RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 CFAP69A5D8W1 941 aa15.45■□□□□ 0.06
SEMA3F-202ENST00000413852 POLRMTO00411 1230 aaKnown RBP15.45■□□□□ 0.06
SEMA3F-202ENST00000413852 KRT4P19013 534 aa15.45■□□□□ 0.06
SEMA3F-202ENST00000413852 ATP4AP20648 1035 aa15.45■□□□□ 0.06
SEMA3F-202ENST00000413852 CALB2P22676 271 aa15.45■□□□□ 0.06
SEMA3F-202ENST00000413852 YWHABP31946 246 aaKnown RBP15.45■□□□□ 0.06
SEMA3F-202ENST00000413852 KLF1Q13351 362 aaPredicted RBP15.45■□□□□ 0.06
SEMA3F-202ENST00000413852 LDHDQ86WU2 507 aa15.45■□□□□ 0.06
SEMA3F-202ENST00000413852 GMCL1P1Q8NEA9 526 aa15.45■□□□□ 0.06
SEMA3F-202ENST00000413852 ARMC2Q8NEN0 867 aa15.45■□□□□ 0.06
SEMA3F-202ENST00000413852 LRRC8CQ8TDW0 803 aa15.45■□□□□ 0.06
SEMA3F-202ENST00000413852 PTPRN2Q92932 1015 aa15.45■□□□□ 0.06
SEMA3F-202ENST00000413852 ZFATQ9P243 1243 aa15.45■□□□□ 0.06
SEMA3F-202ENST00000413852 KANSL3Q9P2N6 904 aa15.45■□□□□ 0.06
SEMA3F-202ENST00000413852 AP1G2O75843 785 aa15.44■□□□□ 0.06
SEMA3F-202ENST00000413852 UNGP13051 313 aaPredicted RBP15.44■□□□□ 0.06
SEMA3F-202ENST00000413852 ZNF394Q53GI3 561 aa15.44■□□□□ 0.06
SEMA3F-202ENST00000413852 TTC7BQ86TV6 843 aa15.44■□□□□ 0.06
SEMA3F-202ENST00000413852 LRRC6Q86X45 466 aa15.44■□□□□ 0.06
SEMA3F-202ENST00000413852 ANKRD35Q8N283 1001 aa15.44■□□□□ 0.06
SEMA3F-202ENST00000413852 FBXL13Q8NEE6 735 aa15.44■□□□□ 0.06
SEMA3F-202ENST00000413852 DENND1AQ8TEH3 1009 aa15.44■□□□□ 0.06
SEMA3F-202ENST00000413852 C10orf82Q8WW14 230 aa15.44■□□□□ 0.06
SEMA3F-202ENST00000413852 ZDHHC15Q96MV8 337 aa15.44■□□□□ 0.06
SEMA3F-202ENST00000413852 PIK3CDO00329 1044 aa15.44■□□□□ 0.06
SEMA3F-202ENST00000413852 PPP1R12AO14974 1030 aaPredicted RBP15.44■□□□□ 0.06
SEMA3F-202ENST00000413852 KRT36O76013 467 aa15.44■□□□□ 0.06
SEMA3F-202ENST00000413852 ACOT2P49753 483 aa15.44■□□□□ 0.06
SEMA3F-202ENST00000413852 INHBEP58166 350 aa15.44■□□□□ 0.06
SEMA3F-202ENST00000413852 MSS51Q4VC12 460 aa15.44■□□□□ 0.06
SEMA3F-202ENST00000413852 RNF220Q5VTB9 566 aa15.44■□□□□ 0.06
SEMA3F-202ENST00000413852 HHATQ5VTY9 493 aa15.44■□□□□ 0.06
SEMA3F-202ENST00000413852 MFSD7Q6UXD7 560 aa15.44■□□□□ 0.06
SEMA3F-202ENST00000413852 STK32AQ8WU08 396 aa15.44■□□□□ 0.06
SEMA3F-202ENST00000413852 TMEM206Q9H813 350 aa15.44■□□□□ 0.06
SEMA3F-202ENST00000413852 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.44■□□□□ 0.06
SEMA3F-202ENST00000413852 TXLNGQ9NUQ3 528 aa15.44■□□□□ 0.06
SEMA3F-202ENST00000413852 ARL8BQ9NVJ2 186 aa15.44■□□□□ 0.06
SEMA3F-202ENST00000413852 CYP39A1Q9NYL5 469 aa15.44■□□□□ 0.06
SEMA3F-202ENST00000413852 LGALS13Q9UHV8 139 aa15.44■□□□□ 0.06
SEMA3F-202ENST00000413852 DHX15O43143 795 aaKnown RBP15.43■□□□□ 0.06
SEMA3F-202ENST00000413852 KLRC2P26717 231 aa15.43■□□□□ 0.06
SEMA3F-202ENST00000413852 PDIA2Q13087 525 aaKnown RBP15.43■□□□□ 0.06
SEMA3F-202ENST00000413852 ANKRD22Q5VYY1 191 aa15.43■□□□□ 0.06
SEMA3F-202ENST00000413852 NLRP9Q7RTR0 991 aa15.43■□□□□ 0.06
SEMA3F-202ENST00000413852 CCDC125Q86Z20 511 aa15.43■□□□□ 0.06
SEMA3F-202ENST00000413852 TMEM130Q8N3G9 435 aa15.43■□□□□ 0.06
SEMA3F-202ENST00000413852 MXRA8Q9BRK3 442 aa15.43■□□□□ 0.06
SEMA3F-202ENST00000413852 LRMDAQ9H2I8 198 aa15.43■□□□□ 0.06
SEMA3F-202ENST00000413852 SIPA1L1O43166 1804 aa15.43■□□□□ 0.06
SEMA3F-202ENST00000413852 PTPRJQ12913 1337 aa15.43■□□□□ 0.06
SEMA3F-202ENST00000413852 MAPK13O15264 365 aa15.43■□□□□ 0.06
SEMA3F-202ENST00000413852 EDF1O60869 148 aaKnown RBP15.43■□□□□ 0.06
SEMA3F-202ENST00000413852 RFC5P40937 340 aa15.43■□□□□ 0.06
SEMA3F-202ENST00000413852 NPTX2P47972 431 aa15.43■□□□□ 0.06
SEMA3F-202ENST00000413852 TFDP1Q14186 410 aa15.43■□□□□ 0.06
SEMA3F-202ENST00000413852 ZBTB41Q5SVQ8 909 aa15.43■□□□□ 0.06
SEMA3F-202ENST00000413852 NRG4Q8WWG1 115 aa15.43■□□□□ 0.06
SEMA3F-202ENST00000413852 ZNF75CPQ92670 426 aaPredicted RBP15.43■□□□□ 0.06
SEMA3F-202ENST00000413852 ARMCX1Q9P291 453 aa15.43■□□□□ 0.06
SEMA3F-202ENST00000413852 ZFP69BQ9UJL9 534 aa15.43■□□□□ 0.06
SEMA3F-202ENST00000413852 TBX20Q9UMR3 447 aa15.43■□□□□ 0.06
SEMA3F-202ENST00000413852 USH1CQ9Y6N9 552 aa15.43■□□□□ 0.06
SEMA3F-202ENST00000413852 ATRNL1Q5VV63 1379 aa15.43■□□□□ 0.06
SEMA3F-202ENST00000413852 F8VP50 259 aa15.43■□□□□ 0.06
SEMA3F-202ENST00000413852 RFX1P22670 979 aa15.43■□□□□ 0.06
SEMA3F-202ENST00000413852 NSFP46459 744 aaKnown RBP15.43■□□□□ 0.06
SEMA3F-202ENST00000413852 SATB1Q01826 763 aa15.43■□□□□ 0.06
SEMA3F-202ENST00000413852 BIRC2Q13490 618 aa15.43■□□□□ 0.06
SEMA3F-202ENST00000413852 TCEAL1Q15170 157 aa15.43■□□□□ 0.06
SEMA3F-202ENST00000413852 B3GNT9Q6UX72 402 aa15.43■□□□□ 0.06
SEMA3F-202ENST00000413852 PPP1R21Q6ZMI0 780 aa15.43■□□□□ 0.06
SEMA3F-202ENST00000413852 LRRN4Q8WUT4 740 aa15.43■□□□□ 0.06
SEMA3F-202ENST00000413852 RAB3IPQ96QF0 476 aaPredicted RBP15.43■□□□□ 0.06
SEMA3F-202ENST00000413852 SMC6Q96SB8 1091 aa15.43■□□□□ 0.06
SEMA3F-202ENST00000413852 BATF3Q9NR55 127 aa15.43■□□□□ 0.06
SEMA3F-202ENST00000413852 BTAF1O14981 1849 aa15.42■□□□□ 0.06
SEMA3F-202ENST00000413852 UBE4BO95155 1302 aa15.42■□□□□ 0.06
SEMA3F-202ENST00000413852 HARSP12081 509 aaKnown RBP15.42■□□□□ 0.06
SEMA3F-202ENST00000413852 HOXA10P31260 410 aaPredicted RBP15.42■□□□□ 0.06
SEMA3F-202ENST00000413852 SPARCL1Q14515 664 aa15.42■□□□□ 0.06
SEMA3F-202ENST00000413852 SMTNL2Q2TAL5 461 aa15.42■□□□□ 0.06
SEMA3F-202ENST00000413852 TMEM154Q6P9G4 183 aa15.42■□□□□ 0.06
SEMA3F-202ENST00000413852 TMEM270Q6UE05 265 aa15.42■□□□□ 0.06
SEMA3F-202ENST00000413852 SLCO2A1Q92959 643 aa15.42■□□□□ 0.06
SEMA3F-202ENST00000413852 DDX50Q9BQ39 737 aaKnown RBP15.42■□□□□ 0.06
SEMA3F-202ENST00000413852 CCDC77Q9BR77 488 aa15.42■□□□□ 0.06
SEMA3F-202ENST00000413852 PPP1R12CQ9BZL4 782 aa15.42■□□□□ 0.06
SEMA3F-202ENST00000413852 IVNS1ABPQ9Y6Y0 642 aa15.42■□□□□ 0.06
SEMA3F-202ENST00000413852 TCRBV7S3A2A0A539 114 aa15.42■□□□□ 0.06
SEMA3F-202ENST00000413852 A6NHS1 94 aa15.42■□□□□ 0.06
SEMA3F-202ENST00000413852 P4HBP07237 508 aaKnown RBP15.42■□□□□ 0.06
SEMA3F-202ENST00000413852 GPX6P59796 221 aa15.42■□□□□ 0.06
SEMA3F-202ENST00000413852 MRPS9P82933 396 aaKnown RBP15.42■□□□□ 0.06
SEMA3F-202ENST00000413852 GTF2BQ00403 316 aa15.42■□□□□ 0.06
SEMA3F-202ENST00000413852 STAT4Q14765 748 aa15.42■□□□□ 0.06
SEMA3F-202ENST00000413852 KPNB1Q14974 876 aaKnown RBP15.42■□□□□ 0.06
SEMA3F-202ENST00000413852 NLRX1Q86UT6 975 aa15.42■□□□□ 0.06
SEMA3F-202ENST00000413852 SHKBP1Q8TBC3 707 aa15.42■□□□□ 0.06
SEMA3F-202ENST00000413852 BICD1Q96G01 975 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms