RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 IFNEQ86WN2 208 aa13.56□□□□□ -0.24
SCN1B-202ENST00000415950 ABI1Q8IZP0 508 aa13.56□□□□□ -0.24
SCN1B-202ENST00000415950 SPATA20Q8TB22 786 aa13.56□□□□□ -0.24
SCN1B-202ENST00000415950 SYN2Q92777 582 aaPredicted RBP13.56□□□□□ -0.24
SCN1B-202ENST00000415950 FAM84AQ96KN4 292 aa13.56□□□□□ -0.24
SCN1B-202ENST00000415950 ZMAT2Q96NC0 199 aaKnown RBP13.56□□□□□ -0.24
SCN1B-202ENST00000415950 MCEEQ96PE7 176 aa13.56□□□□□ -0.24
SCN1B-202ENST00000415950 CCND2P30279 289 aa13.56□□□□□ -0.24
SCN1B-202ENST00000415950 SEMA3FQ13275 785 aa13.56□□□□□ -0.24
SCN1B-202ENST00000415950 CRYMQ14894 314 aa13.56□□□□□ -0.24
SCN1B-202ENST00000415950 FASTKD1Q53R41 847 aaKnown RBP13.56□□□□□ -0.24
SCN1B-202ENST00000415950 FAM102AQ5T9C2 384 aaPredicted RBP13.56□□□□□ -0.24
SCN1B-202ENST00000415950 DAB2IPQ5VWQ8 1189 aa13.56□□□□□ -0.24
SCN1B-202ENST00000415950 SLFN12LQ6IEE8 588 aa13.56□□□□□ -0.24
SCN1B-202ENST00000415950 SPATA31D1Q6ZQQ2 1576 aa13.56□□□□□ -0.24
SCN1B-202ENST00000415950 C16orf86Q6ZW13 317 aa13.56□□□□□ -0.24
SCN1B-202ENST00000415950 SLC25A41Q8N5S1 370 aa13.56□□□□□ -0.24
SCN1B-202ENST00000415950 GRAMD1AQ96CP6 724 aa13.56□□□□□ -0.24
SCN1B-202ENST00000415950 NAF1Q96HR8 494 aaKnown RBP13.56□□□□□ -0.24
SCN1B-202ENST00000415950 RAB6BQ9NRW1 208 aa13.56□□□□□ -0.24
SCN1B-202ENST00000415950 TOPORSQ9NS56 1045 aaPredicted RBP13.56□□□□□ -0.24
SCN1B-202ENST00000415950 KPNA7A9QM74 516 aa13.55□□□□□ -0.24
SCN1B-202ENST00000415950 MSH4O15457 936 aa13.55□□□□□ -0.24
SCN1B-202ENST00000415950 RARGP13631 454 aa13.55□□□□□ -0.24
SCN1B-202ENST00000415950 RRM1P23921 792 aa13.55□□□□□ -0.24
SCN1B-202ENST00000415950 MKRN3Q13064 507 aaKnown RBP13.55□□□□□ -0.24
SCN1B-202ENST00000415950 IL31Q6EBC2 164 aa13.55□□□□□ -0.24
SCN1B-202ENST00000415950 CATSPER4Q7RTX7 472 aa13.55□□□□□ -0.24
SCN1B-202ENST00000415950 SZRD1Q7Z422 152 aa13.55□□□□□ -0.24
SCN1B-202ENST00000415950 CNPY4Q8N129 248 aa13.55□□□□□ -0.24
SCN1B-202ENST00000415950 GIPC2Q8TF65 315 aa13.55□□□□□ -0.24
SCN1B-202ENST00000415950 MTBPQ96DY7 904 aa13.55□□□□□ -0.24
SCN1B-202ENST00000415950 AGAP3Q96P47 875 aa13.55□□□□□ -0.24
SCN1B-202ENST00000415950 FAM111AQ96PZ2 611 aa13.55□□□□□ -0.24
SCN1B-202ENST00000415950 SNX5Q9Y5X3 404 aa13.55□□□□□ -0.24
SCN1B-202ENST00000415950 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.55□□□□□ -0.24
SCN1B-202ENST00000415950 M0QYV0 167 aa13.55□□□□□ -0.24
SCN1B-202ENST00000415950 FSBPO95073 299 aa13.55□□□□□ -0.24
SCN1B-202ENST00000415950 ARHGDIAP52565 204 aa13.55□□□□□ -0.24
SCN1B-202ENST00000415950 ELF3P78545 371 aaPredicted RBP13.55□□□□□ -0.24
SCN1B-202ENST00000415950 PPATQ06203 517 aa13.55□□□□□ -0.24
SCN1B-202ENST00000415950 ALCAMQ13740 583 aa13.55□□□□□ -0.24
SCN1B-202ENST00000415950 TRIP10Q15642 601 aa13.55□□□□□ -0.24
SCN1B-202ENST00000415950 MAPK6Q16659 721 aa13.55□□□□□ -0.24
SCN1B-202ENST00000415950 ACCSLQ4AC99 568 aa13.55□□□□□ -0.24
SCN1B-202ENST00000415950 HEATR6Q6AI08 1181 aaKnown RBP13.55□□□□□ -0.24
SCN1B-202ENST00000415950 ARMCX2Q7L311 632 aa13.55□□□□□ -0.24
SCN1B-202ENST00000415950 TMEM143Q96AN5 459 aa13.55□□□□□ -0.24
SCN1B-202ENST00000415950 NAALADL1Q9UQQ1 740 aa13.55□□□□□ -0.24
SCN1B-202ENST00000415950 TMEM150BA6NC51 233 aa13.55□□□□□ -0.24
SCN1B-202ENST00000415950 TAC1P20366 129 aa13.55□□□□□ -0.24
SCN1B-202ENST00000415950 PCYT1AP49585 367 aa13.55□□□□□ -0.24
SCN1B-202ENST00000415950 ZNF568Q3ZCX4 644 aa13.55□□□□□ -0.24
SCN1B-202ENST00000415950 NLRP9Q7RTR0 991 aa13.55□□□□□ -0.24
SCN1B-202ENST00000415950 NT5DC3Q86UY8 548 aa13.55□□□□□ -0.24
SCN1B-202ENST00000415950 COA1Q9GZY4 146 aa13.55□□□□□ -0.24
SCN1B-202ENST00000415950 SIK2Q9H0K1 926 aa13.55□□□□□ -0.24
SCN1B-202ENST00000415950 ASNSD1Q9NWL6 643 aa13.55□□□□□ -0.24
SCN1B-202ENST00000415950 BFARQ9NZS9 450 aa13.55□□□□□ -0.24
SCN1B-202ENST00000415950 MEGF6O75095 1541 aa13.55□□□□□ -0.24
SCN1B-202ENST00000415950 GJB6O95452 261 aa13.54□□□□□ -0.24
SCN1B-202ENST00000415950 ENO3P13929 434 aaPredicted RBP13.54□□□□□ -0.24
SCN1B-202ENST00000415950 HIC1Q14526 733 aa13.54□□□□□ -0.24
SCN1B-202ENST00000415950 GRIK5Q16478 980 aa13.54□□□□□ -0.24
SCN1B-202ENST00000415950 DSTYKQ6XUX3 929 aa13.54□□□□□ -0.24
SCN1B-202ENST00000415950 LDHDQ86WU2 507 aa13.54□□□□□ -0.24
SCN1B-202ENST00000415950 AGGF1Q8N302 714 aaeCLIP13.54□□□□□ -0.24
SCN1B-202ENST00000415950 ZSWIM2Q8NEG5 633 aa13.54□□□□□ -0.24
SCN1B-202ENST00000415950 BAP1Q92560 729 aa13.54□□□□□ -0.24
SCN1B-202ENST00000415950 FGFBP2Q9BYJ0 223 aa13.54□□□□□ -0.24
SCN1B-202ENST00000415950 C10orf88Q9H8K7 445 aa13.54□□□□□ -0.24
SCN1B-202ENST00000415950 DONSONQ9NYP3 566 aa13.54□□□□□ -0.24
SCN1B-202ENST00000415950 RBAKQ9NYW8 714 aaPredicted RBP13.54□□□□□ -0.24
SCN1B-202ENST00000415950 HACD3Q9P035 362 aa13.54□□□□□ -0.24
SCN1B-202ENST00000415950 CST8O60676 142 aa13.54□□□□□ -0.24
SCN1B-202ENST00000415950 MYCP01106 439 aaPredicted RBP13.54□□□□□ -0.24
SCN1B-202ENST00000415950 CALB1P05937 261 aa13.54□□□□□ -0.24
SCN1B-202ENST00000415950 WEE2P0C1S8 567 aa13.54□□□□□ -0.24
SCN1B-202ENST00000415950 GNAT1P11488 350 aa13.54□□□□□ -0.24
SCN1B-202ENST00000415950 EPHB2P29323 1055 aa13.54□□□□□ -0.24
SCN1B-202ENST00000415950 ACTR2P61160 394 aa13.54□□□□□ -0.24
SCN1B-202ENST00000415950 AP1B1Q10567 949 aa13.54□□□□□ -0.24
SCN1B-202ENST00000415950 CCDC85BQ15834 202 aaPredicted RBP13.54□□□□□ -0.24
SCN1B-202ENST00000415950 LRRC8EQ6NSJ5 796 aa13.54□□□□□ -0.24
SCN1B-202ENST00000415950 GALNT4Q8N4A0 578 aa13.54□□□□□ -0.24
SCN1B-202ENST00000415950 FSD1LQ9BXM9 530 aa13.54□□□□□ -0.24
SCN1B-202ENST00000415950 CCDC22O60826 627 aa13.54□□□□□ -0.24
SCN1B-202ENST00000415950 EIF3EP60228 445 aaKnown RBP13.54□□□□□ -0.24
SCN1B-202ENST00000415950 EFTUD2Q15029 972 aaKnown RBP eCLIP13.54□□□□□ -0.24
SCN1B-202ENST00000415950 CNGA3Q16281 694 aa13.54□□□□□ -0.24
SCN1B-202ENST00000415950 COL23A1Q86Y22 540 aaPredicted RBP13.54□□□□□ -0.24
SCN1B-202ENST00000415950 SNRNP27Q8WVK2 155 aaKnown RBP13.54□□□□□ -0.24
SCN1B-202ENST00000415950 THAP11Q96EK4 314 aa13.54□□□□□ -0.24
SCN1B-202ENST00000415950 PCMTD2Q9NV79 361 aa13.54□□□□□ -0.24
SCN1B-202ENST00000415950 SEL1LQ9UBV2 794 aa13.54□□□□□ -0.24
SCN1B-202ENST00000415950 RARAP10276 462 aa13.54□□□□□ -0.24
SCN1B-202ENST00000415950 YWHABP31946 246 aaKnown RBP13.54□□□□□ -0.24
SCN1B-202ENST00000415950 SOX10P56693 466 aa13.54□□□□□ -0.24
SCN1B-202ENST00000415950 ORC1Q13415 861 aa13.54□□□□□ -0.24
SCN1B-202ENST00000415950 MED21Q13503 144 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms