RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 TMEM35BQ8NCS4 154 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 ALKBH8Q96BT7 664 aaKnown RBP2.86□□□□□ -1.95
CHD9-202ENST00000398510 ACSF2Q96CM8 615 aaPredicted RBP2.86□□□□□ -1.95
CHD9-202ENST00000398510 ZNF496Q96IT1 587 aaPredicted RBP2.86□□□□□ -1.95
CHD9-202ENST00000398510 GJD4Q96KN9 370 aaPredicted RBP2.86□□□□□ -1.95
CHD9-202ENST00000398510 PAPOLBQ9NRJ5 636 aaKnown RBP2.86□□□□□ -1.95
CHD9-202ENST00000398510 IP6K2Q9UHH9 426 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 DDX41Q9UJV9 622 aaKnown RBP2.86□□□□□ -1.95
CHD9-202ENST00000398510 ZNF180Q9UJW8 692 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 PLXNB2O15031 1838 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 POTEFA5A3E0 1075 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 GDF11O95390 407 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 HTR1BP28222 390 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 ARL4CP56559 192 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 EXOSC10Q01780 885 aaKnown RBP2.86□□□□□ -1.95
CHD9-202ENST00000398510 SCGB2A2Q13296 93 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 ADAM9Q13443 819 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 IL18R1Q13478 541 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 TEAD4Q15561 434 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 CHRNA2Q15822 529 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 GSTA3Q16772 222 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 FAM26FQ5R3K3 315 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 ZNF280DQ6N043 979 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 HDDC2Q7Z4H3 204 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 RASGEF1AQ8N9B8 481 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 RIN3Q8TB24 985 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 PHACTR1Q9C0D0 580 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 USP44Q9H0E7 712 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.86□□□□□ -1.95
CHD9-202ENST00000398510 PRMT7Q9NVM4 692 aaPredicted RBP2.86□□□□□ -1.95
CHD9-202ENST00000398510 CEP72Q9P209 647 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 VPS18Q9P253 973 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 ANK1P16157 1881 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 EXOC1LA0A1B0GW35 172 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 VSTM5A8MXK1 200 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 SOX6P35712 828 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 TGFBR2P37173 567 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 AVPR1AP37288 418 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 RBP5P82980 135 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 SRSF11Q05519 484 aaKnown RBP2.86□□□□□ -1.95
CHD9-202ENST00000398510 LRRC74AQ0VAA2 488 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 RESTQ13127 1097 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 XRCC4Q13426 336 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 EFTUD2Q15029 972 aaKnown RBP eCLIP2.86□□□□□ -1.952e-6■■■■□ 24.8
CHD9-202ENST00000398510 MAN2A1Q16706 1144 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 FBXO31Q5XUX0 539 aaPredicted RBP2.86□□□□□ -1.95
CHD9-202ENST00000398510 FAM92BQ6ZTR7 304 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 PARP9Q8IXQ6 854 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 CENPSQ8N2Z9 138 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 SNIP1Q8TAD8 396 aaKnown RBP2.86□□□□□ -1.95
CHD9-202ENST00000398510 WDR60Q8WVS4 1066 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 LARP6Q9BRS8 491 aaKnown RBP2.86□□□□□ -1.95
CHD9-202ENST00000398510 NCKIPSDQ9NZQ3 722 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 SH3BP1Q9Y3L3 701 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 TAF1P21675 1872 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 AHDC1Q5TGY3 1603 aaPredicted RBP2.86□□□□□ -1.95
CHD9-202ENST00000398510 PIK3CDO00329 1044 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 FOXD2O60548 495 aaPredicted RBP2.86□□□□□ -1.95
CHD9-202ENST00000398510 ENTPD3O75355 529 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 MMP10P09238 476 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 PRLRP16471 622 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 NCF2P19878 526 aaPredicted RBP2.86□□□□□ -1.95
CHD9-202ENST00000398510 NR1D1P20393 614 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 RFC2P35250 354 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 RARS2Q5T160 578 aaKnown RBP2.86□□□□□ -1.95
CHD9-202ENST00000398510 TNS4Q8IZW8 715 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 SLC26A7Q8TE54 656 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 GRAMD1AQ96CP6 724 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 TMX3Q96JJ7 454 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 CEP19Q96LK0 163 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 SENP7Q9BQF6 1050 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 ANO3Q9BYT9 981 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 CCDC90BQ9GZT6 254 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 EFCC1Q9HA90 598 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 RIC8BQ9NVN3 520 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 PDCD11Q14690 1871 aaKnown RBP2.86□□□□□ -1.95
CHD9-202ENST00000398510 DOCK5Q9H7D0 1870 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 COL3A1P02461 1466 aaPredicted RBP2.86□□□□□ -1.95
CHD9-202ENST00000398510 FOCADQ5VW36 1801 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 A0A0J9YVX5 310 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 KRIT1O00522 736 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 CHL1O00533 1208 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 RASA4O43374 803 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 LSM8O95777 96 aaKnown RBP2.86□□□□□ -1.95
CHD9-202ENST00000398510 ADH1CP00326 375 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 MLNP12872 115 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 ATP1A3P13637 1013 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 NFKB1P19838 968 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 SLC11A2P49281 568 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 MXI1P50539 228 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 ZNF75DP51815 510 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 PRELPP51888 382 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 HAND2P61296 217 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 CCDC144BQ3MJ40 725 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 FAM47AQ5JRC9 791 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 NXNQ6DKJ4 435 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 DSTYKQ6XUX3 929 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 AOPEPQ8N6M6 819 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 DDI1Q8WTU0 396 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 FGD4Q96M96 766 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms