RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 GLYCTKQ8IVS8 523 aa18.34■□□□□ 0.53
SCAMP4-204ENST00000414057 HPS3Q969F9 1004 aa18.34■□□□□ 0.53
SCAMP4-204ENST00000414057 CACNG4Q9UBN1 327 aa18.34■□□□□ 0.53
SCAMP4-204ENST00000414057 SMIM28A0A1B0GU29 152 aa18.33■□□□□ 0.53
SCAMP4-204ENST00000414057 TOM1L1O75674 476 aa18.33■□□□□ 0.53
SCAMP4-204ENST00000414057 PAPLNO95428 1278 aa18.33■□□□□ 0.53
SCAMP4-204ENST00000414057 SPATA31D3P0C874 917 aa18.33■□□□□ 0.53
SCAMP4-204ENST00000414057 PROZP22891 400 aa18.33■□□□□ 0.53
SCAMP4-204ENST00000414057 EEF1GP26641 437 aaKnown RBP18.33■□□□□ 0.53
SCAMP4-204ENST00000414057 ABCD1P33897 745 aa18.33■□□□□ 0.53
SCAMP4-204ENST00000414057 OSTNP61366 133 aa18.33■□□□□ 0.53
SCAMP4-204ENST00000414057 XKR4Q5GH76 650 aa18.33■□□□□ 0.53
SCAMP4-204ENST00000414057 PRSS55Q6UWB4 352 aaPredicted RBP18.33■□□□□ 0.53
SCAMP4-204ENST00000414057 ZPBP2Q6X784 338 aa18.33■□□□□ 0.53
SCAMP4-204ENST00000414057 SPATA31D4Q6ZUB0 917 aa18.33■□□□□ 0.53
SCAMP4-204ENST00000414057 CSGALNACT2Q8N6G5 542 aa18.33■□□□□ 0.53
SCAMP4-204ENST00000414057 LNX1Q8TBB1 728 aaPredicted RBP18.33■□□□□ 0.53
SCAMP4-204ENST00000414057 ZNF507Q8TCN5 953 aa18.33■□□□□ 0.53
SCAMP4-204ENST00000414057 SCFD1Q8WVM8 642 aa18.33■□□□□ 0.53
SCAMP4-204ENST00000414057 PRKD2Q9BZL6 878 aa18.33■□□□□ 0.53
SCAMP4-204ENST00000414057 SAMSN1Q9NSI8 373 aaKnown RBP18.33■□□□□ 0.53
SCAMP4-204ENST00000414057 IGSF9Q9P2J2 1179 aa18.33■□□□□ 0.53
SCAMP4-204ENST00000414057 PCDHB13Q9Y5F0 798 aa18.33■□□□□ 0.53
SCAMP4-204ENST00000414057 GOLGA6L6A8MZA4 724 aa18.33■□□□□ 0.52
SCAMP4-204ENST00000414057 RFPL2O75678 378 aa18.33■□□□□ 0.52
SCAMP4-204ENST00000414057 ZMYND10O75800 440 aa18.33■□□□□ 0.52
SCAMP4-204ENST00000414057 ASGR2P07307 311 aa18.33■□□□□ 0.52
SCAMP4-204ENST00000414057 ATP1A3P13637 1013 aa18.33■□□□□ 0.52
SCAMP4-204ENST00000414057 GBP2P32456 591 aaPredicted RBP18.33■□□□□ 0.52
SCAMP4-204ENST00000414057 CLCNKBP51801 687 aa18.33■□□□□ 0.52
SCAMP4-204ENST00000414057 UPP1Q16831 310 aa18.33■□□□□ 0.52
SCAMP4-204ENST00000414057 EDRF1Q3B7T1 1238 aa18.33■□□□□ 0.52
SCAMP4-204ENST00000414057 ANKRD40Q6AI12 368 aa18.33■□□□□ 0.52
SCAMP4-204ENST00000414057 ALKAL1Q6UXT8 129 aa18.33■□□□□ 0.52
SCAMP4-204ENST00000414057 TAS1R3Q7RTX0 852 aa18.33■□□□□ 0.52
SCAMP4-204ENST00000414057 TMEM161BQ8NDZ6 487 aa18.33■□□□□ 0.52
SCAMP4-204ENST00000414057 ST6GALNAC4Q9H4F1 302 aa18.33■□□□□ 0.52
SCAMP4-204ENST00000414057 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.33■□□□□ 0.523e-7■■■□□ 15.7
SCAMP4-204ENST00000414057 TBC1D7Q9P0N9 293 aa18.33■□□□□ 0.52
SCAMP4-204ENST00000414057 CLUHO75153 1309 aa18.32■□□□□ 0.52
SCAMP4-204ENST00000414057 TRIM49BA6NDI0 452 aa18.32■□□□□ 0.52
SCAMP4-204ENST00000414057 CLDN3O15551 220 aa18.32■□□□□ 0.52
SCAMP4-204ENST00000414057 GCNT3O95395 438 aa18.32■□□□□ 0.52
SCAMP4-204ENST00000414057 HNRNPA1P09651 372 aaKnown RBP eCLIP18.32■□□□□ 0.52
SCAMP4-204ENST00000414057 MYBP10242 640 aa18.32■□□□□ 0.52
SCAMP4-204ENST00000414057 KCNE1P15382 129 aa18.32■□□□□ 0.52
SCAMP4-204ENST00000414057 RPL17P18621 184 aaKnown RBP18.32■□□□□ 0.52
SCAMP4-204ENST00000414057 NUBP1P53384 320 aa18.32■□□□□ 0.52
SCAMP4-204ENST00000414057 PMS1P54277 932 aaKnown RBP18.32■□□□□ 0.52
SCAMP4-204ENST00000414057 UBASH3AP57075 661 aa18.32■□□□□ 0.52
SCAMP4-204ENST00000414057 TDGQ13569 410 aa18.32■□□□□ 0.52
SCAMP4-204ENST00000414057 NOLC1Q14978 699 aaKnown RBP eCLIP18.32■□□□□ 0.52
SCAMP4-204ENST00000414057 ZCWPW2Q504Y3 356 aa18.32■□□□□ 0.52
SCAMP4-204ENST00000414057 RTL10Q7L3V2 364 aa18.32■□□□□ 0.52
SCAMP4-204ENST00000414057 ZNF720Q7Z2F6 126 aa18.32■□□□□ 0.52
SCAMP4-204ENST00000414057 CEP120Q8N960 986 aa18.32■□□□□ 0.52
SCAMP4-204ENST00000414057 NXPE3Q969Y0 559 aa18.32■□□□□ 0.52
SCAMP4-204ENST00000414057 SNX27Q96L92 541 aa18.32■□□□□ 0.52
SCAMP4-204ENST00000414057 DUSP9Q99956 384 aaKnown RBP18.32■□□□□ 0.52
SCAMP4-204ENST00000414057 CLSTN3Q9BQT9 956 aa18.32■□□□□ 0.52
SCAMP4-204ENST00000414057 CXCL16Q9H2A7 254 aa18.32■□□□□ 0.52
SCAMP4-204ENST00000414057 IFNKQ9P0W0 207 aa18.32■□□□□ 0.52
SCAMP4-204ENST00000414057 ANKFY1Q9P2R3 1169 aa18.32■□□□□ 0.52
SCAMP4-204ENST00000414057 MAGEC2Q9UBF1 373 aaPredicted RBP18.32■□□□□ 0.52
SCAMP4-204ENST00000414057 LIMA1Q9UHB6 759 aaKnown RBP18.32■□□□□ 0.52
SCAMP4-204ENST00000414057 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.32■□□□□ 0.52
SCAMP4-204ENST00000414057 LRRC10BA6NIK2 292 aa18.31■□□□□ 0.52
SCAMP4-204ENST00000414057 PDXKO00764 312 aa18.31■□□□□ 0.52
SCAMP4-204ENST00000414057 FGFR3P22607 806 aa18.31■□□□□ 0.52
SCAMP4-204ENST00000414057 HOXA9P31269 272 aa18.31■□□□□ 0.52
SCAMP4-204ENST00000414057 HOXD11P31277 338 aaPredicted RBP18.31■□□□□ 0.52
SCAMP4-204ENST00000414057 RPL9P32969 192 aaKnown RBP18.31■□□□□ 0.52
SCAMP4-204ENST00000414057 MATR3P43243 847 aaKnown RBP eCLIP18.31■□□□□ 0.52
SCAMP4-204ENST00000414057 PTPN5P54829 565 aa18.31■□□□□ 0.52
SCAMP4-204ENST00000414057 KYAT1Q16773 422 aa18.31■□□□□ 0.52
SCAMP4-204ENST00000414057 KNOP1Q1ED39 458 aaKnown RBP18.31■□□□□ 0.52
SCAMP4-204ENST00000414057 FILIP1LQ4L180 1135 aa18.31■□□□□ 0.52
SCAMP4-204ENST00000414057 HS1BP3Q53T59 392 aa18.31■□□□□ 0.52
SCAMP4-204ENST00000414057 PPM1LQ5SGD2 360 aa18.31■□□□□ 0.52
SCAMP4-204ENST00000414057 ANKS3Q6ZW76 656 aa18.31■□□□□ 0.52
SCAMP4-204ENST00000414057 ZNF707Q96C28 371 aaPredicted RBP18.31■□□□□ 0.52
SCAMP4-204ENST00000414057 HVCN1Q96D96 273 aa18.31■□□□□ 0.52
SCAMP4-204ENST00000414057 BICD1Q96G01 975 aa18.31■□□□□ 0.52
SCAMP4-204ENST00000414057 FIZ1Q96SL8 496 aa18.31■□□□□ 0.52
SCAMP4-204ENST00000414057 SRRTQ9BXP5 876 aaKnown RBP18.31■□□□□ 0.52
SCAMP4-204ENST00000414057 XPO4Q9C0E2 1151 aaKnown RBP18.31■□□□□ 0.52
SCAMP4-204ENST00000414057 IRF2BPLQ9H1B7 796 aa18.31■□□□□ 0.52
SCAMP4-204ENST00000414057 KCTD10Q9H3F6 313 aa18.31■□□□□ 0.52
SCAMP4-204ENST00000414057 CNTN3Q9P232 1028 aa18.31■□□□□ 0.52
SCAMP4-204ENST00000414057 FBXW11Q9UKB1 542 aa18.31■□□□□ 0.52
SCAMP4-204ENST00000414057 TRAF3IP3Q9Y228 551 aa18.31■□□□□ 0.52
SCAMP4-204ENST00000414057 TECTAO75443 2155 aa18.31■□□□□ 0.52
SCAMP4-204ENST00000414057 HARSP12081 509 aaKnown RBP18.3■□□□□ 0.52
SCAMP4-204ENST00000414057 AVPR2P30518 371 aa18.3■□□□□ 0.52
SCAMP4-204ENST00000414057 NCKAP1LP55160 1127 aa18.3■□□□□ 0.52
SCAMP4-204ENST00000414057 FKBP3Q00688 224 aaKnown RBP18.3■□□□□ 0.52
SCAMP4-204ENST00000414057 RAB33AQ14088 237 aa18.3■□□□□ 0.52
SCAMP4-204ENST00000414057 TCP11X2Q5H9J9 407 aa18.3■□□□□ 0.52
SCAMP4-204ENST00000414057 GLIS3Q8NEA6 775 aa18.3■□□□□ 0.52
SCAMP4-204ENST00000414057 KCNN1Q92952 543 aa18.3■□□□□ 0.52
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