RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 CGNQ9P2M7 1197 aaKnown RBP12.93□□□□□ -0.34
NEDD1-202ENST00000411739 TRAF3IP3Q9Y228 551 aa12.93□□□□□ -0.34
NEDD1-202ENST00000411739 MBTPS2O43462 519 aa12.93□□□□□ -0.34
NEDD1-202ENST00000411739 AKAP3O75969 853 aa12.93□□□□□ -0.34
NEDD1-202ENST00000411739 KIF20AO95235 890 aa12.93□□□□□ -0.34
NEDD1-202ENST00000411739 GLUD1P00367 558 aa12.93□□□□□ -0.34
NEDD1-202ENST00000411739 CST3P01034 146 aaPredicted RBP12.93□□□□□ -0.34
NEDD1-202ENST00000411739 OR4Q2P0C623 313 aa12.93□□□□□ -0.34
NEDD1-202ENST00000411739 BFSP1Q12934 665 aa12.93□□□□□ -0.34
NEDD1-202ENST00000411739 ADAM9Q13443 819 aa12.93□□□□□ -0.34
NEDD1-202ENST00000411739 AAK1Q2M2I8 961 aa12.93□□□□□ -0.34
NEDD1-202ENST00000411739 CTXN3Q4LDR2 81 aa12.93□□□□□ -0.34
NEDD1-202ENST00000411739 TJAP1Q5JTD0 557 aa12.93□□□□□ -0.34
NEDD1-202ENST00000411739 ANKRD40Q6AI12 368 aa12.93□□□□□ -0.34
NEDD1-202ENST00000411739 TMEM184AQ6ZMB5 413 aa12.93□□□□□ -0.34
NEDD1-202ENST00000411739 ADSSL1Q8N142 457 aa12.93□□□□□ -0.34
NEDD1-202ENST00000411739 GPT2Q8TD30 523 aa12.93□□□□□ -0.34
NEDD1-202ENST00000411739 CASP10Q92851 521 aa12.93□□□□□ -0.34
NEDD1-202ENST00000411739 ANKRD36BP1Q96IX9 119 aa12.93□□□□□ -0.34
NEDD1-202ENST00000411739 TSPAN18Q96SJ8 248 aa12.93□□□□□ -0.34
NEDD1-202ENST00000411739 S1PR5Q9H228 398 aa12.93□□□□□ -0.34
NEDD1-202ENST00000411739 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.93□□□□□ -0.34
NEDD1-202ENST00000411739 MTRRQ9UBK8 725 aa12.93□□□□□ -0.34
NEDD1-202ENST00000411739 PCDHB8Q9UN66 801 aa12.93□□□□□ -0.34
NEDD1-202ENST00000411739 USP15Q9Y4E8 981 aaPredicted RBP12.93□□□□□ -0.34
NEDD1-202ENST00000411739 PLXNA3P51805 1871 aa12.92□□□□□ -0.34
NEDD1-202ENST00000411739 LRRIQ3A6PVS8 624 aaPredicted RBP12.92□□□□□ -0.34
NEDD1-202ENST00000411739 CYB561D2O14569 222 aa12.92□□□□□ -0.34
NEDD1-202ENST00000411739 TNNC2P02585 160 aa12.92□□□□□ -0.34
NEDD1-202ENST00000411739 TAF6P49848 677 aa12.92□□□□□ -0.34
NEDD1-202ENST00000411739 STX17P56962 302 aa12.92□□□□□ -0.34
NEDD1-202ENST00000411739 DUOXA2Q1HG44 320 aa12.92□□□□□ -0.34
NEDD1-202ENST00000411739 ZCWPW2Q504Y3 356 aa12.92□□□□□ -0.34
NEDD1-202ENST00000411739 TRAPPC11Q7Z392 1133 aa12.92□□□□□ -0.34
NEDD1-202ENST00000411739 ELOA2Q8IYF1 753 aaPredicted RBP12.92□□□□□ -0.34
NEDD1-202ENST00000411739 BORCS6Q96GS4 357 aa12.92□□□□□ -0.34
NEDD1-202ENST00000411739 CGRRF1Q99675 332 aa12.92□□□□□ -0.34
NEDD1-202ENST00000411739 MMRN2Q9H8L6 949 aa12.92□□□□□ -0.34
NEDD1-202ENST00000411739 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.92□□□□□ -0.34
NEDD1-202ENST00000411739 FNIP2Q9P278 1114 aa12.92□□□□□ -0.34
NEDD1-202ENST00000411739 FBXL5Q9UKA1 691 aa12.92□□□□□ -0.34
NEDD1-202ENST00000411739 M0QZQ0 153 aa12.91□□□□□ -0.34
NEDD1-202ENST00000411739 SYN3O14994 580 aa12.91□□□□□ -0.34
NEDD1-202ENST00000411739 AARSP49588 968 aaKnown RBP eCLIP12.91□□□□□ -0.34
NEDD1-202ENST00000411739 MORC3Q14149 939 aa12.91□□□□□ -0.34
NEDD1-202ENST00000411739 WSCD1Q658N2 575 aa12.91□□□□□ -0.34
NEDD1-202ENST00000411739 ANKS3Q6ZW76 656 aa12.91□□□□□ -0.34
NEDD1-202ENST00000411739 PPFIBP1Q86W92 1011 aa12.91□□□□□ -0.34
NEDD1-202ENST00000411739 NT5DC4Q86YG4 428 aa12.91□□□□□ -0.34
NEDD1-202ENST00000411739 WDR49Q8IV35 697 aa12.91□□□□□ -0.34
NEDD1-202ENST00000411739 SLC9A9Q8IVB4 645 aa12.91□□□□□ -0.34
NEDD1-202ENST00000411739 SMRP1Q8NCR6 262 aa12.91□□□□□ -0.34
NEDD1-202ENST00000411739 ADAMTS19Q8TE59 1207 aa12.91□□□□□ -0.34
NEDD1-202ENST00000411739 TMEM209Q96SK2 561 aa12.91□□□□□ -0.34
NEDD1-202ENST00000411739 FRMD4BQ9Y2L6 1034 aa12.91□□□□□ -0.34
NEDD1-202ENST00000411739 KPNA7A9QM74 516 aa12.91□□□□□ -0.34
NEDD1-202ENST00000411739 PPP1R3GB7ZBB8 358 aa12.91□□□□□ -0.34
NEDD1-202ENST00000411739 TRIM49P0CI25 452 aa12.91□□□□□ -0.34
NEDD1-202ENST00000411739 TRIM49CP0CI26 452 aa12.91□□□□□ -0.34
NEDD1-202ENST00000411739 SRGAP2BP0DMP2 458 aa12.91□□□□□ -0.34
NEDD1-202ENST00000411739 MRPL58Q14197 206 aaKnown RBP12.91□□□□□ -0.34
NEDD1-202ENST00000411739 LILRA6Q6PI73 481 aa12.91□□□□□ -0.34
NEDD1-202ENST00000411739 USP37Q86T82 979 aa12.91□□□□□ -0.34
NEDD1-202ENST00000411739 KREMEN2Q8NCW0 462 aa12.91□□□□□ -0.34
NEDD1-202ENST00000411739 APPL2Q8NEU8 664 aa12.91□□□□□ -0.34
NEDD1-202ENST00000411739 PARD3BQ8TEW8 1205 aa12.91□□□□□ -0.34
NEDD1-202ENST00000411739 CLSTN2Q9H4D0 955 aa12.91□□□□□ -0.34
NEDD1-202ENST00000411739 KIAA1468Q9P260 1216 aa12.91□□□□□ -0.34
NEDD1-202ENST00000411739 HCRTO43612 131 aa12.9□□□□□ -0.34
NEDD1-202ENST00000411739 RBP5P82980 135 aa12.9□□□□□ -0.34
NEDD1-202ENST00000411739 ROR1Q01973 937 aa12.9□□□□□ -0.34
NEDD1-202ENST00000411739 YWHAHQ04917 246 aaPredicted RBP12.9□□□□□ -0.34
NEDD1-202ENST00000411739 SURF1Q15526 300 aa12.9□□□□□ -0.34
NEDD1-202ENST00000411739 CENPPQ6IPU0 288 aa12.9□□□□□ -0.34
NEDD1-202ENST00000411739 PGLYRP2Q96PD5 576 aa12.9□□□□□ -0.34
NEDD1-202ENST00000411739 COL25A1Q9BXS0 654 aaPredicted RBP12.9□□□□□ -0.34
NEDD1-202ENST00000411739 ITGA11Q9UKX5 1188 aa12.9□□□□□ -0.34
NEDD1-202ENST00000411739 CTNND2Q9UQB3 1225 aa12.9□□□□□ -0.34
NEDD1-202ENST00000411739 SNX9Q9Y5X1 595 aa12.9□□□□□ -0.34
NEDD1-202ENST00000411739 WDR27A2RRH5 827 aa12.9□□□□□ -0.34
NEDD1-202ENST00000411739 TBC1D4O60343 1298 aa12.9□□□□□ -0.34
NEDD1-202ENST00000411739 CLSTN1O94985 981 aa12.9□□□□□ -0.34
NEDD1-202ENST00000411739 SMAD4Q13485 552 aaKnown RBP12.9□□□□□ -0.34
NEDD1-202ENST00000411739 BIRC3Q13489 604 aa12.9□□□□□ -0.34
NEDD1-202ENST00000411739 C1orf220Q5T0J3 134 aa12.9□□□□□ -0.34
NEDD1-202ENST00000411739 OVOS1Q6IE37 1185 aa12.9□□□□□ -0.34
NEDD1-202ENST00000411739 FAM186BQ8IYM0 893 aa12.9□□□□□ -0.34
NEDD1-202ENST00000411739 HPDLQ96IR7 371 aa12.9□□□□□ -0.34
NEDD1-202ENST00000411739 R3HCC1Q9Y3T6 440 aaKnown RBP12.9□□□□□ -0.34
NEDD1-202ENST00000411739 BACE2Q9Y5Z0 518 aa12.9□□□□□ -0.34
NEDD1-202ENST00000411739 CCDC195A0A1B0GUA6 201 aa12.89□□□□□ -0.35
NEDD1-202ENST00000411739 PHACTR2O75167 634 aa12.89□□□□□ -0.35
NEDD1-202ENST00000411739 ODC1P11926 461 aa12.89□□□□□ -0.35
NEDD1-202ENST00000411739 MYL6P60660 151 aa12.89□□□□□ -0.35
NEDD1-202ENST00000411739 RAB33AQ14088 237 aa12.89□□□□□ -0.35
NEDD1-202ENST00000411739 SV2CQ496J9 727 aa12.89□□□□□ -0.35
NEDD1-202ENST00000411739 TDRD10Q5VZ19 366 aaKnown RBP12.89□□□□□ -0.35
NEDD1-202ENST00000411739 ZNF280DQ6N043 979 aa12.89□□□□□ -0.35
NEDD1-202ENST00000411739 NELFBQ8WX92 580 aa12.89□□□□□ -0.35
NEDD1-202ENST00000411739 CD320Q9NPF0 282 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms