RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 ZNF667Q5HYK9 610 aa11.4□□□□□ -0.58
SMPD4P1-201ENST00000416717 NT5DC3Q86UY8 548 aa11.4□□□□□ -0.58
SMPD4P1-201ENST00000416717 WNT8BQ93098 351 aa11.4□□□□□ -0.58
SMPD4P1-201ENST00000416717 PNKPQ96T60 521 aa11.4□□□□□ -0.58
SMPD4P1-201ENST00000416717 NUP85Q9BW27 656 aa11.4□□□□□ -0.58
SMPD4P1-201ENST00000416717 ASB7Q9H672 318 aa11.4□□□□□ -0.58
SMPD4P1-201ENST00000416717 SMYD3Q9H7B4 428 aa11.4□□□□□ -0.58
SMPD4P1-201ENST00000416717 TSKSQ9UJT2 592 aa11.4□□□□□ -0.58
SMPD4P1-201ENST00000416717 ATP8B3O60423 1300 aa11.4□□□□□ -0.58
SMPD4P1-201ENST00000416717 ASGR1P07306 291 aa11.4□□□□□ -0.58
SMPD4P1-201ENST00000416717 CLCN6P51797 869 aa11.4□□□□□ -0.58
SMPD4P1-201ENST00000416717 CDC42EP1Q00587 391 aa11.4□□□□□ -0.58
SMPD4P1-201ENST00000416717 KCNA10Q16322 511 aa11.4□□□□□ -0.58
SMPD4P1-201ENST00000416717 DCAF4L1Q3SXM0 396 aa11.4□□□□□ -0.58
SMPD4P1-201ENST00000416717 CPNE8Q86YQ8 564 aa11.4□□□□□ -0.58
SMPD4P1-201ENST00000416717 RHOT2Q8IXI1 618 aa11.4□□□□□ -0.58
SMPD4P1-201ENST00000416717 SYCE1Q8N0S2 351 aa11.4□□□□□ -0.58
SMPD4P1-201ENST00000416717 ZNF606Q8WXB4 792 aa11.4□□□□□ -0.58
SMPD4P1-201ENST00000416717 ZMAT2Q96NC0 199 aaKnown RBP11.4□□□□□ -0.58
SMPD4P1-201ENST00000416717 DPP3Q9NY33 737 aa11.4□□□□□ -0.58
SMPD4P1-201ENST00000416717 CNOT8Q9UFF9 292 aaKnown RBP11.4□□□□□ -0.58
SMPD4P1-201ENST00000416717 AMFRQ9UKV5 643 aa11.4□□□□□ -0.58
SMPD4P1-201ENST00000416717 RALGAPA2Q2PPJ7 1873 aa11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 CEP104O60308 925 aa11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 UNGP13051 313 aaPredicted RBP11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 IBSPP21815 317 aaPredicted RBP11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 NSFP46459 744 aaKnown RBP11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 KYAT1Q16773 422 aa11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 SLFN11Q7Z7L1 901 aa11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 UBR7Q8N806 425 aa11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 ZNF564Q8TBZ8 553 aaPredicted RBP11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 C18orf25Q96B23 403 aaPredicted RBP11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 HPDLQ96IR7 371 aa11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 C11orf70Q9BRQ4 267 aa11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 SDCBP2Q9H190 292 aa11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 PLEKHA4Q9H4M7 779 aa11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 CREBZFQ9NS37 354 aa11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 GTF2IRD1Q9UHL9 959 aa11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 PDCD11Q14690 1871 aaKnown RBP11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 PPEF2O14830 753 aa11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 ADAMTS4O75173 837 aa11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 ZMYND10O75800 440 aa11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 RECQL4O94761 1208 aa11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 SEC31AO94979 1220 aaKnown RBP11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 CD19P15391 556 aa11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 H2AFXP16104 143 aaPredicted RBP11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 RRM1P23921 792 aa11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 CRYBB1P53674 252 aaPredicted RBP11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 YARSP54577 528 aaKnown RBP11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 CFAP221Q4G0U5 840 aa11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 DPH6Q7L8W6 267 aa11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 SPATA4Q8NEY3 305 aa11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 ZSWIM1Q9BR11 485 aa11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 CELF4Q9BZC1 486 aaKnown RBP11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 RNF39Q9H2S5 420 aa11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 TUBGCP4Q9UGJ1 667 aa11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 PARP2Q9UGN5 583 aa11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 HMGXB4Q9UGU5 601 aa11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 CNTN6Q9UQ52 1028 aa11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 STXBP5LQ9Y2K9 1186 aa11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 NOC2LQ9Y3T9 749 aaKnown RBP11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 ALG6Q9Y672 507 aa11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 CDY2AQ9Y6F7 541 aa11.39□□□□□ -0.59
SMPD4P1-201ENST00000416717 KPNA6O60684 536 aa11.38□□□□□ -0.59
SMPD4P1-201ENST00000416717 ZNF132P52740 706 aa11.38□□□□□ -0.59
SMPD4P1-201ENST00000416717 NFX1Q12986 1120 aaKnown RBP11.38□□□□□ -0.59
SMPD4P1-201ENST00000416717 KCTD19Q17RG1 926 aaPredicted RBP11.38□□□□□ -0.59
SMPD4P1-201ENST00000416717 TWF2Q6IBS0 349 aaKnown RBP11.38□□□□□ -0.59
SMPD4P1-201ENST00000416717 SESTD1Q86VW0 696 aa11.38□□□□□ -0.59
SMPD4P1-201ENST00000416717 ZNF677Q86XU0 584 aa11.38□□□□□ -0.59
SMPD4P1-201ENST00000416717 MCOLN2Q8IZK6 566 aa11.38□□□□□ -0.59
SMPD4P1-201ENST00000416717 CXorf38Q8TB03 319 aa11.38□□□□□ -0.59
SMPD4P1-201ENST00000416717 RAET1EQ8TD07 263 aa11.38□□□□□ -0.59
SMPD4P1-201ENST00000416717 TFAP2BQ92481 460 aa11.38□□□□□ -0.59
SMPD4P1-201ENST00000416717 TRIM7Q9C029 511 aa11.38□□□□□ -0.59
SMPD4P1-201ENST00000416717 UPF3AQ9H1J1 476 aaKnown RBP11.38□□□□□ -0.59
SMPD4P1-201ENST00000416717 RBM12Q9NTZ6 932 aaKnown RBP11.38□□□□□ -0.59
SMPD4P1-201ENST00000416717 SRRDQ9UH36 339 aa11.38□□□□□ -0.59
SMPD4P1-201ENST00000416717 GTF3C4Q9UKN8 822 aa11.38□□□□□ -0.59
SMPD4P1-201ENST00000416717 M0QZ92 97 aa11.38□□□□□ -0.59
SMPD4P1-201ENST00000416717 GJB6O95452 261 aa11.38□□□□□ -0.59
SMPD4P1-201ENST00000416717 CYP1A1P04798 512 aaPredicted RBP11.38□□□□□ -0.59
SMPD4P1-201ENST00000416717 CYP1A2P05177 515 aa11.38□□□□□ -0.59
SMPD4P1-201ENST00000416717 HOXC8P31273 242 aa11.38□□□□□ -0.59
SMPD4P1-201ENST00000416717 APLP1P51693 650 aa11.38□□□□□ -0.59
SMPD4P1-201ENST00000416717 NOMO3P69849 1222 aa11.38□□□□□ -0.59
SMPD4P1-201ENST00000416717 MRPS6P82932 125 aaKnown RBP11.38□□□□□ -0.59
SMPD4P1-201ENST00000416717 ZNF211Q13398 564 aaPredicted RBP11.38□□□□□ -0.59
SMPD4P1-201ENST00000416717 MMS22LQ6ZRQ5 1243 aa11.38□□□□□ -0.59
SMPD4P1-201ENST00000416717 APBB1IPQ7Z5R6 666 aaPredicted RBP11.38□□□□□ -0.59
SMPD4P1-201ENST00000416717 FAM228AQ86W67 206 aa11.38□□□□□ -0.59
SMPD4P1-201ENST00000416717 SNX27Q96L92 541 aa11.38□□□□□ -0.59
SMPD4P1-201ENST00000416717 TWNKQ96RR1 684 aa11.38□□□□□ -0.59
SMPD4P1-201ENST00000416717 ABCB6Q9NP58 842 aa11.38□□□□□ -0.59
SMPD4P1-201ENST00000416717 ARGLU1Q9NWB6 273 aaPredicted RBP11.38□□□□□ -0.59
SMPD4P1-201ENST00000416717 COMTP21964 271 aa11.37□□□□□ -0.59
SMPD4P1-201ENST00000416717 MARCKSL1P49006 195 aa11.37□□□□□ -0.59
SMPD4P1-201ENST00000416717 VEGFBP49765 207 aa11.37□□□□□ -0.59
SMPD4P1-201ENST00000416717 RBP5P82980 135 aa11.37□□□□□ -0.59
SMPD4P1-201ENST00000416717 SLC7A5Q01650 507 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms