RNA–Protein interactions for RNA: ENST00000411092.1

RNU6-55P-201, Transcript of RNA, U6 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU6-55P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-55P-201ENST00000411092 MRFAP1Q9Y605 127 aa3.96□□□□□ -1.78
RNU6-55P-201ENST00000411092 RREB1Q92766 1687 aa3.96□□□□□ -1.78
RNU6-55P-201ENST00000411092 ANKRD36CQ5JPF3 1778 aa3.96□□□□□ -1.78
RNU6-55P-201ENST00000411092 MROH7-TTC4A0A0A0MT08 1334 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 ITIH6Q6UXX5 1313 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 LRP5O75197 1615 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 MYH6P13533 1939 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 AKAP11Q9UKA4 1901 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 BCL9LQ86UU0 1499 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 KLF18A0A0U1RQI7 1052 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 CCDC196A0A1B0GTZ2 297 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 VWA3AA6NCI4 1184 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 SCDO00767 359 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 MAP2K7O14733 419 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 CDC14BO60729 498 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 FZD7O75084 574 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 URI1O94763 535 aaPredicted RBP3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 MPIG6BO95866 241 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 SLPIP03973 132 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 HMGCRP04035 888 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 IFIT1P09914 478 aaKnown RBP3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 PHKG2P15735 406 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 CR2P20023 1033 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 COMTP21964 271 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 LIFRP42702 1097 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 METAP2P50579 478 aaKnown RBP eCLIP3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 PLCD1P51178 756 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 CCT2P78371 535 aaKnown RBP3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 AIMP1Q12904 312 aaKnown RBP3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 SERINC3Q13530 473 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 SMC1AQ14683 1233 aaKnown RBP3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 PTPAQ15257 358 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 UBE3CQ15386 1083 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 ALX1Q15699 326 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 TBR1Q16650 682 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 MAP9Q49MG5 647 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 EPHA10Q5JZY3 1008 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 TTC39AQ5SRH9 613 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 AGBL4Q5VU57 503 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 LMBR1LQ6UX01 489 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 LEKR1Q6ZMV7 388 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 CCDC129Q6ZRS4 1044 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 LARP4Q71RC2 724 aaKnown RBP eCLIP3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 CXXC5Q7LFL8 322 aaKnown RBP3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 ATG9AQ7Z3C6 839 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 SRGAP1Q7Z6B7 1085 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 NOSTRINQ8IVI9 506 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 MSANTD4Q8NCY6 345 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 CTCFLQ8NI51 663 aaPredicted RBP3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 SPATA20Q8TB22 786 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 SMARCE1Q969G3 411 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 WNK4Q96J92 1243 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 SCYL1Q96KG9 808 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 RPGRIP1Q96KN7 1286 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 DEPDC7Q96QD5 511 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 MAP3K14Q99558 947 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 DPYSL5Q9BPU6 564 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 BTBD2Q9BX70 525 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 PLA2G12BQ9BX93 195 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 AMNQ9BXJ7 453 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 KRTAP9-8Q9BYQ0 159 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 FTOQ9C0B1 505 aaKnown RBP eCLIP3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 KIAA1683Q9H0B3 1180 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 HSD3B7Q9H2F3 369 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 FOXP1Q9H334 677 aaPredicted RBP3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 C12orf65Q9H3J6 166 aaKnown RBP3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 VIPAS39Q9H9C1 493 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 FBXO10Q9UK96 956 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 CDC42EP3Q9UKI2 254 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 COQ6Q9Y2Z9 468 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 NR2E1Q9Y466 385 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 HS3ST3A1Q9Y663 406 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 CLIC4Q9Y696 253 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 MYH2Q9UKX2 1941 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 MEGF6O75095 1541 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 TNS2Q63HR2 1409 aa3.95□□□□□ -1.78
RNU6-55P-201ENST00000411092 PLCH1Q4KWH8 1693 aa3.94□□□□□ -1.78
RNU6-55P-201ENST00000411092 A0A1B0GUL7 405 aa3.94□□□□□ -1.78
RNU6-55P-201ENST00000411092 CTAGE9A4FU28 777 aa3.94□□□□□ -1.78
RNU6-55P-201ENST00000411092 A6NNZ2 444 aa3.94□□□□□ -1.78
RNU6-55P-201ENST00000411092 AKR1B15C9JRZ8 316 aaPredicted RBP3.94□□□□□ -1.78
RNU6-55P-201ENST00000411092 M0R2C6 588 aa3.94□□□□□ -1.78
RNU6-55P-201ENST00000411092 MATN2O00339 956 aa3.94□□□□□ -1.78
RNU6-55P-201ENST00000411092 CYR61O00622 381 aa3.94□□□□□ -1.78
RNU6-55P-201ENST00000411092 SH2B2O14492 632 aaPredicted RBP3.94□□□□□ -1.78
RNU6-55P-201ENST00000411092 ZNF213O14771 459 aa3.94□□□□□ -1.78
RNU6-55P-201ENST00000411092 ZBTB43O43298 467 aa3.94□□□□□ -1.78
RNU6-55P-201ENST00000411092 SUV39H1O43463 412 aa3.94□□□□□ -1.78
RNU6-55P-201ENST00000411092 CLSTN1O94985 981 aa3.94□□□□□ -1.78
RNU6-55P-201ENST00000411092 MMEP08473 750 aa3.94□□□□□ -1.78
RNU6-55P-201ENST00000411092 ATP1A3P13637 1013 aa3.94□□□□□ -1.78
RNU6-55P-201ENST00000411092 IFNAR1P17181 557 aa3.94□□□□□ -1.78
RNU6-55P-201ENST00000411092 XBP1P17861 261 aa3.94□□□□□ -1.78
RNU6-55P-201ENST00000411092 OAS2P29728 719 aaKnown RBP3.94□□□□□ -1.78
RNU6-55P-201ENST00000411092 HOXA7P31268 230 aaPredicted RBP3.94□□□□□ -1.78
RNU6-55P-201ENST00000411092 ACTN2P35609 894 aa3.94□□□□□ -1.78
RNU6-55P-201ENST00000411092 ECE1P42892 770 aa3.94□□□□□ -1.78
RNU6-55P-201ENST00000411092 NT5C2P49902 561 aa3.94□□□□□ -1.78
RNU6-55P-201ENST00000411092 HMGA2P52926 109 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms