RNA–Protein interactions for RNA: ENST00000421689.6

CAST-208, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-208ENST00000421689 GBP6Q6ZN66 633 aa12.68□□□□□ -0.38
CAST-208ENST00000421689 DDX53Q86TM3 631 aaKnown RBP12.68□□□□□ -0.38
CAST-208ENST00000421689 TMEM173Q86WV6 379 aaPredicted RBP12.68□□□□□ -0.38
CAST-208ENST00000421689 KLHL23Q8NBE8 558 aa12.68□□□□□ -0.38
CAST-208ENST00000421689 HASPINQ8TF76 798 aa12.68□□□□□ -0.38
CAST-208ENST00000421689 SEMA4DQ92854 862 aa12.68□□□□□ -0.38
CAST-208ENST00000421689 C11orf84Q9BUA3 381 aaPredicted RBP12.68□□□□□ -0.38
CAST-208ENST00000421689 XYLT2Q9H1B5 865 aa12.68□□□□□ -0.38
CAST-208ENST00000421689 VRTNQ9H8Y1 702 aa12.68□□□□□ -0.38
CAST-208ENST00000421689 STK39Q9UEW8 545 aa12.68□□□□□ -0.38
CAST-208ENST00000421689 MTUS1Q9ULD2 1270 aa12.68□□□□□ -0.38
CAST-208ENST00000421689 SF3B1O75533 1304 aaKnown RBP eCLIP12.67□□□□□ -0.387e-6■■■■■ 52.4
CAST-208ENST00000421689 TMEM265A0A087WTH1 108 aa12.67□□□□□ -0.38
CAST-208ENST00000421689 A0A1B0GTH6 734 aa12.67□□□□□ -0.38
CAST-208ENST00000421689 ARHGEF37A1IGU5 675 aa12.67□□□□□ -0.38
CAST-208ENST00000421689 LGALS16A8MUM7 142 aa12.67□□□□□ -0.38
CAST-208ENST00000421689 M0QZQ0 153 aa12.67□□□□□ -0.38
CAST-208ENST00000421689 SPTLC1O15269 473 aa12.67□□□□□ -0.38
CAST-208ENST00000421689 BRCC3P46736 316 aa12.67□□□□□ -0.38
CAST-208ENST00000421689 AARSP49588 968 aaKnown RBP eCLIP12.67□□□□□ -0.38
CAST-208ENST00000421689 UBASH3AP57075 661 aa12.67□□□□□ -0.38
CAST-208ENST00000421689 TNNC1P63316 161 aa12.67□□□□□ -0.38
CAST-208ENST00000421689 UBXN1Q04323 297 aa12.67□□□□□ -0.38
CAST-208ENST00000421689 UBE3AQ05086 875 aa12.67□□□□□ -0.38
CAST-208ENST00000421689 EXOC3L4Q17RC7 722 aa12.67□□□□□ -0.38
CAST-208ENST00000421689 UVSSAQ2YD98 709 aa12.67□□□□□ -0.38
CAST-208ENST00000421689 WDR72Q3MJ13 1102 aa12.67□□□□□ -0.38
CAST-208ENST00000421689 TIGD5Q53EQ6 642 aa12.67□□□□□ -0.38
CAST-208ENST00000421689 ZNF667Q5HYK9 610 aa12.67□□□□□ -0.38
CAST-208ENST00000421689 WDR44Q5JSH3 913 aa12.67□□□□□ -0.38
CAST-208ENST00000421689 FUT10Q6P4F1 479 aa12.67□□□□□ -0.38
CAST-208ENST00000421689 SPRED2Q7Z698 418 aa12.67□□□□□ -0.38
CAST-208ENST00000421689 FBXO22Q8NEZ5 403 aa12.67□□□□□ -0.38
CAST-208ENST00000421689 BCL7CQ8WUZ0 217 aaPredicted RBP12.67□□□□□ -0.38
CAST-208ENST00000421689 SUSD3Q96L08 255 aa12.67□□□□□ -0.38
CAST-208ENST00000421689 PI4K2AQ9BTU6 479 aa12.67□□□□□ -0.38
CAST-208ENST00000421689 GPR62Q9BZJ7 368 aa12.67□□□□□ -0.38
CAST-208ENST00000421689 RTN4Q9NQC3 1192 aaKnown RBP12.67□□□□□ -0.38
CAST-208ENST00000421689 GDAP2Q9NXN4 497 aa12.67□□□□□ -0.38
CAST-208ENST00000421689 GCNT4Q9P109 453 aa12.67□□□□□ -0.38
CAST-208ENST00000421689 PUF60Q9UHX1 559 aaKnown RBP12.67□□□□□ -0.38
CAST-208ENST00000421689 LZTS1Q9Y250 596 aa12.67□□□□□ -0.38
CAST-208ENST00000421689 SNX9Q9Y5X1 595 aa12.67□□□□□ -0.38
CAST-208ENST00000421689 LAMA2P24043 3122 aaKnown RBP12.66□□□□□ -0.38
CAST-208ENST00000421689 H3BNC9 293 aa12.66□□□□□ -0.38
CAST-208ENST00000421689 CYB561D2O14569 222 aa12.66□□□□□ -0.38
CAST-208ENST00000421689 SYN3O14994 580 aa12.66□□□□□ -0.38
CAST-208ENST00000421689 LRRN2O75325 713 aa12.66□□□□□ -0.38
CAST-208ENST00000421689 EFEMP2O95967 443 aa12.66□□□□□ -0.38
CAST-208ENST00000421689 SOD2P04179 222 aa12.66□□□□□ -0.38
CAST-208ENST00000421689 ODC1P11926 461 aa12.66□□□□□ -0.38
CAST-208ENST00000421689 P4HA1P13674 534 aa12.66□□□□□ -0.38
CAST-208ENST00000421689 NOP14P78316 857 aaKnown RBP12.66□□□□□ -0.38
CAST-208ENST00000421689 GPM6BQ13491 265 aa12.66□□□□□ -0.38
CAST-208ENST00000421689 NR1I3Q14994 352 aa12.66□□□□□ -0.38
CAST-208ENST00000421689 USP41Q3LFD5 358 aa12.66□□□□□ -0.38
CAST-208ENST00000421689 FAM171A1Q5VUB5 890 aa12.66□□□□□ -0.38
CAST-208ENST00000421689 DPH6Q7L8W6 267 aa12.66□□□□□ -0.38
CAST-208ENST00000421689 RNF168Q8IYW5 571 aaPredicted RBP12.66□□□□□ -0.38
CAST-208ENST00000421689 TOP6BLQ8N6T0 577 aa12.66□□□□□ -0.38
CAST-208ENST00000421689 LMO3Q8TAP4 145 aa12.66□□□□□ -0.38
CAST-208ENST00000421689 ARNTL2Q8WYA1 636 aa12.66□□□□□ -0.38
CAST-208ENST00000421689 FAXDC2Q96IV6 333 aa12.66□□□□□ -0.38
CAST-208ENST00000421689 SENP8Q96LD8 212 aa12.66□□□□□ -0.38
CAST-208ENST00000421689 NAP1L5Q96NT1 182 aaPredicted RBP12.66□□□□□ -0.38
CAST-208ENST00000421689 CRACR2AQ9BSW2 395 aa12.66□□□□□ -0.38
CAST-208ENST00000421689 INTS2Q9H0H0 1204 aaKnown RBP12.66□□□□□ -0.38
CAST-208ENST00000421689 ZNF576Q9H609 170 aa12.66□□□□□ -0.38
CAST-208ENST00000421689 CERS4Q9HA82 394 aa12.66□□□□□ -0.38
CAST-208ENST00000421689 NXF1Q9UBU9 619 aaKnown RBP12.66□□□□□ -0.38
CAST-208ENST00000421689 DSEQ9UL01 958 aa12.66□□□□□ -0.38
CAST-208ENST00000421689 PCDHB8Q9UN66 801 aa12.66□□□□□ -0.38
CAST-208ENST00000421689 RANBP2P49792 3224 aaKnown RBP12.66□□□□□ -0.38
CAST-208ENST00000421689 I3L4J1 428 aa12.65□□□□□ -0.38
CAST-208ENST00000421689 CBFA2T2O43439 604 aa12.65□□□□□ -0.38
CAST-208ENST00000421689 HUS1O60921 280 aa12.65□□□□□ -0.38
CAST-208ENST00000421689 TPM3P06753 285 aa12.65□□□□□ -0.38
CAST-208ENST00000421689 FAM163BP0C2L3 166 aa12.65□□□□□ -0.38
CAST-208ENST00000421689 SLC9A1P19634 815 aa12.65□□□□□ -0.38
CAST-208ENST00000421689 TYMPP19971 482 aa12.65□□□□□ -0.38
CAST-208ENST00000421689 PON1P27169 355 aa12.65□□□□□ -0.38
CAST-208ENST00000421689 KCNMA1Q12791 1236 aa12.65□□□□□ -0.38
CAST-208ENST00000421689 SPOPLQ6IQ16 392 aa12.65□□□□□ -0.38
CAST-208ENST00000421689 TRIM65Q6PJ69 517 aa12.65□□□□□ -0.38
CAST-208ENST00000421689 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.65□□□□□ -0.38
CAST-208ENST00000421689 METTL23Q86XA0 190 aa12.65□□□□□ -0.38
CAST-208ENST00000421689 VPS52Q8N1B4 723 aa12.65□□□□□ -0.38
CAST-208ENST00000421689 APPL2Q8NEU8 664 aa12.65□□□□□ -0.38
CAST-208ENST00000421689 SPPL3Q8TCT6 385 aa12.65□□□□□ -0.38
CAST-208ENST00000421689 TATDN2Q93075 761 aa12.65□□□□□ -0.38
CAST-208ENST00000421689 NT5C1BQ96P26 610 aa12.65□□□□□ -0.38
CAST-208ENST00000421689 ERGIC2Q96RQ1 377 aa12.65□□□□□ -0.38
CAST-208ENST00000421689 MMS19Q96T76 1030 aa12.65□□□□□ -0.38
CAST-208ENST00000421689 HERC2P3Q9BVR0 1158 aa12.65□□□□□ -0.38
CAST-208ENST00000421689 VN1R3Q9BXE9 311 aa12.65□□□□□ -0.38
CAST-208ENST00000421689 APOBEC3GQ9HC16 384 aaKnown RBP12.65□□□□□ -0.38
CAST-208ENST00000421689 ALG13Q9NP73 1137 aaKnown RBP12.65□□□□□ -0.38
CAST-208ENST00000421689 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.65□□□□□ -0.388e-7■■■■■ 104.9
CAST-208ENST00000421689 IFNKQ9P0W0 207 aa12.65□□□□□ -0.38
CAST-208ENST00000421689 VWA8A3KMH1 1905 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms