RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 SV2CQ496J9 727 aa11.1□□□□□ -0.63
TSPAN9-202ENST00000407263 RARS2Q5T160 578 aaKnown RBP11.1□□□□□ -0.63
TSPAN9-202ENST00000407263 ZNF280DQ6N043 979 aa11.1□□□□□ -0.63
TSPAN9-202ENST00000407263 ANKRD54Q6NXT1 300 aa11.1□□□□□ -0.63
TSPAN9-202ENST00000407263 RSPO2Q6UXX9 243 aaPredicted RBP11.1□□□□□ -0.63
TSPAN9-202ENST00000407263 SPATA31D4Q6ZUB0 917 aa11.1□□□□□ -0.63
TSPAN9-202ENST00000407263 NT5DC4Q86YG4 428 aa11.1□□□□□ -0.63
TSPAN9-202ENST00000407263 WDR49Q8IV35 697 aa11.1□□□□□ -0.63
TSPAN9-202ENST00000407263 C12orf76Q8N812 135 aaPredicted RBP11.1□□□□□ -0.63
TSPAN9-202ENST00000407263 LNX1Q8TBB1 728 aaPredicted RBP11.1□□□□□ -0.63
TSPAN9-202ENST00000407263 GPT2Q8TD30 523 aa11.1□□□□□ -0.63
TSPAN9-202ENST00000407263 SLC22A17Q8WUG5 538 aa11.1□□□□□ -0.63
TSPAN9-202ENST00000407263 CACTINQ8WUQ7 758 aaKnown RBP11.1□□□□□ -0.63
TSPAN9-202ENST00000407263 TSPAN18Q96SJ8 248 aa11.1□□□□□ -0.63
TSPAN9-202ENST00000407263 TSG101Q99816 390 aa11.1□□□□□ -0.63
TSPAN9-202ENST00000407263 GZF1Q9H116 711 aaPredicted RBP11.1□□□□□ -0.63
TSPAN9-202ENST00000407263 RXFP1Q9HBX9 757 aa11.1□□□□□ -0.63
TSPAN9-202ENST00000407263 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.1□□□□□ -0.63
TSPAN9-202ENST00000407263 INTS13Q9NVM9 706 aa11.1□□□□□ -0.63
TSPAN9-202ENST00000407263 MTRRQ9UBK8 725 aa11.1□□□□□ -0.63
TSPAN9-202ENST00000407263 PCDHB8Q9UN66 801 aa11.1□□□□□ -0.63
TSPAN9-202ENST00000407263 AGAP1Q9UPQ3 857 aa11.1□□□□□ -0.63
TSPAN9-202ENST00000407263 CDY1Q9Y6F8 540 aa11.1□□□□□ -0.63
TSPAN9-202ENST00000407263 DOCK8Q8NF50 2099 aa11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 GRXCR2A6NFK2 248 aa11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 PSMA7O14818 248 aa11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 SYN3O14994 580 aa11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 WEE2P0C1S8 567 aa11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 TRIM49P0CI25 452 aa11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 TRIM49CP0CI26 452 aa11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 ODC1P11926 461 aa11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 BMP6P22004 513 aa11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 AARSP49588 968 aaKnown RBP eCLIP11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 STX17P56962 302 aa11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 LILRA4P59901 499 aa11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 DLG4P78352 724 aa11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 YWHAHQ04917 246 aaPredicted RBP11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 BIRC3Q13489 604 aa11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 STIM1Q13586 685 aa11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 SURF1Q15526 300 aa11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 AAK1Q2M2I8 961 aa11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 CTXN3Q4LDR2 81 aa11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 PTCRAQ6ISU1 281 aaPredicted RBP11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 ANKS3Q6ZW76 656 aa11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 PPFIBP1Q86W92 1011 aa11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 SLC9A9Q8IVB4 645 aa11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 ELOA2Q8IYF1 753 aaPredicted RBP11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 FAM186BQ8IYM0 893 aa11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 ADSSL1Q8N142 457 aa11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 CSGALNACT2Q8N6G5 542 aa11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 ATXN2LQ8WWM7 1075 aaKnown RBP11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 MSLNLQ96KJ4 702 aa11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 SENP8Q96LD8 212 aa11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 NECAB3Q96P71 396 aaPredicted RBP11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 ASB2Q96Q27 587 aa11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 CLSTN3Q9BQT9 956 aa11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 DMAC2Q9NW81 257 aa11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 SIX4Q9UIU6 781 aa11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 ITGA11Q9UKX5 1188 aa11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 FRMD4BQ9Y2L6 1034 aa11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 NOTCH4Q99466 2003 aa11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 DENND4CQ5VZ89 1909 aa11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 PATJQ8NI35 1801 aa11.09□□□□□ -0.63
TSPAN9-202ENST00000407263 GREB1Q4ZG55 1949 aa11.08□□□□□ -0.64
TSPAN9-202ENST00000407263 M0QZQ0 153 aa11.08□□□□□ -0.64
TSPAN9-202ENST00000407263 MBTPS2O43462 519 aa11.08□□□□□ -0.64
TSPAN9-202ENST00000407263 TGM5O43548 720 aa11.08□□□□□ -0.64
TSPAN9-202ENST00000407263 AKAP3O75969 853 aa11.08□□□□□ -0.64
TSPAN9-202ENST00000407263 OR4Q2P0C623 313 aa11.08□□□□□ -0.64
TSPAN9-202ENST00000407263 CPB1P15086 417 aa11.08□□□□□ -0.64
TSPAN9-202ENST00000407263 SP100P23497 879 aaPredicted RBP11.08□□□□□ -0.64
TSPAN9-202ENST00000407263 OR1D2P34982 312 aa11.08□□□□□ -0.64
TSPAN9-202ENST00000407263 CDR1P51861 262 aa11.08□□□□□ -0.64
TSPAN9-202ENST00000407263 ROR1Q01973 937 aa11.08□□□□□ -0.64
TSPAN9-202ENST00000407263 ADAM9Q13443 819 aa11.08□□□□□ -0.64
TSPAN9-202ENST00000407263 SMAD4Q13485 552 aaKnown RBP11.08□□□□□ -0.64
TSPAN9-202ENST00000407263 NFIL3Q16649 462 aa11.08□□□□□ -0.64
TSPAN9-202ENST00000407263 EDRF1Q3B7T1 1238 aa11.08□□□□□ -0.64
TSPAN9-202ENST00000407263 COBLL1Q53SF7 1204 aa11.08□□□□□ -0.64
TSPAN9-202ENST00000407263 TJAP1Q5JTD0 557 aa11.08□□□□□ -0.64
TSPAN9-202ENST00000407263 ANKRD40Q6AI12 368 aa11.08□□□□□ -0.64
TSPAN9-202ENST00000407263 OVOS1Q6IE37 1185 aa11.08□□□□□ -0.64
TSPAN9-202ENST00000407263 PDXDC1Q6P996 788 aa11.08□□□□□ -0.64
TSPAN9-202ENST00000407263 SYCE2Q6PIF2 218 aa11.08□□□□□ -0.64
TSPAN9-202ENST00000407263 USP37Q86T82 979 aa11.08□□□□□ -0.64
TSPAN9-202ENST00000407263 SMRP1Q8NCR6 262 aa11.08□□□□□ -0.64
TSPAN9-202ENST00000407263 APPL2Q8NEU8 664 aa11.08□□□□□ -0.64
TSPAN9-202ENST00000407263 CXorf38Q8TB03 319 aa11.08□□□□□ -0.64
TSPAN9-202ENST00000407263 NELFBQ8WX92 580 aa11.08□□□□□ -0.64
TSPAN9-202ENST00000407263 ELMO3Q96BJ8 720 aa11.08□□□□□ -0.64
TSPAN9-202ENST00000407263 MFSD14AQ96MC6 490 aa11.08□□□□□ -0.64
TSPAN9-202ENST00000407263 SFXN1Q9H9B4 322 aa11.08□□□□□ -0.64
TSPAN9-202ENST00000407263 DZANK1Q9NVP4 752 aa11.08□□□□□ -0.64
TSPAN9-202ENST00000407263 KIAA1468Q9P260 1216 aa11.08□□□□□ -0.64
TSPAN9-202ENST00000407263 FNIP2Q9P278 1114 aa11.08□□□□□ -0.64
TSPAN9-202ENST00000407263 FBXW11Q9UKB1 542 aa11.08□□□□□ -0.64
TSPAN9-202ENST00000407263 R3HCC1Q9Y3T6 440 aaKnown RBP11.08□□□□□ -0.64
TSPAN9-202ENST00000407263 USP15Q9Y4E8 981 aaPredicted RBP11.08□□□□□ -0.64
TSPAN9-202ENST00000407263 XIRP2A4UGR9 3374 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms