RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 RMDN2Q96LZ7 410 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 EYA3Q99504 573 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 NACA2Q9H009 215 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 NAT10Q9H0A0 1025 aaKnown RBP6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 NCOR1P1Q9H4R4 102 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 SEPT10Q9P0V9 454 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 MAN1B1Q9UKM7 699 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 NUP98P52948 1817 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 BACH1O14867 736 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 ZPR1O75312 459 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 IMPDH2P12268 514 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 CD44P16070 742 aaKnown RBP6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 PORP16435 677 aaPredicted RBP6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 TAL1P17542 331 aaPredicted RBP6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 GAP43P17677 238 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 PEX2P28328 305 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 TKTL1P51854 596 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 RPS8P62241 208 aaKnown RBP6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 ZYXQ15942 572 aaKnown RBP6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 ERCC6LQ2NKX8 1250 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 FAM209BQ5JX69 171 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 SH3PXD2AQ5TCZ1 1133 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 TPGS2Q68CL5 300 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 PPFIBP1Q86W92 1011 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 LURAP1LQ8IV03 231 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 SH3RF3Q8TEJ3 882 aaPredicted RBP6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 CREB3L4Q8TEY5 395 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 ZDHHC15Q96MV8 337 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 ZSCAN10Q96SZ4 725 aaPredicted RBP6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 YME1L1Q96TA2 773 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 RIOK1Q9BRS2 568 aaKnown RBP6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 CRACR2AQ9BSW2 395 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 OR10A4Q9H209 315 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 TMEM60Q9H2L4 133 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 SEMA4AQ9H3S1 761 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 HAUS2Q9NVX0 235 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 CHORDC1Q9UHD1 332 aaPredicted RBP6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 COL24A1Q17RW2 1714 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 ARPC4-TTLL3A0A0A6YYG9 625 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 A0A1W2PQ27 194 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 A0A1W2PQ64 194 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 A0A1W2PQD8 194 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 MAN1A2O60476 641 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 PALMO75781 387 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 PGM3O95394 542 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 AKAP5P24588 427 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 SLC26A5P58743 744 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 PPP1R7Q15435 360 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 VHLLQ6RSH7 139 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 PLEKHM3Q6ZWE6 761 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 DEFB132Q7Z7B7 95 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 AGBL5Q8NDL9 886 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 ESR2Q92731 530 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 PPP1R13BQ96KQ4 1090 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 VCPKMTQ9H867 229 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 LZTFL1Q9NQ48 299 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 CCDC177Q9NQR7 707 aaPredicted RBP6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 C14orf119Q9NWQ9 140 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 PPM1HQ9ULR3 514 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 BARX2Q9UMQ3 279 aaPredicted RBP6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 CSPG5O95196 566 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 IFNAR1P17181 557 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 CAPN2P17655 700 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 TFAP4Q01664 338 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 MPP2Q14168 576 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 FAM110CQ1W6H9 321 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 CEP55Q53EZ4 464 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 RESP18Q5W5W9 173 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 LILRA6Q6PI73 481 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 REC114Q7Z4M0 266 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 HEATR3Q7Z4Q2 680 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 TREML1Q86YW5 311 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 SCUBE1Q8IWY4 988 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 KIAA0319LQ8IZA0 1049 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 TOR1AIP2Q8NFQ8 470 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 DIO2Q92813 273 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 ATP2A3Q93084 1043 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 BICD1Q96G01 975 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 GAS2L1Q99501 681 aaPredicted RBP6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 ACAT2Q9BWD1 397 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 EDEM3Q9BZQ6 932 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 KRT23Q9C075 422 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 DACH1Q9UI36 760 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 PCDHB10Q9UN67 800 aa6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.66□□□□□ -1.34
TRAPPC13-202ENST00000399438 LRRC14BA6NHZ5 514 aa6.65□□□□□ -1.34
TRAPPC13-202ENST00000399438 FAM227AF5H4B4 570 aa6.65□□□□□ -1.34
TRAPPC13-202ENST00000399438 UBXN8O00124 270 aa6.65□□□□□ -1.34
TRAPPC13-202ENST00000399438 IRAK2O43187 625 aa6.65□□□□□ -1.34
TRAPPC13-202ENST00000399438 FMO6PO60774 539 aa6.65□□□□□ -1.34
TRAPPC13-202ENST00000399438 SOD2P04179 222 aa6.65□□□□□ -1.34
TRAPPC13-202ENST00000399438 TOP1P11387 765 aaKnown RBP6.65□□□□□ -1.34
TRAPPC13-202ENST00000399438 TMEM11P17152 192 aa6.65□□□□□ -1.34
TRAPPC13-202ENST00000399438 MAPK4P31152 587 aa6.65□□□□□ -1.34
TRAPPC13-202ENST00000399438 HIBADHP31937 336 aaKnown RBP6.65□□□□□ -1.34
TRAPPC13-202ENST00000399438 ATP5OP48047 213 aa6.65□□□□□ -1.34
TRAPPC13-202ENST00000399438 PLCD1P51178 756 aa6.65□□□□□ -1.34
TRAPPC13-202ENST00000399438 MYL5Q02045 173 aa6.65□□□□□ -1.34
TRAPPC13-202ENST00000399438 ZBTB17Q13105 803 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms