RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 KPNA6O60684 536 aa20.53■□□□□ 0.88
RAB3IP-205ENST00000417413 NPTXRO95502 500 aa20.53■□□□□ 0.88
RAB3IP-205ENST00000417413 NOMO3P69849 1222 aa20.53■□□□□ 0.88
RAB3IP-205ENST00000417413 CAP1Q01518 475 aa20.53■□□□□ 0.88
RAB3IP-205ENST00000417413 NAA35Q5VZE5 725 aa20.53■□□□□ 0.88
RAB3IP-205ENST00000417413 RASGEF1CQ8N431 466 aa20.53■□□□□ 0.88
RAB3IP-205ENST00000417413 ACTRT1Q8TDG2 376 aa20.53■□□□□ 0.88
RAB3IP-205ENST00000417413 HNRNPLLQ8WVV9 542 aaKnown RBP20.53■□□□□ 0.88
RAB3IP-205ENST00000417413 ZNF606Q8WXB4 792 aa20.53■□□□□ 0.88
RAB3IP-205ENST00000417413 CPA5Q8WXQ8 436 aa20.53■□□□□ 0.88
RAB3IP-205ENST00000417413 FAXDC2Q96IV6 333 aa20.53■□□□□ 0.88
RAB3IP-205ENST00000417413 SELENOOQ9BVL4 669 aa20.53■□□□□ 0.88
RAB3IP-205ENST00000417413 BCO2Q9BYV7 579 aa20.53■□□□□ 0.88
RAB3IP-205ENST00000417413 RNF216Q9NWF9 866 aaPredicted RBP20.53■□□□□ 0.88
RAB3IP-205ENST00000417413 THAP12O43422 761 aa20.53■□□□□ 0.88
RAB3IP-205ENST00000417413 SEC31AO94979 1220 aaKnown RBP20.53■□□□□ 0.88
RAB3IP-205ENST00000417413 KRT19P08727 400 aa20.53■□□□□ 0.88
RAB3IP-205ENST00000417413 WEE2P0C1S8 567 aa20.53■□□□□ 0.88
RAB3IP-205ENST00000417413 C6orf222P0C671 652 aaPredicted RBP20.53■□□□□ 0.88
RAB3IP-205ENST00000417413 CD58P19256 250 aa20.53■□□□□ 0.88
RAB3IP-205ENST00000417413 EIF4BP23588 611 aaKnown RBP20.53■□□□□ 0.88
RAB3IP-205ENST00000417413 NKX3-2P78367 333 aa20.53■□□□□ 0.88
RAB3IP-205ENST00000417413 TMEM132DQ14C87 1099 aa20.53■□□□□ 0.88
RAB3IP-205ENST00000417413 SLC27A1Q6PCB7 646 aa20.53■□□□□ 0.88
RAB3IP-205ENST00000417413 MON1BQ7L1V2 547 aa20.53■□□□□ 0.88
RAB3IP-205ENST00000417413 USP38Q8NB14 1042 aa20.53■□□□□ 0.88
RAB3IP-205ENST00000417413 ZNF564Q8TBZ8 553 aaPredicted RBP20.53■□□□□ 0.88
RAB3IP-205ENST00000417413 PXYLP1Q8TE99 480 aa20.53■□□□□ 0.88
RAB3IP-205ENST00000417413 AVENQ9NQS1 362 aaPredicted RBP20.53■□□□□ 0.88
RAB3IP-205ENST00000417413 CNOT8Q9UFF9 292 aaKnown RBP20.53■□□□□ 0.88
RAB3IP-205ENST00000417413 C2CD2Q9Y426 696 aa20.53■□□□□ 0.88
RAB3IP-205ENST00000417413 CEP104O60308 925 aa20.52■□□□□ 0.88
RAB3IP-205ENST00000417413 HMGCRP04035 888 aa20.52■□□□□ 0.88
RAB3IP-205ENST00000417413 ITGB3P05106 788 aa20.52■□□□□ 0.88
RAB3IP-205ENST00000417413 ATICP31939 592 aa20.52■□□□□ 0.88
RAB3IP-205ENST00000417413 SNX17Q15036 470 aa20.52■□□□□ 0.88
RAB3IP-205ENST00000417413 ZNF667Q5HYK9 610 aa20.52■□□□□ 0.88
RAB3IP-205ENST00000417413 SCARA5Q6ZMJ2 495 aa20.52■□□□□ 0.88
RAB3IP-205ENST00000417413 APBB1IPQ7Z5R6 666 aaPredicted RBP20.52■□□□□ 0.88
RAB3IP-205ENST00000417413 NT5DC4Q86YG4 428 aa20.52■□□□□ 0.88
RAB3IP-205ENST00000417413 CD302Q8IX05 232 aa20.52■□□□□ 0.88
RAB3IP-205ENST00000417413 C7orf31Q8N865 590 aa20.52■□□□□ 0.88
RAB3IP-205ENST00000417413 TMEM40Q8WWA1 233 aa20.52■□□□□ 0.88
RAB3IP-205ENST00000417413 RPS6KC1Q96S38 1066 aa20.52■□□□□ 0.88
RAB3IP-205ENST00000417413 ZSWIM1Q9BR11 485 aa20.52■□□□□ 0.88
RAB3IP-205ENST00000417413 CCDC94Q9BW85 323 aaPredicted RBP20.52■□□□□ 0.88
RAB3IP-205ENST00000417413 VRTNQ9H8Y1 702 aa20.52■□□□□ 0.88
RAB3IP-205ENST00000417413 TMEM59LQ9UK28 342 aa20.52■□□□□ 0.88
RAB3IP-205ENST00000417413 SEPT4O43236 478 aa20.51■□□□□ 0.87
RAB3IP-205ENST00000417413 MYBL1P10243 752 aa20.51■□□□□ 0.87
RAB3IP-205ENST00000417413 GNAT1P11488 350 aa20.51■□□□□ 0.87
RAB3IP-205ENST00000417413 TRIM32Q13049 653 aa20.51■□□□□ 0.87
RAB3IP-205ENST00000417413 NOTUMQ6P988 496 aa20.51■□□□□ 0.87
RAB3IP-205ENST00000417413 PHF13Q86YI8 300 aaPredicted RBP20.51■□□□□ 0.87
RAB3IP-205ENST00000417413 NME8Q8N427 588 aa20.51■□□□□ 0.87
RAB3IP-205ENST00000417413 ZNF296Q8WUU4 475 aaPredicted RBP20.51■□□□□ 0.87
RAB3IP-205ENST00000417413 TRIM11Q96F44 468 aa20.51■□□□□ 0.87
RAB3IP-205ENST00000417413 MTG1Q9BT17 334 aaPredicted RBP20.51■□□□□ 0.87
RAB3IP-205ENST00000417413 LRRC1Q9BTT6 524 aa20.51■□□□□ 0.87
RAB3IP-205ENST00000417413 EIF2AQ9BY44 585 aaKnown RBP20.51■□□□□ 0.87
RAB3IP-205ENST00000417413 SDCBP2Q9H190 292 aa20.51■□□□□ 0.87
RAB3IP-205ENST00000417413 PLEKHA5Q9HAU0 1116 aa20.51■□□□□ 0.87
RAB3IP-205ENST00000417413 ARFGAP3Q9NP61 516 aa20.51■□□□□ 0.87
RAB3IP-205ENST00000417413 NXF1Q9UBU9 619 aaKnown RBP20.51■□□□□ 0.87
RAB3IP-205ENST00000417413 THSD7BQ9C0I4 1608 aa20.51■□□□□ 0.87
RAB3IP-205ENST00000417413 RARBP10826 455 aa20.5■□□□□ 0.87
RAB3IP-205ENST00000417413 AXLP30530 894 aa20.5■□□□□ 0.87
RAB3IP-205ENST00000417413 SSTR3P32745 418 aaPredicted RBP20.5■□□□□ 0.87
RAB3IP-205ENST00000417413 NSFP46459 744 aaKnown RBP20.5■□□□□ 0.87
RAB3IP-205ENST00000417413 GUCY2FP51841 1108 aa20.5■□□□□ 0.87
RAB3IP-205ENST00000417413 CRYBB1P53674 252 aaPredicted RBP20.5■□□□□ 0.87
RAB3IP-205ENST00000417413 RNASE9P60153 205 aaKnown RBP20.5■□□□□ 0.87
RAB3IP-205ENST00000417413 YWHAEP62258 255 aaKnown RBP20.5■□□□□ 0.87
RAB3IP-205ENST00000417413 MESDQ14696 234 aa20.5■□□□□ 0.87
RAB3IP-205ENST00000417413 GNASQ5JWF2 1037 aa20.5■□□□□ 0.87
RAB3IP-205ENST00000417413 DCAF12L1Q5VU92 463 aa20.5■□□□□ 0.87
RAB3IP-205ENST00000417413 PASD1Q8IV76 773 aa20.5■□□□□ 0.87
RAB3IP-205ENST00000417413 UBE2Q2Q8WVN8 375 aa20.5■□□□□ 0.87
RAB3IP-205ENST00000417413 CXCL16Q9H2A7 254 aa20.5■□□□□ 0.87
RAB3IP-205ENST00000417413 DPP3Q9NY33 737 aa20.5■□□□□ 0.87
RAB3IP-205ENST00000417413 ITGA11Q9UKX5 1188 aa20.5■□□□□ 0.87
RAB3IP-205ENST00000417413 TTC7AQ9ULT0 858 aaPredicted RBP20.5■□□□□ 0.87
RAB3IP-205ENST00000417413 TMEM110-MUSTN1A8MSY1 372 aa20.49■□□□□ 0.87
RAB3IP-205ENST00000417413 COMTP21964 271 aa20.49■□□□□ 0.87
RAB3IP-205ENST00000417413 C1QTNF8P60827 252 aa20.49■□□□□ 0.87
RAB3IP-205ENST00000417413 CACNB2Q08289 660 aaPredicted RBP20.49■□□□□ 0.87
RAB3IP-205ENST00000417413 PTP4A2Q12974 167 aa20.49■□□□□ 0.87
RAB3IP-205ENST00000417413 WDR72Q3MJ13 1102 aa20.49■□□□□ 0.87
RAB3IP-205ENST00000417413 SLAIN1Q8ND83 568 aa20.49■□□□□ 0.87
RAB3IP-205ENST00000417413 CD101Q93033 1021 aa20.49■□□□□ 0.87
RAB3IP-205ENST00000417413 VCPIP1Q96JH7 1222 aa20.49■□□□□ 0.87
RAB3IP-205ENST00000417413 BTBD6Q96KE9 485 aa20.49■□□□□ 0.87
RAB3IP-205ENST00000417413 SNX27Q96L92 541 aa20.49■□□□□ 0.87
RAB3IP-205ENST00000417413 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.49■□□□□ 0.87
RAB3IP-205ENST00000417413 SNTG2Q9NY99 539 aa20.49■□□□□ 0.87
RAB3IP-205ENST00000417413 FAM53CQ9NYF3 392 aa20.49■□□□□ 0.87
RAB3IP-205ENST00000417413 DERAQ9Y315 318 aa20.49■□□□□ 0.87
RAB3IP-205ENST00000417413 MIF4GDA9UHW6 222 aaKnown RBP20.49■□□□□ 0.87
RAB3IP-205ENST00000417413 PGRMC1O00264 195 aaKnown RBP20.49■□□□□ 0.87
RAB3IP-205ENST00000417413 STAU1O95793 577 aaKnown RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms