RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 ENC1O14682 589 aa18.17■□□□□ 0.5
CALD1-204ENST00000417172 PTGESO14684 152 aa18.17■□□□□ 0.5
CALD1-204ENST00000417172 RPLP2P05387 115 aaKnown RBP18.17■□□□□ 0.5
CALD1-204ENST00000417172 CDR2Q01850 454 aa18.17■□□□□ 0.5
CALD1-204ENST00000417172 HMGXB4Q9UGU5 601 aa18.17■□□□□ 0.5
CALD1-204ENST00000417172 OGDHLQ9ULD0 1010 aa18.17■□□□□ 0.5
CALD1-204ENST00000417172 CNTN6Q9UQ52 1028 aa18.17■□□□□ 0.5
CALD1-204ENST00000417172 SCN5AQ14524 2016 aa18.17■□□□□ 0.5
CALD1-204ENST00000417172 MLH1P40692 756 aa18.17■□□□□ 0.5
CALD1-204ENST00000417172 CDK7P50613 346 aa18.17■□□□□ 0.5
CALD1-204ENST00000417172 ZNF132P52740 706 aa18.17■□□□□ 0.5
CALD1-204ENST00000417172 ATN1P54259 1190 aaPredicted RBP18.17■□□□□ 0.5
CALD1-204ENST00000417172 NT5DC4Q86YG4 428 aa18.17■□□□□ 0.5
CALD1-204ENST00000417172 PKNOX2Q96KN3 472 aa18.17■□□□□ 0.5
CALD1-204ENST00000417172 DERAQ9Y315 318 aa18.17■□□□□ 0.5
CALD1-204ENST00000417172 URI1O94763 535 aaPredicted RBP18.16■□□□□ 0.5
CALD1-204ENST00000417172 TFRCP02786 760 aaKnown RBP18.16■□□□□ 0.5
CALD1-204ENST00000417172 H2AFZP0C0S5 128 aa18.16■□□□□ 0.5
CALD1-204ENST00000417172 GNA15P30679 374 aa18.16■□□□□ 0.5
CALD1-204ENST00000417172 RBP5P82980 135 aa18.16■□□□□ 0.5
CALD1-204ENST00000417172 XKR4Q5GH76 650 aa18.16■□□□□ 0.5
CALD1-204ENST00000417172 H2AFVQ71UI9 128 aa18.16■□□□□ 0.5
CALD1-204ENST00000417172 PASD1Q8IV76 773 aa18.16■□□□□ 0.5
CALD1-204ENST00000417172 FAM126BQ8IXS8 530 aa18.16■□□□□ 0.5
CALD1-204ENST00000417172 RNF169Q8NCN4 708 aa18.16■□□□□ 0.5
CALD1-204ENST00000417172 TET1Q8NFU7 2136 aa18.16■□□□□ 0.5
CALD1-204ENST00000417172 ARHGEF26Q96DR7 871 aa18.16■□□□□ 0.5
CALD1-204ENST00000417172 ADAM2Q99965 735 aa18.16■□□□□ 0.5
CALD1-204ENST00000417172 BCO2Q9BYV7 579 aa18.16■□□□□ 0.5
CALD1-204ENST00000417172 THAP2Q9H0W7 228 aa18.16■□□□□ 0.5
CALD1-204ENST00000417172 LUC7LQ9NQ29 371 aaKnown RBP18.16■□□□□ 0.5
CALD1-204ENST00000417172 CHST12Q9NRB3 414 aa18.16■□□□□ 0.5
CALD1-204ENST00000417172 CHORDC1Q9UHD1 332 aaPredicted RBP18.16■□□□□ 0.5
CALD1-204ENST00000417172 TDRD15B5MCY1 1934 aaKnown RBP18.16■□□□□ 0.5
CALD1-204ENST00000417172 TUBB4AP04350 444 aa18.15■□□□□ 0.5
CALD1-204ENST00000417172 ZSCAN20P17040 1043 aaPredicted RBP18.15■□□□□ 0.5
CALD1-204ENST00000417172 IGFBP6P24592 240 aaPredicted RBP18.15■□□□□ 0.5
CALD1-204ENST00000417172 MNX1P50219 401 aaPredicted RBP18.15■□□□□ 0.5
CALD1-204ENST00000417172 NAP1L1P55209 391 aaKnown RBP18.15■□□□□ 0.5
CALD1-204ENST00000417172 DSC3Q14574 896 aa18.15■□□□□ 0.5
CALD1-204ENST00000417172 C10orf76Q5T2E6 689 aa18.15■□□□□ 0.5
CALD1-204ENST00000417172 BEST2Q8NFU1 509 aa18.15■□□□□ 0.5
CALD1-204ENST00000417172 TAF4BQ92750 862 aa18.15■□□□□ 0.5
CALD1-204ENST00000417172 GAD1Q99259 594 aa18.15■□□□□ 0.5
CALD1-204ENST00000417172 ZSWIM1Q9BR11 485 aa18.15■□□□□ 0.5
CALD1-204ENST00000417172 MYO1AQ9UBC5 1043 aa18.15■□□□□ 0.5
CALD1-204ENST00000417172 PUF60Q9UHX1 559 aaKnown RBP18.15■□□□□ 0.5
CALD1-204ENST00000417172 ATMINO43313 823 aaPredicted RBP18.15■□□□□ 0.5
CALD1-204ENST00000417172 PQBP1O60828 265 aaKnown RBP18.15■□□□□ 0.5
CALD1-204ENST00000417172 FTLP02792 175 aaPredicted RBP18.15■□□□□ 0.5
CALD1-204ENST00000417172 ITGA4P13612 1032 aa18.15■□□□□ 0.5
CALD1-204ENST00000417172 KCNE1P15382 129 aa18.15■□□□□ 0.5
CALD1-204ENST00000417172 ATF7P17544 494 aaPredicted RBP18.15■□□□□ 0.5
CALD1-204ENST00000417172 BRD2P25440 801 aaKnown RBP18.15■□□□□ 0.5
CALD1-204ENST00000417172 ATICP31939 592 aa18.15■□□□□ 0.5
CALD1-204ENST00000417172 C9orf57Q5W0N0 161 aa18.15■□□□□ 0.5
CALD1-204ENST00000417172 AGMOQ6ZNB7 445 aa18.15■□□□□ 0.5
CALD1-204ENST00000417172 GSTCDQ8NEC7 633 aa18.15■□□□□ 0.5
CALD1-204ENST00000417172 TWNKQ96RR1 684 aa18.15■□□□□ 0.5
CALD1-204ENST00000417172 GOLPH3Q9H4A6 298 aa18.15■□□□□ 0.5
CALD1-204ENST00000417172 VRTNQ9H8Y1 702 aa18.15■□□□□ 0.5
CALD1-204ENST00000417172 MIOSQ9NXC5 875 aa18.15■□□□□ 0.5
CALD1-204ENST00000417172 UBQLN1Q9UMX0 589 aaKnown RBP18.15■□□□□ 0.5
CALD1-204ENST00000417172 THAP12O43422 761 aa18.14■□□□□ 0.49
CALD1-204ENST00000417172 ATP1A1P05023 1023 aaKnown RBP18.14■□□□□ 0.49
CALD1-204ENST00000417172 HSPA8P11142 646 aaKnown RBP18.14■□□□□ 0.49
CALD1-204ENST00000417172 DIS3LQ8TF46 1054 aaKnown RBP18.14■□□□□ 0.49
CALD1-204ENST00000417172 MMS19Q96T76 1030 aa18.14■□□□□ 0.49
CALD1-204ENST00000417172 NAPGQ99747 312 aaPredicted RBP18.14■□□□□ 0.49
CALD1-204ENST00000417172 OSGEPQ9NPF4 335 aa18.14■□□□□ 0.49
CALD1-204ENST00000417172 CTAGE9A4FU28 777 aa18.13■□□□□ 0.49
CALD1-204ENST00000417172 CD4P01730 458 aa18.13■□□□□ 0.49
CALD1-204ENST00000417172 PTPROQ16827 1216 aa18.13■□□□□ 0.49
CALD1-204ENST00000417172 C2CD6Q53TS8 623 aa18.13■□□□□ 0.49
CALD1-204ENST00000417172 LRRN4CLQ8ND94 238 aa18.13■□□□□ 0.49
CALD1-204ENST00000417172 WHAMMQ8TF30 809 aa18.13■□□□□ 0.49
CALD1-204ENST00000417172 CPA5Q8WXQ8 436 aa18.13■□□□□ 0.49
CALD1-204ENST00000417172 TFAP2BQ92481 460 aa18.13■□□□□ 0.49
CALD1-204ENST00000417172 RABGGTAQ92696 567 aa18.13■□□□□ 0.49
CALD1-204ENST00000417172 ISCUQ9H1K1 167 aa18.13■□□□□ 0.49
CALD1-204ENST00000417172 ANO9A1A5B4 782 aa18.13■□□□□ 0.49
CALD1-204ENST00000417172 SPTLC1O15269 473 aa18.13■□□□□ 0.49
CALD1-204ENST00000417172 CAND2O75155 1236 aa18.13■□□□□ 0.49
CALD1-204ENST00000417172 TNNC1P63316 161 aa18.13■□□□□ 0.49
CALD1-204ENST00000417172 CLEC16AQ2KHT3 1053 aa18.13■□□□□ 0.49
CALD1-204ENST00000417172 LRRC8DQ7L1W4 858 aa18.13■□□□□ 0.49
CALD1-204ENST00000417172 RTN4RL1Q86UN2 441 aaPredicted RBP18.13■□□□□ 0.49
CALD1-204ENST00000417172 LINC01599Q8WXQ3 324 aa18.13■□□□□ 0.49
CALD1-204ENST00000417172 CYFIP2Q96F07 1278 aa18.13■□□□□ 0.49
CALD1-204ENST00000417172 ZNF333Q96JL9 665 aa18.13■□□□□ 0.49
CALD1-204ENST00000417172 NOX5Q96PH1 765 aa18.13■□□□□ 0.49
CALD1-204ENST00000417172 PPP1R10Q96QC0 940 aaKnown RBP18.13■□□□□ 0.49
CALD1-204ENST00000417172 SNX9Q9Y5X1 595 aa18.13■□□□□ 0.49
CALD1-204ENST00000417172 ARL5CA6NH57 179 aa18.12■□□□□ 0.49
CALD1-204ENST00000417172 TLR3O15455 904 aaKnown RBP18.12■□□□□ 0.49
CALD1-204ENST00000417172 NCK2O43639 380 aa18.12■□□□□ 0.49
CALD1-204ENST00000417172 RTN2O75298 545 aa18.12■□□□□ 0.49
CALD1-204ENST00000417172 TACC1O75410 805 aa18.12■□□□□ 0.49
CALD1-204ENST00000417172 PALMO75781 387 aa18.12■□□□□ 0.49
CALD1-204ENST00000417172 NOP2P46087 812 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms