RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 RAB23Q9ULC3 237 aa15.55■□□□□ 0.08
HLA-DQB2-229ENST00000411527 PCDHB6Q9Y5E3 794 aa15.55■□□□□ 0.08
HLA-DQB2-229ENST00000411527 TIMM13Q9Y5L4 95 aaPredicted RBP15.55■□□□□ 0.08
HLA-DQB2-229ENST00000411527 DCDC2BA2VCK2 349 aa15.54■□□□□ 0.08
HLA-DQB2-229ENST00000411527 TOM1L1O75674 476 aa15.54■□□□□ 0.08
HLA-DQB2-229ENST00000411527 CCNE1P24864 410 aa15.54■□□□□ 0.08
HLA-DQB2-229ENST00000411527 CCR3P51677 355 aa15.54■□□□□ 0.08
HLA-DQB2-229ENST00000411527 HMGN5P82970 282 aaKnown RBP15.54■□□□□ 0.08
HLA-DQB2-229ENST00000411527 SPAG1Q07617 926 aa15.54■□□□□ 0.08
HLA-DQB2-229ENST00000411527 NOLC1Q14978 699 aaKnown RBP eCLIP15.54■□□□□ 0.08
HLA-DQB2-229ENST00000411527 IL17AQ16552 155 aa15.54■□□□□ 0.08
HLA-DQB2-229ENST00000411527 KCNK18Q7Z418 384 aa15.54■□□□□ 0.08
HLA-DQB2-229ENST00000411527 TMEM130Q8N3G9 435 aa15.54■□□□□ 0.08
HLA-DQB2-229ENST00000411527 CELF5Q8N6W0 485 aaKnown RBP15.54■□□□□ 0.08
HLA-DQB2-229ENST00000411527 CSGALNACT1Q8TDX6 532 aa15.54■□□□□ 0.08
HLA-DQB2-229ENST00000411527 CNTNAP3BQ96NU0 1288 aa15.54■□□□□ 0.08
HLA-DQB2-229ENST00000411527 CNTNAP3Q9BZ76 1288 aa15.54■□□□□ 0.08
HLA-DQB2-229ENST00000411527 GPR88Q9GZN0 384 aa15.54■□□□□ 0.08
HLA-DQB2-229ENST00000411527 PARD6AQ9NPB6 346 aa15.54■□□□□ 0.08
HLA-DQB2-229ENST00000411527 NCANO14594 1321 aa15.53■□□□□ 0.08
HLA-DQB2-229ENST00000411527 HEPACAM2A8MVW5 462 aa15.53■□□□□ 0.08
HLA-DQB2-229ENST00000411527 M0QZQ0 153 aa15.53■□□□□ 0.08
HLA-DQB2-229ENST00000411527 CLDN3O15551 220 aa15.53■□□□□ 0.08
HLA-DQB2-229ENST00000411527 OAZ2O95190 189 aa15.53■□□□□ 0.08
HLA-DQB2-229ENST00000411527 OR4Q2P0C623 313 aa15.53■□□□□ 0.08
HLA-DQB2-229ENST00000411527 CHRNB1P11230 501 aa15.53■□□□□ 0.08
HLA-DQB2-229ENST00000411527 U2AF2P26368 475 aaKnown RBP eCLIP15.53■□□□□ 0.08
HLA-DQB2-229ENST00000411527 MATR3P43243 847 aaKnown RBP eCLIP15.53■□□□□ 0.08
HLA-DQB2-229ENST00000411527 CXCL12P48061 93 aa15.53■□□□□ 0.08
HLA-DQB2-229ENST00000411527 SMTNP53814 917 aa15.53■□□□□ 0.08
HLA-DQB2-229ENST00000411527 SATB1Q01826 763 aa15.53■□□□□ 0.08
HLA-DQB2-229ENST00000411527 YWHAHQ04917 246 aaPredicted RBP15.53■□□□□ 0.08
HLA-DQB2-229ENST00000411527 SPEM2Q0P670 501 aa15.53■□□□□ 0.08
HLA-DQB2-229ENST00000411527 ZRSR1Q15695 479 aaKnown RBP15.53■□□□□ 0.08
HLA-DQB2-229ENST00000411527 LAIR1Q6GTX8 287 aa15.53■□□□□ 0.08
HLA-DQB2-229ENST00000411527 DTHD1Q6ZMT9 781 aa15.53■□□□□ 0.08
HLA-DQB2-229ENST00000411527 PRR23BQ6ZRT6 265 aa15.53■□□□□ 0.08
HLA-DQB2-229ENST00000411527 YAF2Q8IY57 180 aa15.53■□□□□ 0.08
HLA-DQB2-229ENST00000411527 TMEM161BQ8NDZ6 487 aa15.53■□□□□ 0.08
HLA-DQB2-229ENST00000411527 SHKBP1Q8TBC3 707 aa15.53■□□□□ 0.08
HLA-DQB2-229ENST00000411527 SPIRE2Q8WWL2 714 aa15.53■□□□□ 0.08
HLA-DQB2-229ENST00000411527 E2F7Q96AV8 911 aa15.53■□□□□ 0.08
HLA-DQB2-229ENST00000411527 PGLYRP2Q96PD5 576 aa15.53■□□□□ 0.08
HLA-DQB2-229ENST00000411527 RTKNQ9BST9 563 aa15.53■□□□□ 0.08
HLA-DQB2-229ENST00000411527 MMTAG2Q9BU76 263 aaKnown RBP15.53■□□□□ 0.08
HLA-DQB2-229ENST00000411527 TIPINQ9BVW5 301 aa15.53■□□□□ 0.08
HLA-DQB2-229ENST00000411527 KCNG1Q9UIX4 513 aa15.53■□□□□ 0.08
HLA-DQB2-229ENST00000411527 YIPF1Q9Y548 306 aa15.53■□□□□ 0.08
HLA-DQB2-229ENST00000411527 NCOR2Q9Y618 2525 aa15.52■□□□□ 0.08
HLA-DQB2-229ENST00000411527 A0A1W2PRU2 124 aa15.52■□□□□ 0.08
HLA-DQB2-229ENST00000411527 LAD1O00515 517 aa15.52■□□□□ 0.08
HLA-DQB2-229ENST00000411527 EIF5BO60841 1220 aaKnown RBP15.52■□□□□ 0.08
HLA-DQB2-229ENST00000411527 SEC24BO95487 1268 aa15.52■□□□□ 0.08
HLA-DQB2-229ENST00000411527 VNN2O95498 520 aa15.52■□□□□ 0.08
HLA-DQB2-229ENST00000411527 CXCL8P10145 99 aa15.52■□□□□ 0.08
HLA-DQB2-229ENST00000411527 MAPTP10636 758 aaKnown RBP15.52■□□□□ 0.08
HLA-DQB2-229ENST00000411527 PLS3P13797 630 aa15.52■□□□□ 0.08
HLA-DQB2-229ENST00000411527 GUCY2CP25092 1073 aa15.52■□□□□ 0.08
HLA-DQB2-229ENST00000411527 DUSP4Q13115 394 aa15.52■□□□□ 0.08
HLA-DQB2-229ENST00000411527 ZPBP2Q6X784 338 aa15.52■□□□□ 0.08
HLA-DQB2-229ENST00000411527 USP37Q86T82 979 aa15.52■□□□□ 0.08
HLA-DQB2-229ENST00000411527 GPIHBP1Q8IV16 184 aa15.52■□□□□ 0.08
HLA-DQB2-229ENST00000411527 BEST2Q8NFU1 509 aa15.52■□□□□ 0.08
HLA-DQB2-229ENST00000411527 RSPRY1Q96DX4 576 aa15.52■□□□□ 0.08
HLA-DQB2-229ENST00000411527 LRRC3Q9BY71 257 aa15.52■□□□□ 0.08
HLA-DQB2-229ENST00000411527 OXCT2Q9BYC2 517 aaPredicted RBP15.52■□□□□ 0.08
HLA-DQB2-229ENST00000411527 PLEKHA5Q9HAU0 1116 aa15.52■□□□□ 0.08
HLA-DQB2-229ENST00000411527 RALGAPA1Q6GYQ0 2036 aa15.51■□□□□ 0.07
HLA-DQB2-229ENST00000411527 ARNTLO00327 626 aa15.51■□□□□ 0.07
HLA-DQB2-229ENST00000411527 CHADO15335 359 aa15.51■□□□□ 0.07
HLA-DQB2-229ENST00000411527 CLTAP09496 248 aa15.51■□□□□ 0.07
HLA-DQB2-229ENST00000411527 LRPAP1P30533 357 aa15.51■□□□□ 0.07
HLA-DQB2-229ENST00000411527 PRPHP41219 470 aa15.51■□□□□ 0.07
HLA-DQB2-229ENST00000411527 ALDH1A3P47895 512 aa15.51■□□□□ 0.07
HLA-DQB2-229ENST00000411527 SOX9P48436 509 aa15.51■□□□□ 0.07
HLA-DQB2-229ENST00000411527 KPNA1P52294 538 aaPredicted RBP15.51■□□□□ 0.07
HLA-DQB2-229ENST00000411527 EPHB3P54753 998 aa15.51■□□□□ 0.07
HLA-DQB2-229ENST00000411527 MLLT6P55198 1093 aaPredicted RBP15.51■□□□□ 0.07
HLA-DQB2-229ENST00000411527 MCL1Q07820 350 aa15.51■□□□□ 0.07
HLA-DQB2-229ENST00000411527 GPR17Q13304 367 aa15.51■□□□□ 0.07
HLA-DQB2-229ENST00000411527 PLD1Q13393 1074 aa15.51■□□□□ 0.07
HLA-DQB2-229ENST00000411527 GAS6Q14393 721 aa15.51■□□□□ 0.07
HLA-DQB2-229ENST00000411527 DSTYKQ6XUX3 929 aa15.51■□□□□ 0.07
HLA-DQB2-229ENST00000411527 SPEM1Q8N4L4 309 aa15.51■□□□□ 0.07
HLA-DQB2-229ENST00000411527 KIF12Q96FN5 646 aa15.51■□□□□ 0.07
HLA-DQB2-229ENST00000411527 ZSCAN31Q96LW9 406 aaPredicted RBP15.51■□□□□ 0.07
HLA-DQB2-229ENST00000411527 PLIN2Q99541 437 aa15.51■□□□□ 0.07
HLA-DQB2-229ENST00000411527 HAPLN2Q9GZV7 340 aa15.51■□□□□ 0.07
HLA-DQB2-229ENST00000411527 DNAJC25Q9H1X3 360 aa15.51■□□□□ 0.07
HLA-DQB2-229ENST00000411527 CRISPLD1Q9H336 500 aa15.51■□□□□ 0.07
HLA-DQB2-229ENST00000411527 RBM12Q9NTZ6 932 aaKnown RBP15.51■□□□□ 0.07
HLA-DQB2-229ENST00000411527 UBQLN1Q9UMX0 589 aaKnown RBP15.51■□□□□ 0.07
HLA-DQB2-229ENST00000411527 SLC27A5Q9Y2P5 690 aa15.51■□□□□ 0.07
HLA-DQB2-229ENST00000411527 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.51■□□□□ 0.07
HLA-DQB2-229ENST00000411527 TTC26A0AVF1 554 aa15.5■□□□□ 0.07
HLA-DQB2-229ENST00000411527 OR6C75A6NL08 312 aa15.5■□□□□ 0.07
HLA-DQB2-229ENST00000411527 SLC38A8A6NNN8 435 aa15.5■□□□□ 0.07
HLA-DQB2-229ENST00000411527 CHURC1-FNTBB4DL54 471 aa15.5■□□□□ 0.07
HLA-DQB2-229ENST00000411527 RETP07949 1114 aa15.5■□□□□ 0.07
HLA-DQB2-229ENST00000411527 CYP3A5P20815 502 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms