RNA–Protein interactions for RNA: ENST00000417440.2

CASP4-202, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-202ENST00000417440 USP18Q9UMW8 372 aa7.94□□□□□ -1.14
CASP4-202ENST00000417440 ZMYM2Q9UBW7 1377 aa7.94□□□□□ -1.14
CASP4-202ENST00000417440 SMIM28A0A1B0GU29 152 aa7.93□□□□□ -1.14
CASP4-202ENST00000417440 PODXLO00592 558 aa7.93□□□□□ -1.14
CASP4-202ENST00000417440 ECI2O75521 394 aa7.93□□□□□ -1.14
CASP4-202ENST00000417440 SEC24AO95486 1093 aa7.93□□□□□ -1.14
CASP4-202ENST00000417440 OR52Z1P0C646 297 aa7.93□□□□□ -1.14
CASP4-202ENST00000417440 MYL4P12829 197 aa7.93□□□□□ -1.14
CASP4-202ENST00000417440 GJA1P17302 382 aa7.93□□□□□ -1.14
CASP4-202ENST00000417440 VARSP26640 1264 aaKnown RBP7.93□□□□□ -1.14
CASP4-202ENST00000417440 CCT6AP40227 531 aaKnown RBP7.93□□□□□ -1.14
CASP4-202ENST00000417440 EFNA5P52803 228 aa7.93□□□□□ -1.14
CASP4-202ENST00000417440 PEX3P56589 373 aa7.93□□□□□ -1.14
CASP4-202ENST00000417440 ROR1Q01973 937 aa7.93□□□□□ -1.14
CASP4-202ENST00000417440 SOX4Q06945 474 aaPredicted RBP7.93□□□□□ -1.14
CASP4-202ENST00000417440 MTAPQ13126 283 aa7.93□□□□□ -1.14
CASP4-202ENST00000417440 GNL2Q13823 731 aaKnown RBP7.93□□□□□ -1.14
CASP4-202ENST00000417440 ECM1Q16610 540 aa7.93□□□□□ -1.14
CASP4-202ENST00000417440 ZNF528Q3MIS6 628 aa7.93□□□□□ -1.14
CASP4-202ENST00000417440 ZNF568Q3ZCX4 644 aa7.93□□□□□ -1.14
CASP4-202ENST00000417440 FAM78AQ5JUQ0 283 aa7.93□□□□□ -1.14
CASP4-202ENST00000417440 CYP4A22Q5TCH4 519 aa7.93□□□□□ -1.14
CASP4-202ENST00000417440 CD300LGQ6UXG3 332 aa7.93□□□□□ -1.14
CASP4-202ENST00000417440 PDZD4Q76G19 769 aaPredicted RBP7.93□□□□□ -1.14
CASP4-202ENST00000417440 C18orf25Q96B23 403 aaPredicted RBP7.93□□□□□ -1.14
CASP4-202ENST00000417440 UROC1Q96N76 676 aa7.93□□□□□ -1.14
CASP4-202ENST00000417440 PPP1R10Q96QC0 940 aaKnown RBP7.93□□□□□ -1.14
CASP4-202ENST00000417440 NELL2Q99435 816 aa7.93□□□□□ -1.14
CASP4-202ENST00000417440 TCHPQ9BT92 498 aa7.93□□□□□ -1.14
CASP4-202ENST00000417440 BHMT2Q9H2M3 363 aa7.93□□□□□ -1.14
CASP4-202ENST00000417440 ZFP14Q9HCL3 533 aa7.93□□□□□ -1.14
CASP4-202ENST00000417440 ZSCAN32Q9NX65 697 aa7.93□□□□□ -1.14
CASP4-202ENST00000417440 DLL3Q9NYJ7 618 aa7.93□□□□□ -1.14
CASP4-202ENST00000417440 SMG5Q9UPR3 1016 aaKnown RBP7.93□□□□□ -1.14
CASP4-202ENST00000417440 KIAA1024Q9UPX6 916 aa7.93□□□□□ -1.14
CASP4-202ENST00000417440 MRPS17Q9Y2R5 130 aaKnown RBP7.93□□□□□ -1.14
CASP4-202ENST00000417440 NUB1Q9Y5A7 615 aa7.93□□□□□ -1.14
CASP4-202ENST00000417440 PCDHGA2Q9Y5H1 932 aa7.93□□□□□ -1.14
CASP4-202ENST00000417440 BACE2Q9Y5Z0 518 aa7.93□□□□□ -1.14
CASP4-202ENST00000417440 WDR27A2RRH5 827 aa7.92□□□□□ -1.14
CASP4-202ENST00000417440 DCDC2BA2VCK2 349 aa7.92□□□□□ -1.14
CASP4-202ENST00000417440 TMEM189-UBE2V1I3L0A0 370 aa7.92□□□□□ -1.14
CASP4-202ENST00000417440 NRG2O14511 850 aaPredicted RBP7.92□□□□□ -1.14
CASP4-202ENST00000417440 ZNF197O14709 1029 aa7.92□□□□□ -1.14
CASP4-202ENST00000417440 RPA1P27694 616 aa7.92□□□□□ -1.14
CASP4-202ENST00000417440 GDI1P31150 447 aa7.92□□□□□ -1.14
CASP4-202ENST00000417440 MCM4P33991 863 aa7.92□□□□□ -1.14
CASP4-202ENST00000417440 VIPR2P41587 438 aa7.92□□□□□ -1.14
CASP4-202ENST00000417440 CCR2P41597 374 aa7.92□□□□□ -1.14
CASP4-202ENST00000417440 NEK4P51957 841 aa7.92□□□□□ -1.14
CASP4-202ENST00000417440 ATXN1P54253 815 aaKnown RBP7.92□□□□□ -1.14
CASP4-202ENST00000417440 ADCY1Q08828 1119 aa7.92□□□□□ -1.14
CASP4-202ENST00000417440 TWF1Q12792 350 aa7.92□□□□□ -1.14
CASP4-202ENST00000417440 ZRSR1Q15695 479 aaKnown RBP7.92□□□□□ -1.14
CASP4-202ENST00000417440 CTXN3Q4LDR2 81 aa7.92□□□□□ -1.14
CASP4-202ENST00000417440 SEZ6Q53EL9 994 aa7.92□□□□□ -1.14
CASP4-202ENST00000417440 TTC38Q5R3I4 469 aa7.92□□□□□ -1.14
CASP4-202ENST00000417440 IQCEQ6IPM2 695 aa7.92□□□□□ -1.14
CASP4-202ENST00000417440 PRR23BQ6ZRT6 265 aa7.92□□□□□ -1.14
CASP4-202ENST00000417440 APBB1IPQ7Z5R6 666 aaPredicted RBP7.92□□□□□ -1.14
CASP4-202ENST00000417440 ZNF461Q8TAF7 563 aa7.92□□□□□ -1.14
CASP4-202ENST00000417440 TTC8Q8TAM2 541 aa7.92□□□□□ -1.14
CASP4-202ENST00000417440 FAM3CQ92520 227 aa7.92□□□□□ -1.14
CASP4-202ENST00000417440 KIFAP3Q92845 792 aa7.92□□□□□ -1.14
CASP4-202ENST00000417440 CLDN23Q96B33 292 aa7.92□□□□□ -1.14
CASP4-202ENST00000417440 ELSPBP1Q96BH3 223 aa7.92□□□□□ -1.14
CASP4-202ENST00000417440 C8orf76Q96K31 380 aa7.92□□□□□ -1.14
CASP4-202ENST00000417440 ZNF512Q96ME7 567 aaPredicted RBP7.92□□□□□ -1.14
CASP4-202ENST00000417440 ZSWIM3Q96MP5 696 aa7.92□□□□□ -1.14
CASP4-202ENST00000417440 ZMAT2Q96NC0 199 aaKnown RBP7.92□□□□□ -1.14
CASP4-202ENST00000417440 CNTNAP3BQ96NU0 1288 aa7.92□□□□□ -1.14
CASP4-202ENST00000417440 TRMT61BQ9BVS5 477 aaKnown RBP7.92□□□□□ -1.14
CASP4-202ENST00000417440 TARS2Q9BW92 718 aaKnown RBP7.92□□□□□ -1.14
CASP4-202ENST00000417440 CNTNAP3Q9BZ76 1288 aa7.92□□□□□ -1.14
CASP4-202ENST00000417440 OSBPL6Q9BZF3 934 aa7.92□□□□□ -1.14
CASP4-202ENST00000417440 CDT1Q9H211 546 aa7.92□□□□□ -1.14
CASP4-202ENST00000417440 SLITRK6Q9H5Y7 841 aa7.92□□□□□ -1.14
CASP4-202ENST00000417440 LMAN1LQ9HAT1 526 aa7.92□□□□□ -1.14
CASP4-202ENST00000417440 TOPORSQ9NS56 1045 aaPredicted RBP7.92□□□□□ -1.14
CASP4-202ENST00000417440 DDX19AQ9NUU7 478 aaKnown RBP7.92□□□□□ -1.14
CASP4-202ENST00000417440 GDE1Q9NZC3 331 aa7.92□□□□□ -1.14
CASP4-202ENST00000417440 FBXL5Q9UKA1 691 aa7.92□□□□□ -1.14
CASP4-202ENST00000417440 CDV3Q9UKY7 258 aaKnown RBP7.92□□□□□ -1.14
CASP4-202ENST00000417440 RAB23Q9ULC3 237 aa7.92□□□□□ -1.14
CASP4-202ENST00000417440 TNFSF13BQ9Y275 285 aa7.92□□□□□ -1.14
CASP4-202ENST00000417440 PCDHB9Q9Y5E1 797 aa7.92□□□□□ -1.14
CASP4-202ENST00000417440 ARHGEF37A1IGU5 675 aa7.91□□□□□ -1.14
CASP4-202ENST00000417440 SFI1A8K8P3 1242 aa7.91□□□□□ -1.14
CASP4-202ENST00000417440 E9PMD0 336 aa7.91□□□□□ -1.14
CASP4-202ENST00000417440 H7C4K7 107 aa7.91□□□□□ -1.14
CASP4-202ENST00000417440 MAN2B1O00754 1011 aa7.91□□□□□ -1.14
CASP4-202ENST00000417440 HIP1RO75146 1068 aa7.91□□□□□ -1.14
CASP4-202ENST00000417440 POU2F2P09086 479 aa7.91□□□□□ -1.14
CASP4-202ENST00000417440 CPB1P15086 417 aa7.91□□□□□ -1.14
CASP4-202ENST00000417440 ATF2P15336 505 aa7.91□□□□□ -1.14
CASP4-202ENST00000417440 FCARP24071 287 aa7.91□□□□□ -1.14
CASP4-202ENST00000417440 CCNE1P24864 410 aa7.91□□□□□ -1.14
CASP4-202ENST00000417440 MARCKSP29966 332 aaPredicted RBP7.91□□□□□ -1.14
CASP4-202ENST00000417440 GRM5P41594 1212 aa7.91□□□□□ -1.14
CASP4-202ENST00000417440 MATR3P43243 847 aaKnown RBP eCLIP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms