RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 NOVA1P51513 510 aaKnown RBP19.79■□□□□ 0.76
UFD1-202ENST00000399523 ARHGAP29Q52LW3 1261 aa19.79■□□□□ 0.76
UFD1-202ENST00000399523 ATF7IP2Q5U623 682 aa19.79■□□□□ 0.76
UFD1-202ENST00000399523 TMC8Q8IU68 726 aa19.79■□□□□ 0.76
UFD1-202ENST00000399523 ARID3BQ8IVW6 561 aaPredicted RBP19.79■□□□□ 0.76
UFD1-202ENST00000399523 DEPTORQ8TB45 409 aa19.79■□□□□ 0.76
UFD1-202ENST00000399523 A0A1W2PRU2 124 aa19.78■□□□□ 0.76
UFD1-202ENST00000399523 FAM205CA6NFA0 338 aa19.78■□□□□ 0.76
UFD1-202ENST00000399523 GIPC1O14908 333 aa19.78■□□□□ 0.76
UFD1-202ENST00000399523 CCDC192P0DO97 292 aa19.78■□□□□ 0.76
UFD1-202ENST00000399523 XBP1P17861 261 aa19.78■□□□□ 0.76
UFD1-202ENST00000399523 RPL9P32969 192 aaKnown RBP19.78■□□□□ 0.76
UFD1-202ENST00000399523 PXNP49023 591 aaPredicted RBP19.78■□□□□ 0.76
UFD1-202ENST00000399523 EFNA5P52803 228 aa19.78■□□□□ 0.76
UFD1-202ENST00000399523 CALCRLQ16602 461 aa19.78■□□□□ 0.76
UFD1-202ENST00000399523 ZNF280DQ6N043 979 aa19.78■□□□□ 0.76
UFD1-202ENST00000399523 PKN3Q6P5Z2 889 aa19.78■□□□□ 0.76
UFD1-202ENST00000399523 RNF19BQ6ZMZ0 732 aa19.78■□□□□ 0.76
UFD1-202ENST00000399523 RUFY3Q7L099 469 aa19.78■□□□□ 0.76
UFD1-202ENST00000399523 APBB1IPQ7Z5R6 666 aaPredicted RBP19.78■□□□□ 0.76
UFD1-202ENST00000399523 BEST2Q8NFU1 509 aa19.78■□□□□ 0.76
UFD1-202ENST00000399523 TTC8Q8TAM2 541 aa19.78■□□□□ 0.76
UFD1-202ENST00000399523 SUSD3Q96L08 255 aa19.78■□□□□ 0.76
UFD1-202ENST00000399523 ZMAT2Q96NC0 199 aaKnown RBP19.78■□□□□ 0.76
UFD1-202ENST00000399523 TOPORSQ9NS56 1045 aaPredicted RBP19.78■□□□□ 0.76
UFD1-202ENST00000399523 GJB4Q9NTQ9 266 aa19.78■□□□□ 0.76
UFD1-202ENST00000399523 OBP2AQ9NY56 170 aa19.78■□□□□ 0.76
UFD1-202ENST00000399523 KIF26AQ9ULI4 1882 aaPredicted RBP19.77■□□□□ 0.76
UFD1-202ENST00000399523 KCNE1P15382 129 aa19.77■□□□□ 0.76
UFD1-202ENST00000399523 CYP11B2P19099 503 aa19.77■□□□□ 0.76
UFD1-202ENST00000399523 GRM5P41594 1212 aa19.77■□□□□ 0.76
UFD1-202ENST00000399523 YARSP54577 528 aaKnown RBP19.77■□□□□ 0.76
UFD1-202ENST00000399523 PPP2R5AQ15172 486 aa19.77■□□□□ 0.76
UFD1-202ENST00000399523 PLK5Q496M5 336 aa19.77■□□□□ 0.76
UFD1-202ENST00000399523 TCEAL6Q6IPX3 200 aa19.77■□□□□ 0.76
UFD1-202ENST00000399523 HAUS6Q7Z4H7 955 aa19.77■□□□□ 0.76
UFD1-202ENST00000399523 APPL2Q8NEU8 664 aa19.77■□□□□ 0.76
UFD1-202ENST00000399523 TCEAL3Q969E4 200 aa19.77■□□□□ 0.76
UFD1-202ENST00000399523 ZFYVE19Q96K21 471 aa19.77■□□□□ 0.76
UFD1-202ENST00000399523 MKNK1Q9BUB5 465 aa19.77■□□□□ 0.76
UFD1-202ENST00000399523 ADAM33Q9BZ11 813 aa19.77■□□□□ 0.76
UFD1-202ENST00000399523 ZSWIM6Q9HCJ5 1215 aa19.77■□□□□ 0.76
UFD1-202ENST00000399523 TNFSF13BQ9Y275 285 aa19.77■□□□□ 0.76
UFD1-202ENST00000399523 YIPF1Q9Y548 306 aa19.77■□□□□ 0.76
UFD1-202ENST00000399523 NUB1Q9Y5A7 615 aa19.77■□□□□ 0.76
UFD1-202ENST00000399523 NBEAQ8NFP9 2946 aa19.77■□□□□ 0.76
UFD1-202ENST00000399523 CITO14578 2027 aa19.76■□□□□ 0.75
UFD1-202ENST00000399523 NUP210Q8TEM1 1887 aaPredicted RBP19.76■□□□□ 0.75
UFD1-202ENST00000399523 SRRM3A6NNA2 597 aaPredicted RBP19.76■□□□□ 0.75
UFD1-202ENST00000399523 TXKP42681 527 aa19.76■□□□□ 0.75
UFD1-202ENST00000399523 ZNF252P-AS1Q0IIN9 211 aa19.76■□□□□ 0.75
UFD1-202ENST00000399523 FOXC1Q12948 553 aa19.76■□□□□ 0.75
UFD1-202ENST00000399523 STK3Q13188 491 aa19.76■□□□□ 0.75
UFD1-202ENST00000399523 STXBP5Q5T5C0 1151 aa19.76■□□□□ 0.75
UFD1-202ENST00000399523 CATSPER3Q86XQ3 398 aa19.76■□□□□ 0.75
UFD1-202ENST00000399523 GPIHBP1Q8IV16 184 aa19.76■□□□□ 0.75
UFD1-202ENST00000399523 CEP120Q8N960 986 aa19.76■□□□□ 0.75
UFD1-202ENST00000399523 DDX12PQ92771 950 aa19.76■□□□□ 0.75
UFD1-202ENST00000399523 GATA6Q92908 595 aa19.76■□□□□ 0.75
UFD1-202ENST00000399523 TNFRSF25Q93038 417 aa19.76■□□□□ 0.75
UFD1-202ENST00000399523 MTMR9Q96QG7 549 aa19.76■□□□□ 0.75
UFD1-202ENST00000399523 NACC1Q96RE7 527 aa19.76■□□□□ 0.75
UFD1-202ENST00000399523 LARP6Q9BRS8 491 aaKnown RBP19.76■□□□□ 0.75
UFD1-202ENST00000399523 EDEM2Q9BV94 578 aa19.76■□□□□ 0.75
UFD1-202ENST00000399523 CCDC94Q9BW85 323 aaPredicted RBP19.76■□□□□ 0.75
UFD1-202ENST00000399523 DNAJC25Q9H1X3 360 aa19.76■□□□□ 0.75
UFD1-202ENST00000399523 TUFT1Q9NNX1 390 aa19.76■□□□□ 0.75
UFD1-202ENST00000399523 PCNX2A6NKB5 2137 aa19.75■□□□□ 0.75
UFD1-202ENST00000399523 C4orf47A7E2U8 309 aa19.75■□□□□ 0.75
UFD1-202ENST00000399523 ATG13O75143 517 aa19.75■□□□□ 0.75
UFD1-202ENST00000399523 VNN2O95498 520 aa19.75■□□□□ 0.75
UFD1-202ENST00000399523 CPB1P15086 417 aa19.75■□□□□ 0.75
UFD1-202ENST00000399523 PLCB2Q00722 1185 aa19.75■□□□□ 0.75
UFD1-202ENST00000399523 CACNB1Q02641 598 aaPredicted RBP19.75■□□□□ 0.75
UFD1-202ENST00000399523 PLD1Q13393 1074 aa19.75■□□□□ 0.75
UFD1-202ENST00000399523 PADI6Q6TGC4 694 aa19.75■□□□□ 0.75
UFD1-202ENST00000399523 LRSAM1Q6UWE0 723 aa19.75■□□□□ 0.75
UFD1-202ENST00000399523 CAMKK1Q8N5S9 505 aa19.75■□□□□ 0.75
UFD1-202ENST00000399523 TMEM209Q96SK2 561 aa19.75■□□□□ 0.75
UFD1-202ENST00000399523 KIFC3Q9BVG8 833 aa19.75■□□□□ 0.75
UFD1-202ENST00000399523 PTPRHQ9HD43 1115 aa19.75■□□□□ 0.75
UFD1-202ENST00000399523 SLC8A2Q9UPR5 921 aa19.75■□□□□ 0.75
UFD1-202ENST00000399523 STK36Q9NRP7 1315 aa19.75■□□□□ 0.75
UFD1-202ENST00000399523 NUP205Q92621 2012 aa19.75■□□□□ 0.75
UFD1-202ENST00000399523 ASCC3Q8N3C0 2202 aaKnown RBP19.74■□□□□ 0.75
UFD1-202ENST00000399523 SOBPA7XYQ1 873 aa19.74■□□□□ 0.75
UFD1-202ENST00000399523 DPYSL4O14531 572 aa19.74■□□□□ 0.75
UFD1-202ENST00000399523 CDKL5O76039 1030 aa19.74■□□□□ 0.75
UFD1-202ENST00000399523 SPINK2P20155 84 aa19.74■□□□□ 0.75
UFD1-202ENST00000399523 WEE1P30291 646 aa19.74■□□□□ 0.75
UFD1-202ENST00000399523 TNK2Q07912 1038 aa19.74■□□□□ 0.75
UFD1-202ENST00000399523 NR5A1Q13285 461 aa19.74■□□□□ 0.75
UFD1-202ENST00000399523 ITPRIPL2Q3MIP1 535 aa19.74■□□□□ 0.75
UFD1-202ENST00000399523 DAB2IPQ5VWQ8 1189 aa19.74■□□□□ 0.75
UFD1-202ENST00000399523 GAREM2Q75VX8 874 aa19.74■□□□□ 0.75
UFD1-202ENST00000399523 SKAP1Q86WV1 359 aa19.74■□□□□ 0.75
UFD1-202ENST00000399523 ABCA7Q8IZY2 2146 aa19.74■□□□□ 0.75
UFD1-202ENST00000399523 TBC1D32Q96NH3 1257 aa19.74■□□□□ 0.75
UFD1-202ENST00000399523 DUSP15Q9H1R2 295 aaPredicted RBP19.74■□□□□ 0.75
UFD1-202ENST00000399523 CDT1Q9H211 546 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms