RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 TKTP29401 623 aaKnown RBP7□□□□□ -1.29
SDCBP-203ENST00000424270 SFNP31947 248 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 IL12RB1P42701 662 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 MCM2P49736 904 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 RPL6Q02878 288 aaKnown RBP7□□□□□ -1.29
SDCBP-203ENST00000424270 CYP4A11Q02928 519 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 SLC14A1Q13336 389 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 AP3B2Q13367 1082 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 BYSLQ13895 437 aaKnown RBP7□□□□□ -1.29
SDCBP-203ENST00000424270 PREPLQ4J6C6 727 aaPredicted RBP7□□□□□ -1.29
SDCBP-203ENST00000424270 COLEC12Q5KU26 742 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 GPR158Q5T848 1215 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 PLA2G4FQ68DD2 849 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 TMPRSS7Q7RTY8 843 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 MIER3Q7Z3K6 550 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 SLCO6A1Q86UG4 719 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 RGL4Q8IZJ4 473 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 ZNF654Q8IZM8 581 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 SRBD1Q8N5C6 995 aaKnown RBP7□□□□□ -1.29
SDCBP-203ENST00000424270 CCDC26Q8TAB7 109 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 SHKBP1Q8TBC3 707 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 NXPE2Q96DL1 559 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 GCNAQ96QF7 691 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 TEKT3Q9BXF9 490 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 FAM117AQ9C073 453 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 EBF3Q9H4W6 596 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 MINDY3Q9H8M7 445 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 RIC8AQ9NPQ8 531 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 GKN1Q9NS71 199 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 KCNK4Q9NYG8 393 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 BACE2Q9Y5Z0 518 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 SHROOM3Q8TF72 1996 aa7□□□□□ -1.29
SDCBP-203ENST00000424270 BAZ2BQ9UIF8 2168 aaKnown RBP6.99□□□□□ -1.29
SDCBP-203ENST00000424270 FAM205CA6NFA0 338 aa6.99□□□□□ -1.29
SDCBP-203ENST00000424270 H7C4K7 107 aa6.99□□□□□ -1.29
SDCBP-203ENST00000424270 TRDMT1O14717 391 aaKnown RBP6.99□□□□□ -1.29
SDCBP-203ENST00000424270 AP5Z1O43299 807 aa6.99□□□□□ -1.29
SDCBP-203ENST00000424270 KRT38O76015 456 aa6.99□□□□□ -1.29
SDCBP-203ENST00000424270 SEC24AO95486 1093 aa6.99□□□□□ -1.29
SDCBP-203ENST00000424270 C6P13671 934 aa6.99□□□□□ -1.29
SDCBP-203ENST00000424270 ATF2P15336 505 aa6.99□□□□□ -1.29
SDCBP-203ENST00000424270 FGFR3P22607 806 aa6.99□□□□□ -1.29
SDCBP-203ENST00000424270 GALK1P51570 392 aa6.99□□□□□ -1.29
SDCBP-203ENST00000424270 EPHB3P54753 998 aa6.99□□□□□ -1.29
SDCBP-203ENST00000424270 LAMTOR4Q0VGL1 99 aa6.99□□□□□ -1.29
SDCBP-203ENST00000424270 PLD1Q13393 1074 aa6.99□□□□□ -1.29
SDCBP-203ENST00000424270 RUNX3Q13761 415 aa6.99□□□□□ -1.29
SDCBP-203ENST00000424270 TFDP1Q14186 410 aa6.99□□□□□ -1.29
SDCBP-203ENST00000424270 TAF12Q16514 161 aa6.99□□□□□ -1.29
SDCBP-203ENST00000424270 PLEKHG6Q3KR16 790 aa6.99□□□□□ -1.29
SDCBP-203ENST00000424270 C6orf132Q5T0Z8 1188 aa6.99□□□□□ -1.29
SDCBP-203ENST00000424270 STXBP5Q5T5C0 1151 aa6.99□□□□□ -1.29
SDCBP-203ENST00000424270 LRCH2Q5VUJ6 765 aa6.99□□□□□ -1.29
SDCBP-203ENST00000424270 SLC27A1Q6PCB7 646 aa6.99□□□□□ -1.29
SDCBP-203ENST00000424270 CASC1Q6TDU7 716 aa6.99□□□□□ -1.29
SDCBP-203ENST00000424270 CDR2LQ86X02 465 aaPredicted RBP6.99□□□□□ -1.29
SDCBP-203ENST00000424270 RAB11FIP4Q86YS3 637 aa6.99□□□□□ -1.29
SDCBP-203ENST00000424270 FMNL3Q8IVF7 1028 aa6.99□□□□□ -1.29
SDCBP-203ENST00000424270 HOMEZQ8IX15 550 aa6.99□□□□□ -1.29
SDCBP-203ENST00000424270 EXOC8Q8IYI6 725 aa6.99□□□□□ -1.29
SDCBP-203ENST00000424270 TCEAL8Q8IYN2 117 aa6.99□□□□□ -1.29
SDCBP-203ENST00000424270 CCDC33Q8N5R6 958 aa6.99□□□□□ -1.29
SDCBP-203ENST00000424270 MDGA1Q8NFP4 955 aa6.99□□□□□ -1.29
SDCBP-203ENST00000424270 NCOA7Q8NI08 942 aa6.99□□□□□ -1.29
SDCBP-203ENST00000424270 WHAMMQ8TF30 809 aa6.99□□□□□ -1.29
SDCBP-203ENST00000424270 TCP11Q8WWU5 503 aa6.99□□□□□ -1.29
SDCBP-203ENST00000424270 DDX27Q96GQ7 796 aaKnown RBP6.99□□□□□ -1.29
SDCBP-203ENST00000424270 CEP170P1Q96L14 293 aa6.99□□□□□ -1.29
SDCBP-203ENST00000424270 CNOT6LQ96LI5 555 aaKnown RBP6.99□□□□□ -1.29
SDCBP-203ENST00000424270 DSCC1Q9BVC3 393 aa6.99□□□□□ -1.29
SDCBP-203ENST00000424270 NIFKQ9BYG3 293 aaKnown RBP6.99□□□□□ -1.29
SDCBP-203ENST00000424270 CEP72Q9P209 647 aa6.99□□□□□ -1.29
SDCBP-203ENST00000424270 PILRBQ9UKJ0 227 aa6.99□□□□□ -1.29
SDCBP-203ENST00000424270 LAMA1P25391 3075 aa6.98□□□□□ -1.29
SDCBP-203ENST00000424270 USP9XQ93008 2570 aaPredicted RBP6.98□□□□□ -1.29
SDCBP-203ENST00000424270 IGKV6-21A0A0C4DH24 114 aa6.98□□□□□ -1.29
SDCBP-203ENST00000424270 PLK4O00444 970 aa6.98□□□□□ -1.29
SDCBP-203ENST00000424270 MARCH6O60337 910 aa6.98□□□□□ -1.29
SDCBP-203ENST00000424270 MOSPD3O75425 235 aa6.98□□□□□ -1.29
SDCBP-203ENST00000424270 SDSP20132 328 aa6.98□□□□□ -1.29
SDCBP-203ENST00000424270 HOXD12P35452 270 aa6.98□□□□□ -1.29
SDCBP-203ENST00000424270 ALDH1A3P47895 512 aa6.98□□□□□ -1.29
SDCBP-203ENST00000424270 CCDC173Q0VFZ6 552 aa6.98□□□□□ -1.29
SDCBP-203ENST00000424270 BFSP1Q12934 665 aa6.98□□□□□ -1.29
SDCBP-203ENST00000424270 LY6DQ14210 128 aa6.98□□□□□ -1.29
SDCBP-203ENST00000424270 TARBP2Q15633 366 aaKnown RBP6.98□□□□□ -1.29
SDCBP-203ENST00000424270 CTXN3Q4LDR2 81 aa6.98□□□□□ -1.29
SDCBP-203ENST00000424270 C4orf17Q53FE4 359 aa6.98□□□□□ -1.29
SDCBP-203ENST00000424270 C6orf118Q5T5N4 469 aa6.98□□□□□ -1.29
SDCBP-203ENST00000424270 ANKRD45Q5TZF3 282 aa6.98□□□□□ -1.29
SDCBP-203ENST00000424270 BROXQ5VW32 411 aa6.98□□□□□ -1.29
SDCBP-203ENST00000424270 WWC2Q6AWC2 1192 aa6.98□□□□□ -1.29
SDCBP-203ENST00000424270 TRIM68Q6AZZ1 485 aa6.98□□□□□ -1.29
SDCBP-203ENST00000424270 PPP1R18Q6NYC8 613 aa6.98□□□□□ -1.29
SDCBP-203ENST00000424270 CPA6Q8N4T0 437 aa6.98□□□□□ -1.29
SDCBP-203ENST00000424270 HMGB4Q8WW32 186 aa6.98□□□□□ -1.29
SDCBP-203ENST00000424270 CD101Q93033 1021 aa6.98□□□□□ -1.29
SDCBP-203ENST00000424270 CHFRQ96EP1 664 aa6.98□□□□□ -1.29
SDCBP-203ENST00000424270 SMG9Q9H0W8 520 aaKnown RBP6.98□□□□□ -1.29
SDCBP-203ENST00000424270 GLT8D2Q9H1C3 349 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms