RNA–Protein interactions for RNA: ENST00000404989.1

PARVB-203, Transcript of parvin beta, humanhuman

TSL 1 (best) BASIC

Gene PARVB, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-203ENST00000404989 UBL4BQ8N7F7 174 aa17.34■□□□□ 0.37
PARVB-203ENST00000404989 USP38Q8NB14 1042 aa17.34■□□□□ 0.37
PARVB-203ENST00000404989 ZNF606Q8WXB4 792 aa17.34■□□□□ 0.37
PARVB-203ENST00000404989 VCPIP1Q96JH7 1222 aa17.34■□□□□ 0.37
PARVB-203ENST00000404989 NAP1L3Q99457 506 aaPredicted RBP17.34■□□□□ 0.37
PARVB-203ENST00000404989 LRRC1Q9BTT6 524 aa17.34■□□□□ 0.37
PARVB-203ENST00000404989 BCO2Q9BYV7 579 aa17.34■□□□□ 0.37
PARVB-203ENST00000404989 SDCBP2Q9H190 292 aa17.34■□□□□ 0.37
PARVB-203ENST00000404989 UPF3AQ9H1J1 476 aaKnown RBP17.34■□□□□ 0.37
PARVB-203ENST00000404989 CXCL16Q9H2A7 254 aa17.34■□□□□ 0.37
PARVB-203ENST00000404989 CNOT8Q9UFF9 292 aaKnown RBP17.34■□□□□ 0.37
PARVB-203ENST00000404989 TTC7AQ9ULT0 858 aaPredicted RBP17.34■□□□□ 0.37
PARVB-203ENST00000404989 CCDC188H7C350 402 aa17.33■□□□□ 0.37
PARVB-203ENST00000404989 PGRMC1O00264 195 aaKnown RBP17.33■□□□□ 0.37
PARVB-203ENST00000404989 THAP12O43422 761 aa17.33■□□□□ 0.37
PARVB-203ENST00000404989 CEP104O60308 925 aa17.33■□□□□ 0.37
PARVB-203ENST00000404989 ALDH1A1P00352 501 aa17.33■□□□□ 0.37
PARVB-203ENST00000404989 CD58P19256 250 aa17.33■□□□□ 0.37
PARVB-203ENST00000404989 ATICP31939 592 aa17.33■□□□□ 0.37
PARVB-203ENST00000404989 SSTR3P32745 418 aaPredicted RBP17.33■□□□□ 0.37
PARVB-203ENST00000404989 FLT3LGP49771 235 aa17.33■□□□□ 0.37
PARVB-203ENST00000404989 RNASE9P60153 205 aaKnown RBP17.33■□□□□ 0.37
PARVB-203ENST00000404989 TRIM32Q13049 653 aa17.33■□□□□ 0.37
PARVB-203ENST00000404989 LONRF2Q1L5Z9 754 aa17.33■□□□□ 0.37
PARVB-203ENST00000404989 LIN9Q5TKA1 542 aa17.33■□□□□ 0.37
PARVB-203ENST00000404989 DCAF12L1Q5VU92 463 aa17.33■□□□□ 0.37
PARVB-203ENST00000404989 MFSD14CQ5VZR4 134 aa17.33■□□□□ 0.37
PARVB-203ENST00000404989 MON1BQ7L1V2 547 aa17.33■□□□□ 0.37
PARVB-203ENST00000404989 CATSPER4Q7RTX7 472 aa17.33■□□□□ 0.37
PARVB-203ENST00000404989 ZNF564Q8TBZ8 553 aaPredicted RBP17.33■□□□□ 0.37
PARVB-203ENST00000404989 TMEM40Q8WWA1 233 aa17.33■□□□□ 0.37
PARVB-203ENST00000404989 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.33■□□□□ 0.37
PARVB-203ENST00000404989 EIF2AQ9BY44 585 aaKnown RBP17.33■□□□□ 0.37
PARVB-203ENST00000404989 CARD9Q9H257 536 aa17.33■□□□□ 0.37
PARVB-203ENST00000404989 VRTNQ9H8Y1 702 aa17.33■□□□□ 0.37
PARVB-203ENST00000404989 GINS2Q9Y248 185 aa17.33■□□□□ 0.37
PARVB-203ENST00000404989 AOC2O75106 756 aa17.32■□□□□ 0.36
PARVB-203ENST00000404989 ITGB3P05106 788 aa17.32■□□□□ 0.36
PARVB-203ENST00000404989 KRT19P08727 400 aa17.32■□□□□ 0.36
PARVB-203ENST00000404989 GNAT1P11488 350 aa17.32■□□□□ 0.36
PARVB-203ENST00000404989 EIF4BP23588 611 aaKnown RBP17.32■□□□□ 0.36
PARVB-203ENST00000404989 NSFP46459 744 aaKnown RBP17.32■□□□□ 0.36
PARVB-203ENST00000404989 GUCY2FP51841 1108 aa17.32■□□□□ 0.36
PARVB-203ENST00000404989 NKX3-2P78367 333 aa17.32■□□□□ 0.36
PARVB-203ENST00000404989 PTP4A2Q12974 167 aa17.32■□□□□ 0.36
PARVB-203ENST00000404989 TMEM132DQ14C87 1099 aa17.32■□□□□ 0.36
PARVB-203ENST00000404989 SNX17Q15036 470 aa17.32■□□□□ 0.36
PARVB-203ENST00000404989 PPP2R5EQ16537 467 aa17.32■□□□□ 0.36
PARVB-203ENST00000404989 BEND6Q5SZJ8 279 aaPredicted RBP17.32■□□□□ 0.36
PARVB-203ENST00000404989 C8orf74Q6P047 294 aa17.32■□□□□ 0.36
PARVB-203ENST00000404989 SLC27A1Q6PCB7 646 aa17.32■□□□□ 0.36
PARVB-203ENST00000404989 SCARA5Q6ZMJ2 495 aa17.32■□□□□ 0.36
PARVB-203ENST00000404989 PAXIP1Q6ZW49 1069 aaPredicted RBP17.32■□□□□ 0.36
PARVB-203ENST00000404989 HDXQ7Z353 690 aa17.32■□□□□ 0.36
PARVB-203ENST00000404989 CPNE8Q86YQ8 564 aa17.32■□□□□ 0.36
PARVB-203ENST00000404989 HDAC7Q8WUI4 952 aa17.32■□□□□ 0.36
PARVB-203ENST00000404989 BTBD6Q96KE9 485 aa17.32■□□□□ 0.36
PARVB-203ENST00000404989 WNT8AQ9H1J5 351 aa17.32■□□□□ 0.36
PARVB-203ENST00000404989 FAM124BQ9H5Z6 455 aaPredicted RBP17.32■□□□□ 0.36
PARVB-203ENST00000404989 C2CD2Q9Y426 696 aa17.32■□□□□ 0.36
PARVB-203ENST00000404989 SCN10AQ9Y5Y9 1956 aa17.32■□□□□ 0.36
PARVB-203ENST00000404989 TMEM110-MUSTN1A8MSY1 372 aa17.32■□□□□ 0.36
PARVB-203ENST00000404989 C6orf222P0C671 652 aaPredicted RBP17.32■□□□□ 0.36
PARVB-203ENST00000404989 P4HA1P13674 534 aa17.32■□□□□ 0.36
PARVB-203ENST00000404989 COMTP21964 271 aa17.32■□□□□ 0.36
PARVB-203ENST00000404989 AXLP30530 894 aa17.32■□□□□ 0.36
PARVB-203ENST00000404989 PRKCZQ05513 592 aa17.32■□□□□ 0.36
PARVB-203ENST00000404989 MESDQ14696 234 aa17.32■□□□□ 0.36
PARVB-203ENST00000404989 ZNF667Q5HYK9 610 aa17.32■□□□□ 0.36
PARVB-203ENST00000404989 PHF13Q86YI8 300 aaPredicted RBP17.32■□□□□ 0.36
PARVB-203ENST00000404989 PASD1Q8IV76 773 aa17.32■□□□□ 0.36
PARVB-203ENST00000404989 KRT222Q8N1A0 295 aa17.32■□□□□ 0.36
PARVB-203ENST00000404989 TFAP2BQ92481 460 aa17.32■□□□□ 0.36
PARVB-203ENST00000404989 CD101Q93033 1021 aa17.32■□□□□ 0.36
PARVB-203ENST00000404989 SNTG2Q9NY99 539 aa17.32■□□□□ 0.36
PARVB-203ENST00000404989 NXF1Q9UBU9 619 aaKnown RBP17.32■□□□□ 0.36
PARVB-203ENST00000404989 DMGDHQ9UI17 866 aaKnown RBP17.32■□□□□ 0.36
PARVB-203ENST00000404989 RRM1P23921 792 aa17.31■□□□□ 0.36
PARVB-203ENST00000404989 BRD2P25440 801 aaKnown RBP17.31■□□□□ 0.36
PARVB-203ENST00000404989 RAP1GAPP47736 663 aa17.31■□□□□ 0.36
PARVB-203ENST00000404989 PEX5P50542 639 aa17.31■□□□□ 0.36
PARVB-203ENST00000404989 CDH8P55286 799 aa17.31■□□□□ 0.36
PARVB-203ENST00000404989 MRPS25P82663 173 aaKnown RBP17.31■□□□□ 0.36
PARVB-203ENST00000404989 LLGL2Q6P1M3 1020 aa17.31■□□□□ 0.36
PARVB-203ENST00000404989 NOTUMQ6P988 496 aa17.31■□□□□ 0.36
PARVB-203ENST00000404989 NME8Q8N427 588 aa17.31■□□□□ 0.36
PARVB-203ENST00000404989 TTC39CQ8N584 583 aa17.31■□□□□ 0.36
PARVB-203ENST00000404989 WHAMMQ8TF30 809 aa17.31■□□□□ 0.36
PARVB-203ENST00000404989 ALG3Q92685 438 aa17.31■□□□□ 0.36
PARVB-203ENST00000404989 KRT35Q92764 455 aa17.31■□□□□ 0.36
PARVB-203ENST00000404989 MTG1Q9BT17 334 aaPredicted RBP17.31■□□□□ 0.36
PARVB-203ENST00000404989 PLEKHA5Q9HAU0 1116 aa17.31■□□□□ 0.36
PARVB-203ENST00000404989 DPP3Q9NY33 737 aa17.31■□□□□ 0.36
PARVB-203ENST00000404989 LCMT1Q9UIC8 334 aa17.31■□□□□ 0.36
PARVB-203ENST00000404989 DERAQ9Y315 318 aa17.31■□□□□ 0.36
PARVB-203ENST00000404989 PDCD11Q14690 1871 aaKnown RBP17.31■□□□□ 0.36
PARVB-203ENST00000404989 ZMYND10O75800 440 aa17.3■□□□□ 0.36
PARVB-203ENST00000404989 SASH3O75995 380 aa17.3■□□□□ 0.36
PARVB-203ENST00000404989 LSM8O95777 96 aaKnown RBP17.3■□□□□ 0.36
PARVB-203ENST00000404989 STAU1O95793 577 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms