RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 GGCXP38435 758 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 MAP3K7CLP57077 242 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 MTFR1Q15390 333 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 MAP7D3Q8IWC1 876 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 MGARPQ8TDB4 240 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 TRIB2Q92519 343 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 EDEM1Q92611 657 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 EIF2AQ9BY44 585 aaKnown RBP12.09□□□□□ -0.47
SNX13-202ENST00000409604 IQCGQ9H095 443 aaKnown RBP12.09□□□□□ -0.47
SNX13-202ENST00000409604 GOLGA6AQ9NYA3 693 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 SRRDQ9UH36 339 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 PCDHB2Q9Y5E7 798 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 UBR2Q8IWV8 1755 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 DHX15O43143 795 aaKnown RBP12.09□□□□□ -0.47
SNX13-202ENST00000409604 SEPT4O43236 478 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 RABGGTBP53611 331 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 CDH6P55285 790 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 DAB2IPQ5VWQ8 1189 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 MAP4K3Q8IVH8 894 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 TMEM192Q8IY95 271 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 HIPK3Q9H422 1215 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 VPS18Q9P253 973 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 M0R2N6 131 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 GAS2O43903 313 aaKnown RBP12.09□□□□□ -0.47
SNX13-202ENST00000409604 AP1G2O75843 785 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 HEXIM1O94992 359 aaKnown RBP12.09□□□□□ -0.47
SNX13-202ENST00000409604 SLCO1A2P46721 670 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 NDST1P52848 882 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 SLC18A3Q16572 532 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 MDH1BQ5I0G3 518 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 LLGL2Q6P1M3 1020 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 IGFLR1Q9H665 355 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 INTS13Q9NVM9 706 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 GPATCH2LQ9NWQ4 482 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 SMPD4Q9NXE4 827 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 SNX24Q9Y343 169 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 SCN9AQ15858 1988 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 ABCA3Q99758 1704 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 SYNGAP1Q96PV0 1343 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 RNF225M0QZC1 329 aaPredicted RBP12.09□□□□□ -0.47
SNX13-202ENST00000409604 GARTP22102 1010 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 WEE1P30291 646 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 BRCC3P46736 316 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 CDC42EP1Q00587 391 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 SEMA3FQ13275 785 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 FBXO47Q5MNV8 452 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 C12orf29Q8N999 325 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 ST13P5Q8NFI4 369 aaPredicted RBP12.09□□□□□ -0.47
SNX13-202ENST00000409604 SMYD3Q9H7B4 428 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 SUDS3Q9H7L9 328 aaPredicted RBP12.09□□□□□ -0.47
SNX13-202ENST00000409604 MINDY3Q9H8M7 445 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 RSAD1Q9HA92 442 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 DUOX1Q9NRD9 1551 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 ARHGAP20Q9P2F6 1191 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 JRKLQ9Y4A0 524 aa12.09□□□□□ -0.47
SNX13-202ENST00000409604 COL4A1P02462 1669 aa12.08□□□□□ -0.48
SNX13-202ENST00000409604 TNRC6CQ9HCJ0 1690 aaKnown RBP12.08□□□□□ -0.48
SNX13-202ENST00000409604 ENDOD1O94919 500 aa12.08□□□□□ -0.48
SNX13-202ENST00000409604 MAN1A1P33908 653 aa12.08□□□□□ -0.48
SNX13-202ENST00000409604 KCNJ1P48048 391 aa12.08□□□□□ -0.48
SNX13-202ENST00000409604 KCTD16Q68DU8 428 aa12.08□□□□□ -0.48
SNX13-202ENST00000409604 ZNF571Q7Z3V5 609 aaPredicted RBP12.08□□□□□ -0.48
SNX13-202ENST00000409604 RBM23Q86U06 439 aaKnown RBP12.08□□□□□ -0.48
SNX13-202ENST00000409604 DNAAF3Q8N9W5 541 aa12.08□□□□□ -0.48
SNX13-202ENST00000409604 MKNK1Q9BUB5 465 aa12.08□□□□□ -0.48
SNX13-202ENST00000409604 UNC93B1Q9H1C4 597 aa12.08□□□□□ -0.48
SNX13-202ENST00000409604 CPSF3Q9UKF6 684 aaKnown RBP12.08□□□□□ -0.48
SNX13-202ENST00000409604 FAN1Q9Y2M0 1017 aa12.08□□□□□ -0.48
SNX13-202ENST00000409604 TRPV2Q9Y5S1 764 aa12.08□□□□□ -0.48
SNX13-202ENST00000409604 DUSP11O75319 330 aaKnown RBP12.08□□□□□ -0.48
SNX13-202ENST00000409604 CD4P01730 458 aa12.08□□□□□ -0.48
SNX13-202ENST00000409604 RRM1P23921 792 aa12.08□□□□□ -0.48
SNX13-202ENST00000409604 ARHGAP1Q07960 439 aa12.08□□□□□ -0.48
SNX13-202ENST00000409604 CTXN3Q4LDR2 81 aa12.08□□□□□ -0.48
SNX13-202ENST00000409604 LEKR1Q6ZMV7 388 aa12.08□□□□□ -0.48
SNX13-202ENST00000409604 PADI3Q9ULW8 664 aa12.08□□□□□ -0.48
SNX13-202ENST00000409604 PGRMC1O00264 195 aaKnown RBP12.08□□□□□ -0.48
SNX13-202ENST00000409604 STK10O94804 968 aaKnown RBP12.08□□□□□ -0.48
SNX13-202ENST00000409604 ALDH2P05091 517 aa12.08□□□□□ -0.48
SNX13-202ENST00000409604 MYZAPP0CAP1 466 aa12.08□□□□□ -0.48
SNX13-202ENST00000409604 MAPTP10636 758 aaKnown RBP12.08□□□□□ -0.48
SNX13-202ENST00000409604 NCAM1P13591 858 aa12.08□□□□□ -0.48
SNX13-202ENST00000409604 PTENP60484 403 aa12.08□□□□□ -0.48
SNX13-202ENST00000409604 IFT20Q8IY31 132 aa12.08□□□□□ -0.48
SNX13-202ENST00000409604 DBF4BQ8NFT6 615 aa12.08□□□□□ -0.48
SNX13-202ENST00000409604 SLC7A14Q8TBB6 771 aa12.08□□□□□ -0.48
SNX13-202ENST00000409604 USP33Q8TEY7 942 aa12.08□□□□□ -0.48
SNX13-202ENST00000409604 DDX43Q9NXZ2 648 aaKnown RBP12.08□□□□□ -0.48
SNX13-202ENST00000409604 NOC2LQ9Y3T9 749 aaKnown RBP12.08□□□□□ -0.48
SNX13-202ENST00000409604 NHSQ6T4R5 1651 aa12.07□□□□□ -0.48
SNX13-202ENST00000409604 ZNF500O60304 480 aaPredicted RBP12.07□□□□□ -0.48
SNX13-202ENST00000409604 IL18RAPO95256 599 aa12.07□□□□□ -0.48
SNX13-202ENST00000409604 CYP11B1P15538 503 aa12.07□□□□□ -0.48
SNX13-202ENST00000409604 GTF2F1P35269 517 aaKnown RBP eCLIP12.07□□□□□ -0.48
SNX13-202ENST00000409604 RWDD2BP57060 319 aa12.07□□□□□ -0.48
SNX13-202ENST00000409604 MRPS6P82932 125 aaKnown RBP12.07□□□□□ -0.48
SNX13-202ENST00000409604 PLPPR4Q7Z2D5 763 aa12.07□□□□□ -0.48
SNX13-202ENST00000409604 SCUBE3Q8IX30 993 aa12.07□□□□□ -0.48
SNX13-202ENST00000409604 ADGRF2Q8IZF7 708 aa12.07□□□□□ -0.48
SNX13-202ENST00000409604 DAW1Q8N136 415 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms