RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 SLC27A1Q6PCB7 646 aa10.15□□□□□ -0.78
LSG1-202ENST00000427461 B3GNT9Q6UX72 402 aa10.15□□□□□ -0.78
LSG1-202ENST00000427461 SLCO6A1Q86UG4 719 aa10.15□□□□□ -0.78
LSG1-202ENST00000427461 TMC8Q8IU68 726 aa10.15□□□□□ -0.78
LSG1-202ENST00000427461 TEX2Q8IWB9 1127 aa10.15□□□□□ -0.78
LSG1-202ENST00000427461 TMEFF1Q8IYR6 380 aa10.15□□□□□ -0.78
LSG1-202ENST00000427461 RLN3Q8WXF3 142 aa10.15□□□□□ -0.78
LSG1-202ENST00000427461 CCDC136Q96JN2 1154 aa10.15□□□□□ -0.78
LSG1-202ENST00000427461 GPR88Q9GZN0 384 aa10.15□□□□□ -0.78
LSG1-202ENST00000427461 CLMPQ9H6B4 373 aa10.15□□□□□ -0.78
LSG1-202ENST00000427461 GOLGA2P5Q9HBQ8 144 aa10.15□□□□□ -0.78
LSG1-202ENST00000427461 WRAP73Q9P2S5 460 aaPredicted RBP10.15□□□□□ -0.78
LSG1-202ENST00000427461 SLC12A7Q9Y666 1083 aa10.15□□□□□ -0.78
LSG1-202ENST00000427461 TRIP11Q15643 1979 aa10.14□□□□□ -0.79
LSG1-202ENST00000427461 PIEZO2Q9H5I5 2752 aa10.14□□□□□ -0.79
LSG1-202ENST00000427461 TBX3O15119 743 aa10.14□□□□□ -0.79
LSG1-202ENST00000427461 OPHN1O60890 802 aa10.14□□□□□ -0.79
LSG1-202ENST00000427461 RECQL4O94761 1208 aa10.14□□□□□ -0.79
LSG1-202ENST00000427461 ABCG1P45844 678 aa10.14□□□□□ -0.79
LSG1-202ENST00000427461 GALK1P51570 392 aa10.14□□□□□ -0.79
LSG1-202ENST00000427461 EMC2Q15006 297 aa10.14□□□□□ -0.79
LSG1-202ENST00000427461 MAPK6Q16659 721 aa10.14□□□□□ -0.79
LSG1-202ENST00000427461 GLRA4Q5JXX5 417 aa10.14□□□□□ -0.79
LSG1-202ENST00000427461 ANO7Q6IWH7 933 aa10.14□□□□□ -0.79
LSG1-202ENST00000427461 SLC23A3Q6PIS1 610 aa10.14□□□□□ -0.79
LSG1-202ENST00000427461 SCUBE3Q8IX30 993 aa10.14□□□□□ -0.79
LSG1-202ENST00000427461 MINDY1Q8N5J2 469 aa10.14□□□□□ -0.79
LSG1-202ENST00000427461 RDM1Q8NG50 284 aa10.14□□□□□ -0.79
LSG1-202ENST00000427461 BPIFB1Q8TDL5 484 aa10.14□□□□□ -0.79
LSG1-202ENST00000427461 POLR3CQ9BUI4 534 aaPredicted RBP10.14□□□□□ -0.79
LSG1-202ENST00000427461 SMG9Q9H0W8 520 aaKnown RBP10.14□□□□□ -0.79
LSG1-202ENST00000427461 GLT8D2Q9H1C3 349 aa10.14□□□□□ -0.79
LSG1-202ENST00000427461 HPS4Q9NQG7 708 aa10.14□□□□□ -0.79
LSG1-202ENST00000427461 GKN1Q9NS71 199 aa10.14□□□□□ -0.79
LSG1-202ENST00000427461 DKK4Q9UBT3 224 aa10.14□□□□□ -0.79
LSG1-202ENST00000427461 COL12A1Q99715 3063 aa10.14□□□□□ -0.79
LSG1-202ENST00000427461 PCDH15Q96QU1 1955 aa10.14□□□□□ -0.79
LSG1-202ENST00000427461 ZMYM2Q9UBW7 1377 aa10.14□□□□□ -0.79
LSG1-202ENST00000427461 A0A1B0GUA9 196 aa10.13□□□□□ -0.79
LSG1-202ENST00000427461 TRABD2BA6NFA1 517 aa10.13□□□□□ -0.79
LSG1-202ENST00000427461 TTLL13PA6NNM8 815 aa10.13□□□□□ -0.79
LSG1-202ENST00000427461 TMEM189-UBE2V1I3L0A0 370 aa10.13□□□□□ -0.79
LSG1-202ENST00000427461 EML1O00423 815 aa10.13□□□□□ -0.79
LSG1-202ENST00000427461 ZBTB39O15060 712 aa10.13□□□□□ -0.79
LSG1-202ENST00000427461 ASAP2O43150 1006 aa10.13□□□□□ -0.79
LSG1-202ENST00000427461 PSMC5P62195 406 aa10.13□□□□□ -0.79
LSG1-202ENST00000427461 PSMD2Q13200 908 aa10.13□□□□□ -0.79
LSG1-202ENST00000427461 RUNX3Q13761 415 aa10.13□□□□□ -0.79
LSG1-202ENST00000427461 CAPSQ13938 189 aa10.13□□□□□ -0.79
LSG1-202ENST00000427461 GPR158Q5T848 1215 aa10.13□□□□□ -0.79
LSG1-202ENST00000427461 PCSK4Q6UW60 755 aa10.13□□□□□ -0.79
LSG1-202ENST00000427461 TOGARAM2Q6ZUX3 1019 aa10.13□□□□□ -0.79
LSG1-202ENST00000427461 C11orf74Q86VG3 221 aa10.13□□□□□ -0.79
LSG1-202ENST00000427461 TTC30AQ86WT1 665 aa10.13□□□□□ -0.79
LSG1-202ENST00000427461 SYT12Q8IV01 421 aa10.13□□□□□ -0.79
LSG1-202ENST00000427461 REXO1Q8N1G1 1221 aaKnown RBP10.13□□□□□ -0.79
LSG1-202ENST00000427461 TMTC2Q8N394 836 aa10.13□□□□□ -0.79
LSG1-202ENST00000427461 LEMD2Q8NC56 503 aa10.13□□□□□ -0.79
LSG1-202ENST00000427461 MDGA1Q8NFP4 955 aa10.13□□□□□ -0.79
LSG1-202ENST00000427461 TSTD1Q8NFU3 115 aa10.13□□□□□ -0.79
LSG1-202ENST00000427461 ASAP3Q8TDY4 903 aa10.13□□□□□ -0.79
LSG1-202ENST00000427461 RNF25Q96BH1 459 aaPredicted RBP10.13□□□□□ -0.79
LSG1-202ENST00000427461 FNBP1Q96RU3 617 aa10.13□□□□□ -0.79
LSG1-202ENST00000427461 DNAJC25Q9H1X3 360 aa10.13□□□□□ -0.79
LSG1-202ENST00000427461 EBF3Q9H4W6 596 aa10.13□□□□□ -0.79
LSG1-202ENST00000427461 PRORYQ9H606 182 aa10.13□□□□□ -0.79
LSG1-202ENST00000427461 POLMQ9NP87 494 aaPredicted RBP10.13□□□□□ -0.79
LSG1-202ENST00000427461 FBXL5Q9UKA1 691 aa10.13□□□□□ -0.79
LSG1-202ENST00000427461 ATMQ13315 3056 aa10.13□□□□□ -0.79
LSG1-202ENST00000427461 MUC22E2RYF6 1773 aaPredicted RBP10.12□□□□□ -0.79
LSG1-202ENST00000427461 HELZP42694 1942 aaKnown RBP10.12□□□□□ -0.79
LSG1-202ENST00000427461 CEP192Q8TEP8 1941 aa10.12□□□□□ -0.79
LSG1-202ENST00000427461 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.12□□□□□ -0.79
LSG1-202ENST00000427461 hCG_1984214I3L0E3 225 aa10.12□□□□□ -0.79
LSG1-202ENST00000427461 TNFRSF10BO14763 440 aa10.12□□□□□ -0.79
LSG1-202ENST00000427461 ARSAP15289 507 aa10.12□□□□□ -0.79
LSG1-202ENST00000427461 DRD1P21728 446 aa10.12□□□□□ -0.79
LSG1-202ENST00000427461 ITPKAP23677 461 aa10.12□□□□□ -0.79
LSG1-202ENST00000427461 RFC5P40937 340 aa10.12□□□□□ -0.79
LSG1-202ENST00000427461 LIFRP42702 1097 aa10.12□□□□□ -0.79
LSG1-202ENST00000427461 CFHR1Q03591 330 aa10.12□□□□□ -0.79
LSG1-202ENST00000427461 PCBP1Q15365 356 aaKnown RBP eCLIP10.12□□□□□ -0.79
LSG1-202ENST00000427461 UPP1Q16831 310 aa10.12□□□□□ -0.79
LSG1-202ENST00000427461 B4GALNT3Q6L9W6 998 aa10.12□□□□□ -0.79
LSG1-202ENST00000427461 RNF19BQ6ZMZ0 732 aa10.12□□□□□ -0.79
LSG1-202ENST00000427461 GAREM2Q75VX8 874 aa10.12□□□□□ -0.79
LSG1-202ENST00000427461 LPCAT2Q7L5N7 544 aa10.12□□□□□ -0.79
LSG1-202ENST00000427461 RASSF3Q86WH2 238 aa10.12□□□□□ -0.79
LSG1-202ENST00000427461 ZNF713Q8N859 430 aaPredicted RBP10.12□□□□□ -0.79
LSG1-202ENST00000427461 TCP11Q8WWU5 503 aa10.12□□□□□ -0.79
LSG1-202ENST00000427461 TMEM87BQ96K49 555 aa10.12□□□□□ -0.79
LSG1-202ENST00000427461 FAM83CQ9BQN1 747 aa10.12□□□□□ -0.79
LSG1-202ENST00000427461 CRISPLD1Q9H336 500 aa10.12□□□□□ -0.79
LSG1-202ENST00000427461 ATXN3LQ9H3M9 355 aa10.12□□□□□ -0.79
LSG1-202ENST00000427461 XPNPEP1Q9NQW7 623 aa10.12□□□□□ -0.79
LSG1-202ENST00000427461 PILRBQ9UKJ0 227 aa10.12□□□□□ -0.79
LSG1-202ENST00000427461 SLC6A14Q9UN76 642 aa10.12□□□□□ -0.79
LSG1-202ENST00000427461 USP20Q9Y2K6 914 aa10.12□□□□□ -0.79
LSG1-202ENST00000427461 YIPF1Q9Y548 306 aa10.12□□□□□ -0.79
LSG1-202ENST00000427461 PCDHB9Q9Y5E1 797 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms