RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 AFF1P51825 1210 aaKnown RBP13.33□□□□□ -0.27
CHMP3-204ENST00000409727 NAP1L1P55209 391 aaKnown RBP13.33□□□□□ -0.27
CHMP3-204ENST00000409727 NAB2Q15742 525 aa13.33□□□□□ -0.27
CHMP3-204ENST00000409727 HACE1Q8IYU2 909 aa13.33□□□□□ -0.27
CHMP3-204ENST00000409727 TAF4BQ92750 862 aa13.33□□□□□ -0.27
CHMP3-204ENST00000409727 MMS19Q96T76 1030 aa13.33□□□□□ -0.27
CHMP3-204ENST00000409727 GAD1Q99259 594 aa13.33□□□□□ -0.27
CHMP3-204ENST00000409727 TSGA10Q9BZW7 698 aa13.33□□□□□ -0.27
CHMP3-204ENST00000409727 SMYD3Q9H7B4 428 aa13.33□□□□□ -0.27
CHMP3-204ENST00000409727 RALGAPA2Q2PPJ7 1873 aa13.33□□□□□ -0.28
CHMP3-204ENST00000409727 HSPA1AP0DMV8 641 aaKnown RBP13.33□□□□□ -0.28
CHMP3-204ENST00000409727 HSPA1BP0DMV9 641 aaKnown RBP13.33□□□□□ -0.28
CHMP3-204ENST00000409727 SELPP16109 830 aa13.33□□□□□ -0.28
CHMP3-204ENST00000409727 TNNC1P63316 161 aa13.33□□□□□ -0.28
CHMP3-204ENST00000409727 ORC1Q13415 861 aa13.33□□□□□ -0.28
CHMP3-204ENST00000409727 ZBTB6Q15916 424 aa13.33□□□□□ -0.28
CHMP3-204ENST00000409727 USP38Q8NB14 1042 aa13.33□□□□□ -0.28
CHMP3-204ENST00000409727 KIF18AQ8NI77 898 aa13.33□□□□□ -0.28
CHMP3-204ENST00000409727 CAGE1Q8TC20 777 aa13.33□□□□□ -0.28
CHMP3-204ENST00000409727 RPS6KC1Q96S38 1066 aa13.33□□□□□ -0.28
CHMP3-204ENST00000409727 PCDHB18PQ96TA0 734 aa13.33□□□□□ -0.28
CHMP3-204ENST00000409727 CACNG4Q9UBN1 327 aa13.33□□□□□ -0.28
CHMP3-204ENST00000409727 UBQLN1Q9UMX0 589 aaKnown RBP13.33□□□□□ -0.28
CHMP3-204ENST00000409727 PTGESO14684 152 aa13.32□□□□□ -0.28
CHMP3-204ENST00000409727 TLR3O15455 904 aaKnown RBP13.32□□□□□ -0.28
CHMP3-204ENST00000409727 BUB1O43683 1085 aa13.32□□□□□ -0.28
CHMP3-204ENST00000409727 MOCS3O95396 460 aa13.32□□□□□ -0.28
CHMP3-204ENST00000409727 CD4P01730 458 aa13.32□□□□□ -0.28
CHMP3-204ENST00000409727 ABCB4P21439 1286 aa13.32□□□□□ -0.28
CHMP3-204ENST00000409727 ANXA13P27216 316 aa13.32□□□□□ -0.28
CHMP3-204ENST00000409727 GNA15P30679 374 aa13.32□□□□□ -0.28
CHMP3-204ENST00000409727 CASQ1P31415 396 aa13.32□□□□□ -0.28
CHMP3-204ENST00000409727 ATICP31939 592 aa13.32□□□□□ -0.28
CHMP3-204ENST00000409727 MNX1P50219 401 aaPredicted RBP13.32□□□□□ -0.28
CHMP3-204ENST00000409727 FMO1Q01740 532 aa13.32□□□□□ -0.28
CHMP3-204ENST00000409727 CDR2Q01850 454 aa13.32□□□□□ -0.28
CHMP3-204ENST00000409727 SOX4Q06945 474 aaPredicted RBP13.32□□□□□ -0.28
CHMP3-204ENST00000409727 MYO1EQ12965 1108 aa13.32□□□□□ -0.28
CHMP3-204ENST00000409727 BFSP2Q13515 415 aa13.32□□□□□ -0.28
CHMP3-204ENST00000409727 DSC3Q14574 896 aa13.32□□□□□ -0.28
CHMP3-204ENST00000409727 C9orf57Q5W0N0 161 aa13.32□□□□□ -0.28
CHMP3-204ENST00000409727 SLC39A5Q6ZMH5 540 aa13.32□□□□□ -0.28
CHMP3-204ENST00000409727 AGMOQ6ZNB7 445 aa13.32□□□□□ -0.28
CHMP3-204ENST00000409727 SLC35F6Q8N357 371 aa13.32□□□□□ -0.28
CHMP3-204ENST00000409727 SECISBP2LQ93073 1101 aaKnown RBP13.32□□□□□ -0.28
CHMP3-204ENST00000409727 CRISPLD2Q9H0B8 497 aa13.32□□□□□ -0.28
CHMP3-204ENST00000409727 SDCBP2Q9H190 292 aa13.32□□□□□ -0.28
CHMP3-204ENST00000409727 PDCL3Q9H2J4 239 aa13.32□□□□□ -0.28
CHMP3-204ENST00000409727 ARL5CA6NH57 179 aa13.31□□□□□ -0.28
CHMP3-204ENST00000409727 THAP12O43422 761 aa13.31□□□□□ -0.28
CHMP3-204ENST00000409727 KCNE1P15382 129 aa13.31□□□□□ -0.28
CHMP3-204ENST00000409727 TRIM60Q495X7 471 aa13.31□□□□□ -0.28
CHMP3-204ENST00000409727 XKR4Q5GH76 650 aa13.31□□□□□ -0.28
CHMP3-204ENST00000409727 PASD1Q8IV76 773 aa13.31□□□□□ -0.28
CHMP3-204ENST00000409727 TXLNBQ8N3L3 684 aa13.31□□□□□ -0.28
CHMP3-204ENST00000409727 UBR7Q8N806 425 aa13.31□□□□□ -0.28
CHMP3-204ENST00000409727 DDX1Q92499 740 aaKnown RBP13.31□□□□□ -0.28
CHMP3-204ENST00000409727 PPP1R12CQ9BZL4 782 aa13.31□□□□□ -0.28
CHMP3-204ENST00000409727 SALL4Q9UJQ4 1053 aa13.31□□□□□ -0.28
CHMP3-204ENST00000409727 NENFQ9UMX5 172 aa13.31□□□□□ -0.28
CHMP3-204ENST00000409727 INPP5FQ9Y2H2 1132 aa13.31□□□□□ -0.28
CHMP3-204ENST00000409727 SNX9Q9Y5X1 595 aa13.31□□□□□ -0.28
CHMP3-204ENST00000409727 A0A0U1RQF3 1178 aa13.31□□□□□ -0.28
CHMP3-204ENST00000409727 XPOTO43592 962 aaKnown RBP13.31□□□□□ -0.28
CHMP3-204ENST00000409727 NBNO60934 754 aa13.31□□□□□ -0.28
CHMP3-204ENST00000409727 CFHP08603 1231 aa13.31□□□□□ -0.28
CHMP3-204ENST00000409727 H2AFZP0C0S5 128 aa13.31□□□□□ -0.28
CHMP3-204ENST00000409727 P4HA1P13674 534 aa13.31□□□□□ -0.28
CHMP3-204ENST00000409727 RAB27AP51159 221 aa13.31□□□□□ -0.28
CHMP3-204ENST00000409727 SCNN1GP51170 649 aa13.31□□□□□ -0.28
CHMP3-204ENST00000409727 GALCP54803 685 aa13.31□□□□□ -0.28
CHMP3-204ENST00000409727 BPIFB4P59827 614 aa13.31□□□□□ -0.28
CHMP3-204ENST00000409727 C10orf76Q5T2E6 689 aa13.31□□□□□ -0.28
CHMP3-204ENST00000409727 ZNF662Q6ZS27 426 aa13.31□□□□□ -0.28
CHMP3-204ENST00000409727 H2AFVQ71UI9 128 aa13.31□□□□□ -0.28
CHMP3-204ENST00000409727 RABGGTAQ92696 567 aa13.31□□□□□ -0.28
CHMP3-204ENST00000409727 BCO2Q9BYV7 579 aa13.31□□□□□ -0.28
CHMP3-204ENST00000409727 MIOSQ9NXC5 875 aa13.31□□□□□ -0.28
CHMP3-204ENST00000409727 HMGXB4Q9UGU5 601 aa13.31□□□□□ -0.28
CHMP3-204ENST00000409727 SQORQ9Y6N5 450 aa13.31□□□□□ -0.28
CHMP3-204ENST00000409727 CAPN6Q9Y6Q1 641 aa13.31□□□□□ -0.28
CHMP3-204ENST00000409727 PJA2O43164 708 aa13.3□□□□□ -0.28
CHMP3-204ENST00000409727 POMCP01189 267 aa13.3□□□□□ -0.28
CHMP3-204ENST00000409727 FTLP02792 175 aaPredicted RBP13.3□□□□□ -0.28
CHMP3-204ENST00000409727 ATF7P17544 494 aaPredicted RBP13.3□□□□□ -0.28
CHMP3-204ENST00000409727 BRD2P25440 801 aaKnown RBP13.3□□□□□ -0.28
CHMP3-204ENST00000409727 CTCFP49711 727 aaPredicted RBP13.3□□□□□ -0.28
CHMP3-204ENST00000409727 CCL23P55773 120 aa13.3□□□□□ -0.28
CHMP3-204ENST00000409727 YWHAEP62258 255 aaKnown RBP13.3□□□□□ -0.28
CHMP3-204ENST00000409727 RTN4RL1Q86UN2 441 aaPredicted RBP13.3□□□□□ -0.28
CHMP3-204ENST00000409727 GSTCDQ8NEC7 633 aa13.3□□□□□ -0.28
CHMP3-204ENST00000409727 ARMC5Q96C12 935 aa13.3□□□□□ -0.28
CHMP3-204ENST00000409727 SCLYQ96I15 445 aa13.3□□□□□ -0.28
CHMP3-204ENST00000409727 PPP1R10Q96QC0 940 aaKnown RBP13.3□□□□□ -0.28
CHMP3-204ENST00000409727 SEZ6LQ9BYH1 1024 aa13.3□□□□□ -0.28
CHMP3-204ENST00000409727 THAP2Q9H0W7 228 aa13.3□□□□□ -0.28
CHMP3-204ENST00000409727 VRTNQ9H8Y1 702 aa13.3□□□□□ -0.28
CHMP3-204ENST00000409727 RSAD1Q9HA92 442 aa13.3□□□□□ -0.28
CHMP3-204ENST00000409727 CNTN6Q9UQ52 1028 aa13.3□□□□□ -0.28
CHMP3-204ENST00000409727 ATP11BQ9Y2G3 1177 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms