RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 DERAQ9Y315 318 aa9.66□□□□□ -0.86
LINCMD1-201ENST00000418518 PCDHA3Q9Y5H8 950 aa9.66□□□□□ -0.86
LINCMD1-201ENST00000418518 TLL2Q9Y6L7 1015 aa9.66□□□□□ -0.86
LINCMD1-201ENST00000418518 TCRBV5S1A1TA0A578 114 aa9.65□□□□□ -0.86
LINCMD1-201ENST00000418518 KRIT1O00522 736 aa9.65□□□□□ -0.86
LINCMD1-201ENST00000418518 SART1O43290 800 aaKnown RBP9.65□□□□□ -0.86
LINCMD1-201ENST00000418518 THAP12O43422 761 aa9.65□□□□□ -0.86
LINCMD1-201ENST00000418518 CALCAP01258 141 aa9.65□□□□□ -0.86
LINCMD1-201ENST00000418518 FGGP02679 453 aa9.65□□□□□ -0.86
LINCMD1-201ENST00000418518 MMP8P22894 467 aa9.65□□□□□ -0.86
LINCMD1-201ENST00000418518 RRM1P23921 792 aa9.65□□□□□ -0.86
LINCMD1-201ENST00000418518 AXLP30530 894 aa9.65□□□□□ -0.86
LINCMD1-201ENST00000418518 MARCKSL1P49006 195 aa9.65□□□□□ -0.86
LINCMD1-201ENST00000418518 PSEN2P49810 448 aa9.65□□□□□ -0.86
LINCMD1-201ENST00000418518 CPT1AP50416 773 aa9.65□□□□□ -0.86
LINCMD1-201ENST00000418518 NKX3-2P78367 333 aa9.65□□□□□ -0.86
LINCMD1-201ENST00000418518 CBX1P83916 185 aa9.65□□□□□ -0.86
LINCMD1-201ENST00000418518 SREBF2Q12772 1141 aa9.65□□□□□ -0.86
LINCMD1-201ENST00000418518 PAK2Q13177 524 aa9.65□□□□□ -0.86
LINCMD1-201ENST00000418518 CUL1Q13616 776 aa9.65□□□□□ -0.86
LINCMD1-201ENST00000418518 MESDQ14696 234 aa9.65□□□□□ -0.86
LINCMD1-201ENST00000418518 MFSD10Q14728 455 aa9.65□□□□□ -0.86
LINCMD1-201ENST00000418518 CYP1B1Q16678 543 aa9.65□□□□□ -0.86
LINCMD1-201ENST00000418518 TMEM132AQ24JP5 1023 aa9.65□□□□□ -0.86
LINCMD1-201ENST00000418518 LIN9Q5TKA1 542 aa9.65□□□□□ -0.86
LINCMD1-201ENST00000418518 JADE1Q6IE81 842 aa9.65□□□□□ -0.86
LINCMD1-201ENST00000418518 C12orf50Q8NA57 414 aaPredicted RBP9.65□□□□□ -0.86
LINCMD1-201ENST00000418518 NLRP7Q8WX94 980 aa9.65□□□□□ -0.86
LINCMD1-201ENST00000418518 ZNF606Q8WXB4 792 aa9.65□□□□□ -0.86
LINCMD1-201ENST00000418518 KRT35Q92764 455 aa9.65□□□□□ -0.86
LINCMD1-201ENST00000418518 CYFIP2Q96F07 1278 aa9.65□□□□□ -0.86
LINCMD1-201ENST00000418518 HHIPL1Q96JK4 782 aa9.65□□□□□ -0.86
LINCMD1-201ENST00000418518 TSPAN18Q96SJ8 248 aa9.65□□□□□ -0.86
LINCMD1-201ENST00000418518 ADPGKQ9BRR6 497 aa9.65□□□□□ -0.86
LINCMD1-201ENST00000418518 ACBD3Q9H3P7 528 aa9.65□□□□□ -0.86
LINCMD1-201ENST00000418518 PLEKHA5Q9HAU0 1116 aa9.65□□□□□ -0.86
LINCMD1-201ENST00000418518 ZFYVE28Q9HCC9 887 aa9.65□□□□□ -0.86
LINCMD1-201ENST00000418518 SETD4Q9NVD3 440 aa9.65□□□□□ -0.86
LINCMD1-201ENST00000418518 ITGA11Q9UKX5 1188 aa9.65□□□□□ -0.86
LINCMD1-201ENST00000418518 HPCAL4Q9UM19 191 aa9.65□□□□□ -0.86
LINCMD1-201ENST00000418518 SCINQ9Y6U3 715 aa9.65□□□□□ -0.86
LINCMD1-201ENST00000418518 FRMPD3Q5JV73 1810 aa9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 H3BQF6 201 aa9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 TULP1O00294 542 aaPredicted RBP9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 DYNC1LI2O43237 492 aaPredicted RBP9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 PSTPIP1O43586 416 aa9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 SPOPO43791 374 aa9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 PHF2O75151 1096 aa9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 ZMYND10O75800 440 aa9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 PROSCO94903 275 aa9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 ERLIN2O94905 339 aa9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 CALB1P05937 261 aa9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 CFHP08603 1231 aa9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 ITGA4P13612 1032 aa9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 DARSP14868 501 aaKnown RBP9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 EIF4BP23588 611 aaKnown RBP9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 HOXA11P31270 313 aaPredicted RBP9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 TM4SF4P48230 202 aa9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 SLC7A5Q01650 507 aa9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 INCA1Q0VD86 236 aa9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 DHX34Q14147 1143 aaKnown RBP9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 SMC1AQ14683 1233 aaKnown RBP9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 TMEM132DQ14C87 1099 aa9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 CCL14Q16627 93 aa9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 PTPROQ16827 1216 aa9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 ZNF667Q5HYK9 610 aa9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 SEL1L2Q5TEA6 688 aa9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 MAATS1Q7Z4T9 603 aa9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 CDR2LQ86X02 465 aaPredicted RBP9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 TTC39CQ8N584 583 aa9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 CCDC26Q8TAB7 109 aa9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 WHAMMQ8TF30 809 aa9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 CASKIN2Q8WXE0 1202 aa9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 CPA5Q8WXQ8 436 aa9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 FAM212AQ96EL1 285 aa9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 CPB2Q96IY4 423 aa9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 KATNAL1Q9BW62 490 aa9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 GCOM2Q9BZD3 368 aaPredicted RBP9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 UPF3AQ9H1J1 476 aaKnown RBP9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 LHX5Q9H2C1 402 aa9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 MRPL47Q9HD33 250 aaKnown RBP9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 MED4Q9NPJ6 270 aa9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 ADAM22Q9P0K1 906 aa9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 ANAPC7Q9UJX3 599 aa9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 THSD7BQ9C0I4 1608 aa9.64□□□□□ -0.87
LINCMD1-201ENST00000418518 GOLGA6L10A0A0M3HER8 536 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 FAM187AA6NFU0 413 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 FSCN2O14926 492 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 CA12O43570 354 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 KPNA6O60684 536 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 CILPO75339 1184 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 CSDE1O75534 798 aaKnown RBP9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 ITGB3P05106 788 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 CYP2C9P11712 490 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 P4HA1P13674 534 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 BRD2P25440 801 aaKnown RBP9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 OAS2P29728 719 aaKnown RBP9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 ECHS1P30084 290 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 CHRNA3P32297 505 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 CYP2C19P33261 490 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms