RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 AFG1LQ8WV93 481 aa14.97□□□□□ -0.01
PCDHGA11-201ENST00000398587 ZIM3Q96PE6 472 aa14.97□□□□□ -0.01
PCDHGA11-201ENST00000398587 PACSIN1Q9BY11 444 aa14.97□□□□□ -0.01
PCDHGA11-201ENST00000398587 TRABDQ9H4I3 376 aa14.97□□□□□ -0.01
PCDHGA11-201ENST00000398587 FAM49BQ9NUQ9 324 aa14.97□□□□□ -0.01
PCDHGA11-201ENST00000398587 SMG5Q9UPR3 1016 aaKnown RBP14.97□□□□□ -0.01
PCDHGA11-201ENST00000398587 KNDC1Q76NI1 1749 aa14.97□□□□□ -0.01
PCDHGA11-201ENST00000398587 VWA5AO00534 786 aa14.97□□□□□ -0.01
PCDHGA11-201ENST00000398587 CHEK2O96017 543 aa14.97□□□□□ -0.01
PCDHGA11-201ENST00000398587 APRTP07741 180 aa14.97□□□□□ -0.01
PCDHGA11-201ENST00000398587 FGRP09769 529 aa14.97□□□□□ -0.01
PCDHGA11-201ENST00000398587 TGFB3P10600 412 aa14.97□□□□□ -0.01
PCDHGA11-201ENST00000398587 H2AFXP16104 143 aaPredicted RBP14.97□□□□□ -0.01
PCDHGA11-201ENST00000398587 NFKBIAP25963 317 aa14.97□□□□□ -0.01
PCDHGA11-201ENST00000398587 SULT1E1P49888 294 aa14.97□□□□□ -0.01
PCDHGA11-201ENST00000398587 ART3Q13508 389 aa14.97□□□□□ -0.01
PCDHGA11-201ENST00000398587 TRIM67Q6ZTA4 783 aa14.97□□□□□ -0.01
PCDHGA11-201ENST00000398587 NDUFAF2Q8N183 169 aa14.97□□□□□ -0.01
PCDHGA11-201ENST00000398587 C1orf131Q8NDD1 294 aaKnown RBP14.97□□□□□ -0.01
PCDHGA11-201ENST00000398587 SERPINI1Q99574 410 aa14.97□□□□□ -0.01
PCDHGA11-201ENST00000398587 EFHD1Q9BUP0 239 aa14.97□□□□□ -0.01
PCDHGA11-201ENST00000398587 ZFYVE28Q9HCC9 887 aa14.97□□□□□ -0.01
PCDHGA11-201ENST00000398587 CHORDC1Q9UHD1 332 aaPredicted RBP14.97□□□□□ -0.01
PCDHGA11-201ENST00000398587 SLC8A2Q9UPR5 921 aa14.97□□□□□ -0.01
PCDHGA11-201ENST00000398587 FRMPD4Q14CM0 1322 aa14.97□□□□□ -0.01
PCDHGA11-201ENST00000398587 RPS6KA5O75582 802 aa14.97□□□□□ -0.01
PCDHGA11-201ENST00000398587 CTSHP09668 335 aa14.97□□□□□ -0.01
PCDHGA11-201ENST00000398587 SV2AQ7L0J3 742 aa14.97□□□□□ -0.01
PCDHGA11-201ENST00000398587 ANKMY2Q8IV38 441 aa14.97□□□□□ -0.01
PCDHGA11-201ENST00000398587 NUDCD3Q8IVD9 361 aa14.97□□□□□ -0.01
PCDHGA11-201ENST00000398587 IFT43Q96FT9 208 aa14.97□□□□□ -0.01
PCDHGA11-201ENST00000398587 PNKPQ96T60 521 aa14.97□□□□□ -0.01
PCDHGA11-201ENST00000398587 CGRRF1Q99675 332 aa14.97□□□□□ -0.01
PCDHGA11-201ENST00000398587 ROPN1BQ9BZX4 212 aaPredicted RBP14.97□□□□□ -0.01
PCDHGA11-201ENST00000398587 ROPN1Q9HAT0 212 aaPredicted RBP14.97□□□□□ -0.01
PCDHGA11-201ENST00000398587 PLEKHA5Q9HAU0 1116 aa14.97□□□□□ -0.01
PCDHGA11-201ENST00000398587 PIK3C2AO00443 1686 aa14.97□□□□□ -0.01
PCDHGA11-201ENST00000398587 FMN2Q9NZ56 1722 aa14.96□□□□□ -0.01
PCDHGA11-201ENST00000398587 ITGB3P05106 788 aa14.96□□□□□ -0.01
PCDHGA11-201ENST00000398587 TAL1P17542 331 aaPredicted RBP14.96□□□□□ -0.01
PCDHGA11-201ENST00000398587 GPD1P21695 349 aa14.96□□□□□ -0.01
PCDHGA11-201ENST00000398587 TYK2P29597 1187 aa14.96□□□□□ -0.01
PCDHGA11-201ENST00000398587 HUNKP57058 714 aa14.96□□□□□ -0.01
PCDHGA11-201ENST00000398587 CYP24A1Q07973 514 aa14.96□□□□□ -0.01
PCDHGA11-201ENST00000398587 MPZL3Q6UWV2 235 aa14.96□□□□□ -0.01
PCDHGA11-201ENST00000398587 METTL7BQ6UX53 244 aa14.96□□□□□ -0.01
PCDHGA11-201ENST00000398587 KCNK18Q7Z418 384 aa14.96□□□□□ -0.01
PCDHGA11-201ENST00000398587 F8W8V4 182 aa14.96□□□□□ -0.01
PCDHGA11-201ENST00000398587 OPHN1O60890 802 aa14.96□□□□□ -0.01
PCDHGA11-201ENST00000398587 CPB1P15086 417 aa14.96□□□□□ -0.01
PCDHGA11-201ENST00000398587 PCSK1P29120 753 aa14.96□□□□□ -0.01
PCDHGA11-201ENST00000398587 GCLCP48506 637 aaPredicted RBP14.96□□□□□ -0.01
PCDHGA11-201ENST00000398587 MAPK7Q13164 816 aa14.96□□□□□ -0.01
PCDHGA11-201ENST00000398587 CD302Q8IX05 232 aa14.96□□□□□ -0.01
PCDHGA11-201ENST00000398587 SLC35C1Q96A29 364 aa14.96□□□□□ -0.01
PCDHGA11-201ENST00000398587 ZFATQ9P243 1243 aa14.96□□□□□ -0.01
PCDHGA11-201ENST00000398587 SPECC1L-ADORA2AF8WAN1 911 aa14.96□□□□□ -0.01
PCDHGA11-201ENST00000398587 HAUS5O94927 633 aa14.96□□□□□ -0.01
PCDHGA11-201ENST00000398587 RALAP11233 206 aa14.96□□□□□ -0.01
PCDHGA11-201ENST00000398587 ITGA4P13612 1032 aa14.96□□□□□ -0.01
PCDHGA11-201ENST00000398587 PNPLA4P41247 253 aa14.96□□□□□ -0.01
PCDHGA11-201ENST00000398587 CLCN3P51790 818 aa14.96□□□□□ -0.01
PCDHGA11-201ENST00000398587 GTF2A2P52657 109 aa14.96□□□□□ -0.01
PCDHGA11-201ENST00000398587 ARFIP2P53365 341 aa14.96□□□□□ -0.01
PCDHGA11-201ENST00000398587 DCAF4L1Q3SXM0 396 aa14.96□□□□□ -0.01
PCDHGA11-201ENST00000398587 SEZ6Q53EL9 994 aa14.96□□□□□ -0.01
PCDHGA11-201ENST00000398587 SPATA18Q8TC71 538 aa14.96□□□□□ -0.01
PCDHGA11-201ENST00000398587 SPIRE2Q8WWL2 714 aa14.96□□□□□ -0.01
PCDHGA11-201ENST00000398587 SPATC1LQ9H0A9 340 aa14.96□□□□□ -0.01
PCDHGA11-201ENST00000398587 PAK5Q9P286 719 aa14.96□□□□□ -0.01
PCDHGA11-201ENST00000398587 ZFP69BQ9UJL9 534 aa14.96□□□□□ -0.01
PCDHGA11-201ENST00000398587 UBQLN1Q9UMX0 589 aaKnown RBP14.96□□□□□ -0.01
PCDHGA11-201ENST00000398587 F5H423 210 aaPredicted RBP14.96□□□□□ -0.02
PCDHGA11-201ENST00000398587 GYG2O15488 501 aa14.96□□□□□ -0.02
PCDHGA11-201ENST00000398587 GRAP2O75791 330 aa14.96□□□□□ -0.02
PCDHGA11-201ENST00000398587 TSTA3Q13630 321 aaPredicted RBP14.96□□□□□ -0.02
PCDHGA11-201ENST00000398587 CRY2Q49AN0 593 aa14.96□□□□□ -0.02
PCDHGA11-201ENST00000398587 BOLA3Q53S33 107 aa14.96□□□□□ -0.02
PCDHGA11-201ENST00000398587 FSCBQ5H9T9 825 aa14.96□□□□□ -0.02
PCDHGA11-201ENST00000398587 SLC30A10Q6XR72 485 aa14.96□□□□□ -0.02
PCDHGA11-201ENST00000398587 SDCCAG3Q96C92 435 aa14.96□□□□□ -0.02
PCDHGA11-201ENST00000398587 EPN3Q9H201 632 aa14.96□□□□□ -0.02
PCDHGA11-201ENST00000398587 SP110Q9HB58 689 aa14.96□□□□□ -0.02
PCDHGA11-201ENST00000398587 LRRC4BQ9NT99 713 aa14.96□□□□□ -0.02
PCDHGA11-201ENST00000398587 DCTN4Q9UJW0 460 aa14.96□□□□□ -0.02
PCDHGA11-201ENST00000398587 SPAG7O75391 227 aa14.95□□□□□ -0.02
PCDHGA11-201ENST00000398587 PTF1AQ7RTS3 328 aa14.95□□□□□ -0.02
PCDHGA11-201ENST00000398587 SLC13A1Q9BZW2 595 aa14.95□□□□□ -0.02
PCDHGA11-201ENST00000398587 KIAA1257Q9ULG3 409 aa14.95□□□□□ -0.02
PCDHGA11-201ENST00000398587 EML1O00423 815 aa14.95□□□□□ -0.02
PCDHGA11-201ENST00000398587 SESN2P58004 480 aaPredicted RBP14.95□□□□□ -0.02
PCDHGA11-201ENST00000398587 KYNUQ16719 465 aa14.95□□□□□ -0.02
PCDHGA11-201ENST00000398587 SPATA2LQ8IUW3 424 aaPredicted RBP14.95□□□□□ -0.02
PCDHGA11-201ENST00000398587 ALKBH8Q96BT7 664 aaKnown RBP14.95□□□□□ -0.02
PCDHGA11-201ENST00000398587 MTMR12Q9C0I1 747 aa14.95□□□□□ -0.02
PCDHGA11-201ENST00000398587 AP3B1O00203 1094 aa14.95□□□□□ -0.02
PCDHGA11-201ENST00000398587 EIF3HO15372 352 aaKnown RBP eCLIP14.95□□□□□ -0.02
PCDHGA11-201ENST00000398587 PSTPIP1O43586 416 aa14.95□□□□□ -0.02
PCDHGA11-201ENST00000398587 NPTXRO95502 500 aa14.95□□□□□ -0.02
PCDHGA11-201ENST00000398587 PGK2P07205 417 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms