2B	Q14CS0	331 aa		19.26	■□□□□ 0.67
MRPL28-203	ENST00000429738	RSPO4	Q2I0M5	234 aa	Predicted RBP	19.26	■□□□□ 0.67
MRPL28-203	ENST00000429738	CTXN3	Q4LDR2	81 aa		19.26	■□□□□ 0.67
MRPL28-203	ENST00000429738	SPATA1	Q5VX52	437 aa		19.26	■□□□□ 0.67
MRPL28-203	ENST00000429738	TPGS2	Q68CL5	300 aa		19.26	■□□□□ 0.67
MRPL28-203	ENST00000429738	ZNF280D	Q6N043	979 aa		19.26	■□□□□ 0.67
MRPL28-203	ENST00000429738	SV2B	Q7L1I2	683 aa		19.26	■□□□□ 0.67
MRPL28-203	ENST00000429738	TCEAL8	Q8IYN2	117 aa		19.26	■□□□□ 0.67
MRPL28-203	ENST00000429738	LINC00301	Q8NCQ3	95 aa		19.26	■□□□□ 0.67
MRPL28-203	ENST00000429738	HVCN1	Q96D96	273 aa		19.26	■□□□□ 0.67
MRPL28-203	ENST00000429738	AVEN	Q9NQS1	362 aa	Predicted RBP	19.26	■□□□□ 0.67
MRPL28-203	ENST00000429738	SEL1L	Q9UBV2	794 aa		19.26	■□□□□ 0.67
MRPL28-203	ENST00000429738	SCN1A	P35498	2009 aa		19.25	■□□□□ 0.67
MRPL28-203	ENST00000429738	FRMD3	A2A2Y4	597 aa		19.25	■□□□□ 0.67
MRPL28-203	ENST00000429738	TISP43	B9A030	160 aa		19.25	■□□□□ 0.67
MRPL28-203	ENST00000429738	OAZ2	O95190	189 aa		19.25	■□□□□ 0.67
MRPL28-203	ENST00000429738	MAGEA9	P43362	315 aa		19.25	■□□□□ 0.67
MRPL28-203	ENST00000429738	GUCY2F	P51841	1108 aa		19.25	■□□□□ 0.67
MRPL28-203	ENST00000429738	POU5F1	Q01860	360 aa	Known RBP	19.25	■□□□□ 0.67
MRPL28-203	ENST00000429738	CSTF1	Q05048	431 aa	Known RBP	19.25	■□□□□ 0.67
MRPL28-203	ENST00000429738	PABPC1L	Q4VXU2	614 aa	Known RBP	19.25	■□□□□ 0.67
MRPL28-203	ENST00000429738	SLFN12L	Q6IEE8	588 aa		19.25	■□□□□ 0.67
MRPL28-203	ENST00000429738	CCDC73	Q6ZRK6	1079 aa		19.25	■□□□□ 0.67
MRPL28-203	ENST00000429738	ATRIP	Q8WXE1	791 aa		19.25	■□□□□ 0.67
MRPL28-203	ENST00000429738	PCDHGA2	Q9Y5H1	932 aa		19.25	■□□□□ 0.67
MRPL28-203	ENST00000429738	F5	P12259	2224 aa		19.24	■□□□□ 0.67
MRPL28-203	ENST00000429738	TSC2	P49815	1807 aa		19.24	■□□□□ 0.67
MRPL28-203	ENST00000429738	SEC24A	O95486	1093 aa		19.24	■□□□□ 0.67
MRPL28-203	ENST00000429738	ADSS	P30520	456 aa		19.24	■□□□□ 0.67
MRPL28-203	ENST00000429738	ELF1	P32519	619 aa		19.24	■□□□□ 0.67
MRPL28-203	ENST00000429738	JADE1	Q6IE81	842 aa		19.24	■□□□□ 0.67
MRPL28-203	ENST00000429738	NPAS3	Q8IXF0	933 aa		19.24	■□□□□ 0.67
MRPL28-203	ENST00000429738	GPR161	Q8N6U8	529 aa	Known RBP	19.24	■□□□□ 0.67
MRPL28-203	ENST00000429738	BEST2	Q8NFU1	509 aa		19.24	■□□□□ 0.67
MRPL28-203	ENST00000429738	NELL2	Q99435	816 aa		19.24	■□□□□ 0.67
MRPL28-203	ENST00000429738	KXD1	Q9BQD3	176 aa		19.24	■□□□□ 0.67
MRPL28-203	ENST00000429738	IKZF4	Q9H2S9	585 aa		19.24	■□□□□ 0.67
MRPL28-203	ENST00000429738	ASB7	Q9H672	318 aa		19.24	■□□□□ 0.67
MRPL28-203	ENST00000429738	LTB4R2	Q9NPC1	389 aa		19.24	■□□□□ 0.67
MRPL28-203	ENST00000429738	OLFML3	Q9NRN5	406 aa		19.24	■□□□□ 0.67
MRPL28-203	ENST00000429738	NCDN	Q9UBB6	729 aa		19.24	■□□□□ 0.67
MRPL28-203	ENST00000429738	AFF4	Q9UHB7	1163 aa	Known RBP	19.24	■□□□□ 0.67
MRPL28-203	ENST00000429738	MAFF	Q9ULX9	164 aa		19.24	■□□□□ 0.67
MRPL28-203	ENST00000429738	DERA	Q9Y315	318 aa		19.24	■□□□□ 0.67
MRPL28-203	ENST00000429738	INSL5	Q9Y5Q6	135 aa		19.24	■□□□□ 0.67
MRPL28-203	ENST00000429738	ACACB	O00763	2458 aa		19.23	■□□□□ 0.67
MRPL28-203	ENST00000429738	PPEF2	O14830	753 aa		19.23	■□□□□ 0.67

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms