RNA–Protein interactions for RNA: ENST00000406381.6

ERBB2-202, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene ERBB2, Length 4,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-202ENST00000406381 NFX1Q12986 1120 aaKnown RBP13.55□□□□□ -0.24
ERBB2-202ENST00000406381 ACCSLQ4AC99 568 aa13.55□□□□□ -0.24
ERBB2-202ENST00000406381 ACAD10Q6JQN1 1059 aa13.55□□□□□ -0.24
ERBB2-202ENST00000406381 PBXIP1Q96AQ6 731 aa13.55□□□□□ -0.24
ERBB2-202ENST00000406381 AGPAT3Q9NRZ7 376 aa13.55□□□□□ -0.24
ERBB2-202ENST00000406381 BFARQ9NZS9 450 aa13.55□□□□□ -0.24
ERBB2-202ENST00000406381 STX18Q9P2W9 335 aaKnown RBP13.55□□□□□ -0.24
ERBB2-202ENST00000406381 GRID1Q9ULK0 1009 aa13.55□□□□□ -0.24
ERBB2-202ENST00000406381 NEURL4Q96JN8 1562 aa13.55□□□□□ -0.24
ERBB2-202ENST00000406381 MYOM1P52179 1685 aa13.55□□□□□ -0.24
ERBB2-202ENST00000406381 PIK3R2O00459 728 aa13.55□□□□□ -0.24
ERBB2-202ENST00000406381 DDX3XO00571 662 aaKnown RBP eCLIP13.55□□□□□ -0.248e-8■■□□□ 13.1
ERBB2-202ENST00000406381 EPHB6O15197 1021 aa13.55□□□□□ -0.24
ERBB2-202ENST00000406381 GH2P01242 217 aa13.55□□□□□ -0.24
ERBB2-202ENST00000406381 SHBGP04278 402 aa13.55□□□□□ -0.24
ERBB2-202ENST00000406381 FAM200BP0CF97 657 aa13.55□□□□□ -0.24
ERBB2-202ENST00000406381 CASP7P55210 303 aa13.55□□□□□ -0.24
ERBB2-202ENST00000406381 OSTNP61366 133 aa13.55□□□□□ -0.24
ERBB2-202ENST00000406381 ITKQ08881 620 aa13.55□□□□□ -0.24
ERBB2-202ENST00000406381 PIGHQ14442 188 aaPredicted RBP13.55□□□□□ -0.24
ERBB2-202ENST00000406381 SNRNP35Q16560 246 aaKnown RBP13.55□□□□□ -0.24
ERBB2-202ENST00000406381 MED10Q9BTT4 135 aa13.55□□□□□ -0.24
ERBB2-202ENST00000406381 ASCC2Q9H1I8 757 aaPredicted RBP13.55□□□□□ -0.24
ERBB2-202ENST00000406381 SYCE1LA8MT33 242 aa13.55□□□□□ -0.24
ERBB2-202ENST00000406381 RSPH10B2B2RC85 870 aa13.55□□□□□ -0.24
ERBB2-202ENST00000406381 XPO1O14980 1071 aaKnown RBP13.55□□□□□ -0.24
ERBB2-202ENST00000406381 GSTA4O15217 222 aa13.55□□□□□ -0.24
ERBB2-202ENST00000406381 ESRRBO95718 433 aa13.55□□□□□ -0.24
ERBB2-202ENST00000406381 RSPH10BP0C881 870 aa13.55□□□□□ -0.24
ERBB2-202ENST00000406381 AUHQ13825 339 aaKnown RBP13.55□□□□□ -0.24
ERBB2-202ENST00000406381 TTC39BQ5VTQ0 682 aaPredicted RBP13.55□□□□□ -0.24
ERBB2-202ENST00000406381 LRRC6Q86X45 466 aa13.55□□□□□ -0.24
ERBB2-202ENST00000406381 OSBPL7Q9BZF2 842 aa13.55□□□□□ -0.24
ERBB2-202ENST00000406381 SEC24DO94855 1032 aaPredicted RBP13.54□□□□□ -0.24
ERBB2-202ENST00000406381 RBP3P10745 1247 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 ATP6V1C1P21283 382 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 PTDSS1P48651 473 aaKnown RBP13.54□□□□□ -0.24
ERBB2-202ENST00000406381 DRG2P55039 364 aaKnown RBP13.54□□□□□ -0.24
ERBB2-202ENST00000406381 LRRC8EQ6NSJ5 796 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 CDKL3Q8IVW4 592 aaPredicted RBP13.54□□□□□ -0.24
ERBB2-202ENST00000406381 SCFD2Q8WU76 684 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 CATSPER2Q96P56 530 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 TMEM120AQ9BXJ8 343 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 ZNF212Q9UDV6 495 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 SUN2Q9UH99 717 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 ARHGAP26Q9UNA1 814 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 COL15A1P39059 1388 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 DNM1LO00429 736 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 SSTR3P32745 418 aaPredicted RBP13.54□□□□□ -0.24
ERBB2-202ENST00000406381 ZNF699Q32M78 642 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 C1orf228Q6PIY5 440 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 KLHL4Q9C0H6 718 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 CAAP1Q9H8G2 361 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 PKD2L2Q9NZM6 624 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 KLHL8Q9P2G9 620 aaPredicted RBP13.54□□□□□ -0.24
ERBB2-202ENST00000406381 TSC22D4Q9Y3Q8 395 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 MYO3BQ8WXR4 1341 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 TCRBV5S4A2TA0A5A2 114 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 LIN7AO14910 233 aaPredicted RBP13.54□□□□□ -0.24
ERBB2-202ENST00000406381 CST8O60676 142 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 SDC4P31431 198 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 KRT76Q01546 638 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 RNF43Q68DV7 783 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 IRF2BP1Q8IU81 584 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 ZNF34Q8IZ26 560 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 GIPC2Q8TF65 315 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 CLMNQ96JQ2 1002 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 TBC1D10AQ9BXI6 508 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 TAGLN3Q9UI15 199 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 TM9SF1O15321 606 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 KLRC4O43908 158 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 FLOT2Q14254 428 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 TRADDQ15628 312 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 CCNG2Q16589 344 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 SYCP2LQ5T4T6 812 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 LARGE2Q8N3Y3 721 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 PIK3R5Q8WYR1 880 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 BAP1Q92560 729 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 TRAPPC9Q96Q05 1148 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 CCDC90BQ9GZT6 254 aa13.54□□□□□ -0.24
ERBB2-202ENST00000406381 PFDN6O15212 129 aa13.53□□□□□ -0.24
ERBB2-202ENST00000406381 NCALDP61601 193 aa13.53□□□□□ -0.24
ERBB2-202ENST00000406381 ZNF677Q86XU0 584 aa13.53□□□□□ -0.24
ERBB2-202ENST00000406381 ZC3H15Q8WU90 426 aaKnown RBP13.53□□□□□ -0.24
ERBB2-202ENST00000406381 JADE3Q92613 823 aa13.53□□□□□ -0.24
ERBB2-202ENST00000406381 CNBD2Q96M20 576 aa13.53□□□□□ -0.24
ERBB2-202ENST00000406381 FLT1P17948 1338 aa13.53□□□□□ -0.24
ERBB2-202ENST00000406381 H0YIN7 160 aa13.53□□□□□ -0.24
ERBB2-202ENST00000406381 KCNN4O15554 427 aa13.53□□□□□ -0.24
ERBB2-202ENST00000406381 RASSF9O75901 435 aa13.53□□□□□ -0.24
ERBB2-202ENST00000406381 MMP13P45452 471 aa13.53□□□□□ -0.24
ERBB2-202ENST00000406381 PSMC5P62195 406 aa13.53□□□□□ -0.24
ERBB2-202ENST00000406381 SLC45A4Q5BKX6 768 aa13.53□□□□□ -0.24
ERBB2-202ENST00000406381 SETD3Q86TU7 594 aaPredicted RBP13.53□□□□□ -0.24
ERBB2-202ENST00000406381 DHX38Q92620 1227 aaKnown RBP13.53□□□□□ -0.24
ERBB2-202ENST00000406381 POLR3CQ9BUI4 534 aaPredicted RBP13.53□□□□□ -0.24
ERBB2-202ENST00000406381 RBAKQ9NYW8 714 aaPredicted RBP13.53□□□□□ -0.24
ERBB2-202ENST00000406381 PNMA3Q9UL41 463 aa13.53□□□□□ -0.24
ERBB2-202ENST00000406381 CDY2AQ9Y6F7 541 aa13.53□□□□□ -0.24
ERBB2-202ENST00000406381 CDY1Q9Y6F8 540 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms