RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 CARTPTQ16568 116 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 LONRF3Q496Y0 759 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 TCP11X2Q5H9J9 407 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 NOMO2Q5JPE7 1267 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 LRCH2Q5VUJ6 765 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 LUZP2Q86TE4 346 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 TTC7BQ86TV6 843 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 RPAP2Q8IXW5 612 aaPredicted RBP3.78□□□□□ -1.8
TOP2A-201ENST00000423485 MAPK15Q8TD08 544 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 SYTL5Q8TDW5 730 aaPredicted RBP3.78□□□□□ -1.8
TOP2A-201ENST00000423485 DENND1AQ8TEH3 1009 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 LRCH3Q96II8 777 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 UBL7Q96S82 380 aaPredicted RBP3.78□□□□□ -1.8
TOP2A-201ENST00000423485 ILKAPQ9H0C8 392 aaPredicted RBP3.78□□□□□ -1.8
TOP2A-201ENST00000423485 NUP62CLQ9H1M0 184 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 RASSF4Q9H2L5 321 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.78□□□□□ -1.8
TOP2A-201ENST00000423485 CGNQ9P2M7 1197 aaKnown RBP3.78□□□□□ -1.8
TOP2A-201ENST00000423485 DNMT3LQ9UJW3 386 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 ZNF510Q9Y2H8 683 aa3.78□□□□□ -1.8
TOP2A-201ENST00000423485 CCL16O15467 120 aa3.78□□□□□ -1.81
TOP2A-201ENST00000423485 CYP27B1O15528 508 aa3.78□□□□□ -1.81
TOP2A-201ENST00000423485 DHX15O43143 795 aaKnown RBP3.78□□□□□ -1.81
TOP2A-201ENST00000423485 ZBTB43O43298 467 aa3.78□□□□□ -1.81
TOP2A-201ENST00000423485 N4BP1O75113 896 aaKnown RBP3.78□□□□□ -1.81
TOP2A-201ENST00000423485 PSIP1O75475 530 aaKnown RBP3.78□□□□□ -1.81
TOP2A-201ENST00000423485 PAPSS2O95340 614 aaPredicted RBP3.78□□□□□ -1.81
TOP2A-201ENST00000423485 STAMBPO95630 424 aa3.78□□□□□ -1.81
TOP2A-201ENST00000423485 MPOP05164 745 aa3.78□□□□□ -1.81
TOP2A-201ENST00000423485 KCNJ5P48544 419 aa3.78□□□□□ -1.81
TOP2A-201ENST00000423485 OAZ1P54368 228 aa3.78□□□□□ -1.81
TOP2A-201ENST00000423485 DDR1Q08345 913 aa3.78□□□□□ -1.81
TOP2A-201ENST00000423485 CUL4AQ13619 759 aa3.78□□□□□ -1.81
TOP2A-201ENST00000423485 PRPSAP1Q14558 356 aa3.78□□□□□ -1.81
TOP2A-201ENST00000423485 MXD4Q14582 209 aaPredicted RBP3.78□□□□□ -1.81
TOP2A-201ENST00000423485 SV2CQ496J9 727 aa3.78□□□□□ -1.81
TOP2A-201ENST00000423485 DNAJC21Q5F1R6 531 aaKnown RBP3.78□□□□□ -1.81
TOP2A-201ENST00000423485 NFRKBQ6P4R8 1299 aa3.78□□□□□ -1.81
TOP2A-201ENST00000423485 CYP26C1Q6V0L0 522 aa3.78□□□□□ -1.81
TOP2A-201ENST00000423485 KCTD1Q719H9 257 aa3.78□□□□□ -1.81
TOP2A-201ENST00000423485 PHACTR4Q8IZ21 702 aa3.78□□□□□ -1.81
TOP2A-201ENST00000423485 ABRAQ8N0Z2 381 aa3.78□□□□□ -1.81
TOP2A-201ENST00000423485 LCORLQ8N3X6 602 aa3.78□□□□□ -1.81
TOP2A-201ENST00000423485 DNERQ8NFT8 737 aa3.78□□□□□ -1.81
TOP2A-201ENST00000423485 SNX21Q969T3 373 aa3.78□□□□□ -1.81
TOP2A-201ENST00000423485 ATG4CQ96DT6 458 aa3.78□□□□□ -1.81
TOP2A-201ENST00000423485 ZDHHC5Q9C0B5 715 aa3.78□□□□□ -1.81
TOP2A-201ENST00000423485 VPS37BQ9H9H4 285 aa3.78□□□□□ -1.81
TOP2A-201ENST00000423485 EPB41L5Q9HCM4 733 aa3.78□□□□□ -1.81
TOP2A-201ENST00000423485 KCND1Q9NSA2 647 aa3.78□□□□□ -1.81
TOP2A-201ENST00000423485 SRPK3Q9UPE1 567 aa3.78□□□□□ -1.81
TOP2A-201ENST00000423485 DIS3Q9Y2L1 958 aaKnown RBP3.78□□□□□ -1.81
TOP2A-201ENST00000423485 FAM169AQ9Y6X4 670 aa3.78□□□□□ -1.81
TOP2A-201ENST00000423485 WNK3Q9BYP7 1800 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 FAM170AA1A519 330 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 FAM205CA6NFA0 338 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 PSMD12O00232 456 aaPredicted RBP3.77□□□□□ -1.81
TOP2A-201ENST00000423485 LILRB3O75022 631 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 EIF3JO75822 258 aaKnown RBP3.77□□□□□ -1.81
TOP2A-201ENST00000423485 WFS1O76024 890 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 RETP07949 1114 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 PRPF4BQ13523 1007 aaKnown RBP3.77□□□□□ -1.81
TOP2A-201ENST00000423485 RCN2Q14257 317 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 POLD3Q15054 466 aaPredicted RBP3.77□□□□□ -1.81
TOP2A-201ENST00000423485 PSMD5Q16401 504 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 CYP2A13Q16696 494 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 LRIT3Q3SXY7 679 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 KLHL22Q53GT1 634 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 PSAPL1Q6NUJ1 521 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 AGMOQ6ZNB7 445 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 GPR155Q7Z3F1 870 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 CPLX4Q7Z7G2 160 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 DGKHQ86XP1 1220 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 FBXO16Q8IX29 292 aaPredicted RBP3.77□□□□□ -1.81
TOP2A-201ENST00000423485 MYCBPAPQ8TBZ2 947 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 DDI1Q8WTU0 396 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 TNIP3Q96KP6 325 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 LRFN3Q9BTN0 628 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 MUC3BQ9H195 1237 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 SAMD15Q9P1V8 674 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 SUCLA2Q9P2R7 463 aaPredicted RBP3.77□□□□□ -1.81
TOP2A-201ENST00000423485 PCDHA8Q9Y5H6 950 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 ZMYM2Q9UBW7 1377 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 PARP4Q9UKK3 1724 aaKnown RBP3.77□□□□□ -1.81
TOP2A-201ENST00000423485 ITIH6Q6UXX5 1313 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 A0A087WZ62 844 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 GOLGA6L19H0YKK7 550 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 BIN1O00499 593 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 SOX1O00570 391 aaPredicted RBP3.77□□□□□ -1.81
TOP2A-201ENST00000423485 PRPF4O43172 522 aaKnown RBP eCLIP3.77□□□□□ -1.81
TOP2A-201ENST00000423485 PPFIA4O75335 1185 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 CHRNA1P02708 482 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 TGM2P21980 687 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 CCND3P30281 292 aaPredicted RBP3.77□□□□□ -1.81
TOP2A-201ENST00000423485 RRADP55042 308 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 SEC13P55735 322 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 KRT83P78385 493 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 TMEM62Q0P6H9 643 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 BAATQ14032 418 aaPredicted RBP3.77□□□□□ -1.81
TOP2A-201ENST00000423485 PRR16Q569H4 304 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms