RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 DMAC2Q9NW81 257 aa27.33■■□□□ 1.97
CPNE1-207ENST00000414664 ITGA11Q9UKX5 1188 aa27.33■■□□□ 1.97
CPNE1-207ENST00000414664 CDY1Q9Y6F8 540 aa27.33■■□□□ 1.97
CPNE1-207ENST00000414664 NR3C1P04150 777 aa27.32■■□□□ 1.96
CPNE1-207ENST00000414664 CYP24A1Q07973 514 aa27.32■■□□□ 1.96
CPNE1-207ENST00000414664 SV2CQ496J9 727 aa27.32■■□□□ 1.96
CPNE1-207ENST00000414664 RARS2Q5T160 578 aaKnown RBP27.32■■□□□ 1.96
CPNE1-207ENST00000414664 ZNF280DQ6N043 979 aa27.32■■□□□ 1.96
CPNE1-207ENST00000414664 CLEC17AQ6ZS10 378 aa27.32■■□□□ 1.96
CPNE1-207ENST00000414664 USP37Q86T82 979 aa27.32■■□□□ 1.96
CPNE1-207ENST00000414664 WDR49Q8IV35 697 aa27.32■■□□□ 1.96
CPNE1-207ENST00000414664 SUSD6Q92537 303 aa27.32■■□□□ 1.96
CPNE1-207ENST00000414664 ODC1P11926 461 aa27.31■■□□□ 1.96
CPNE1-207ENST00000414664 TYMPP19971 482 aa27.31■■□□□ 1.96
CPNE1-207ENST00000414664 RBP5P82980 135 aa27.31■■□□□ 1.96
CPNE1-207ENST00000414664 YWHAHQ04917 246 aaPredicted RBP27.31■■□□□ 1.96
CPNE1-207ENST00000414664 CTXN3Q4LDR2 81 aa27.31■■□□□ 1.96
CPNE1-207ENST00000414664 CSGALNACT2Q8N6G5 542 aa27.31■■□□□ 1.96
CPNE1-207ENST00000414664 C12orf76Q8N812 135 aaPredicted RBP27.31■■□□□ 1.96
CPNE1-207ENST00000414664 C1orf127Q8N9H9 656 aa27.31■■□□□ 1.96
CPNE1-207ENST00000414664 KREMEN2Q8NCW0 462 aa27.31■■□□□ 1.96
CPNE1-207ENST00000414664 SENP8Q96LD8 212 aa27.31■■□□□ 1.96
CPNE1-207ENST00000414664 MFSD14AQ96MC6 490 aa27.31■■□□□ 1.96
CPNE1-207ENST00000414664 RIPOR3Q96MK2 946 aa27.31■■□□□ 1.96
CPNE1-207ENST00000414664 NECTIN4Q96NY8 510 aa27.31■■□□□ 1.96
CPNE1-207ENST00000414664 TSHZ2Q9NRE2 1034 aa27.31■■□□□ 1.96
CPNE1-207ENST00000414664 DSEQ9UL01 958 aa27.31■■□□□ 1.96
CPNE1-207ENST00000414664 AGAP1Q9UPQ3 857 aa27.31■■□□□ 1.96
CPNE1-207ENST00000414664 DLL1O00548 723 aa27.3■■□□□ 1.96
CPNE1-207ENST00000414664 ITGB3P05106 788 aa27.3■■□□□ 1.96
CPNE1-207ENST00000414664 SPATA31D3P0C874 917 aa27.3■■□□□ 1.96
CPNE1-207ENST00000414664 DLATP10515 647 aaKnown RBP27.3■■□□□ 1.96
CPNE1-207ENST00000414664 TNNI1P19237 187 aa27.3■■□□□ 1.96
CPNE1-207ENST00000414664 RPL13P26373 211 aaKnown RBP27.3■■□□□ 1.96
CPNE1-207ENST00000414664 MTHFRP42898 656 aa27.3■■□□□ 1.96
CPNE1-207ENST00000414664 CBX2Q14781 532 aaPredicted RBP27.3■■□□□ 1.96
CPNE1-207ENST00000414664 NFIL3Q16649 462 aa27.3■■□□□ 1.96
CPNE1-207ENST00000414664 ATAT1Q5SQI0 421 aa27.3■■□□□ 1.96
CPNE1-207ENST00000414664 SLC8B1Q6J4K2 584 aa27.3■■□□□ 1.96
CPNE1-207ENST00000414664 SPATA31D4Q6ZUB0 917 aa27.3■■□□□ 1.96
CPNE1-207ENST00000414664 LRRC52Q8N7C0 313 aa27.3■■□□□ 1.96
CPNE1-207ENST00000414664 CMASQ8NFW8 434 aaPredicted RBP27.3■■□□□ 1.96
CPNE1-207ENST00000414664 ERCC4Q92889 916 aaPredicted RBP27.3■■□□□ 1.96
CPNE1-207ENST00000414664 CCDC127Q96BQ5 260 aa27.3■■□□□ 1.96
CPNE1-207ENST00000414664 POP1Q99575 1024 aaKnown RBP27.3■■□□□ 1.96
CPNE1-207ENST00000414664 MTMR12Q9C0I1 747 aa27.3■■□□□ 1.96
CPNE1-207ENST00000414664 FBXL5Q9UKA1 691 aa27.3■■□□□ 1.96
CPNE1-207ENST00000414664 FRMD4BQ9Y2L6 1034 aa27.3■■□□□ 1.96
CPNE1-207ENST00000414664 PLXNA3P51805 1871 aa27.3■■□□□ 1.96
CPNE1-207ENST00000414664 SPTLC1O15269 473 aa27.29■■□□□ 1.96
CPNE1-207ENST00000414664 ADAM12O43184 909 aa27.29■■□□□ 1.96
CPNE1-207ENST00000414664 TBC1D4O60343 1298 aa27.29■■□□□ 1.96
CPNE1-207ENST00000414664 OAZ2O95190 189 aa27.29■■□□□ 1.96
CPNE1-207ENST00000414664 KRT19P08727 400 aa27.29■■□□□ 1.96
CPNE1-207ENST00000414664 POLR2BP30876 1174 aaKnown RBP27.29■■□□□ 1.96
CPNE1-207ENST00000414664 COBLL1Q53SF7 1204 aa27.29■■□□□ 1.96
CPNE1-207ENST00000414664 LIN9Q5TKA1 542 aa27.29■■□□□ 1.96
CPNE1-207ENST00000414664 RSPO2Q6UXX9 243 aaPredicted RBP27.29■■□□□ 1.96
CPNE1-207ENST00000414664 TMC5Q6UXY8 1006 aa27.29■■□□□ 1.96
CPNE1-207ENST00000414664 CYP26C1Q6V0L0 522 aa27.29■■□□□ 1.96
CPNE1-207ENST00000414664 C15orf39Q6ZRI6 1047 aa27.29■■□□□ 1.96
CPNE1-207ENST00000414664 ADHFE1Q8IWW8 467 aa27.29■■□□□ 1.96
CPNE1-207ENST00000414664 CGRRF1Q99675 332 aa27.29■■□□□ 1.96
CPNE1-207ENST00000414664 FBXW11Q9UKB1 542 aa27.29■■□□□ 1.96
CPNE1-207ENST00000414664 MTCL1Q9Y4B5 1905 aaKnown RBP27.28■■□□□ 1.96
CPNE1-207ENST00000414664 KPNA7A9QM74 516 aa27.28■■□□□ 1.96
CPNE1-207ENST00000414664 LMBRD2Q68DH5 695 aaPredicted RBP27.28■■□□□ 1.96
CPNE1-207ENST00000414664 GPR149Q86SP6 731 aa27.28■■□□□ 1.96
CPNE1-207ENST00000414664 METTL23Q86XA0 190 aa27.28■■□□□ 1.96
CPNE1-207ENST00000414664 SMYD4Q8IYR2 804 aaPredicted RBP27.28■■□□□ 1.96
CPNE1-207ENST00000414664 GBP4Q96PP9 640 aa27.28■■□□□ 1.96
CPNE1-207ENST00000414664 PHF7Q9BWX1 381 aaPredicted RBP27.28■■□□□ 1.96
CPNE1-207ENST00000414664 ZDHHC7Q9NXF8 308 aa27.28■■□□□ 1.96
CPNE1-207ENST00000414664 TIMM13Q9Y5L4 95 aaPredicted RBP27.28■■□□□ 1.96
CPNE1-207ENST00000414664 A0A0C4DFX4 3053 aa27.27■■□□□ 1.96
CPNE1-207ENST00000414664 CCDC195A0A1B0GUA6 201 aa27.27■■□□□ 1.96
CPNE1-207ENST00000414664 CYB561D2O14569 222 aa27.27■■□□□ 1.96
CPNE1-207ENST00000414664 PRCPP42785 496 aa27.27■■□□□ 1.96
CPNE1-207ENST00000414664 STIM1Q13586 685 aa27.27■■□□□ 1.96
CPNE1-207ENST00000414664 CEP135Q66GS9 1140 aa27.27■■□□□ 1.96
CPNE1-207ENST00000414664 OVOS1Q6IE37 1185 aa27.27■■□□□ 1.96
CPNE1-207ENST00000414664 RTL10Q7L3V2 364 aa27.27■■□□□ 1.96
CPNE1-207ENST00000414664 OR5B17Q8NGF7 314 aa27.27■■□□□ 1.96
CPNE1-207ENST00000414664 ZNF461Q8TAF7 563 aa27.27■■□□□ 1.96
CPNE1-207ENST00000414664 NECAB3Q96P71 396 aaPredicted RBP27.27■■□□□ 1.96
CPNE1-207ENST00000414664 SCN1AP35498 2009 aa27.26■■□□□ 1.95
CPNE1-207ENST00000414664 OR6C75A6NL08 312 aa27.26■■□□□ 1.95
CPNE1-207ENST00000414664 ZMYND10O75800 440 aa27.26■■□□□ 1.95
CPNE1-207ENST00000414664 CYP11A1P05108 521 aa27.26■■□□□ 1.95
CPNE1-207ENST00000414664 NR2F2P24468 414 aa27.26■■□□□ 1.95
CPNE1-207ENST00000414664 PPP1R2P41236 205 aa27.26■■□□□ 1.95
CPNE1-207ENST00000414664 AP3M2P53677 418 aa27.26■■□□□ 1.95
CPNE1-207ENST00000414664 ARPP19P56211 112 aa27.26■■□□□ 1.95
CPNE1-207ENST00000414664 ROR1Q01973 937 aa27.26■■□□□ 1.95
CPNE1-207ENST00000414664 ZP2Q05996 745 aa27.26■■□□□ 1.95
CPNE1-207ENST00000414664 MYO1EQ12965 1108 aa27.26■■□□□ 1.95
CPNE1-207ENST00000414664 UVSSAQ2YD98 709 aa27.26■■□□□ 1.95
CPNE1-207ENST00000414664 EDRF1Q3B7T1 1238 aa27.26■■□□□ 1.95
CPNE1-207ENST00000414664 TPGS2Q68CL5 300 aa27.26■■□□□ 1.95
CPNE1-207ENST00000414664 CCDC149Q6ZUS6 474 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms