RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 CHRNB1P11230 501 aa13.13□□□□□ -0.31
TFF3-202ENST00000398431 MYL4P12829 197 aa13.13□□□□□ -0.31
TFF3-202ENST00000398431 PLS3P13797 630 aa13.13□□□□□ -0.31
TFF3-202ENST00000398431 GDI1P31150 447 aa13.13□□□□□ -0.31
TFF3-202ENST00000398431 ANP32AP39687 249 aaKnown RBP13.13□□□□□ -0.31
TFF3-202ENST00000398431 AARSP49588 968 aaKnown RBP eCLIP13.13□□□□□ -0.31
TFF3-202ENST00000398431 ATXN1P54253 815 aaKnown RBP13.13□□□□□ -0.31
TFF3-202ENST00000398431 SLC12A3P55017 1021 aa13.13□□□□□ -0.31
TFF3-202ENST00000398431 MCL1Q07820 350 aa13.13□□□□□ -0.31
TFF3-202ENST00000398431 GNL2Q13823 731 aaKnown RBP13.13□□□□□ -0.31
TFF3-202ENST00000398431 GAS6Q14393 721 aa13.13□□□□□ -0.31
TFF3-202ENST00000398431 TEAD2Q15562 447 aa13.13□□□□□ -0.31
TFF3-202ENST00000398431 ARSHQ5FYA8 562 aa13.13□□□□□ -0.31
TFF3-202ENST00000398431 WDR44Q5JSH3 913 aa13.13□□□□□ -0.31
TFF3-202ENST00000398431 IQCEQ6IPM2 695 aa13.13□□□□□ -0.31
TFF3-202ENST00000398431 ZNF280DQ6N043 979 aa13.13□□□□□ -0.31
TFF3-202ENST00000398431 ZPBP2Q6X784 338 aa13.13□□□□□ -0.31
TFF3-202ENST00000398431 DTHD1Q6ZMT9 781 aa13.13□□□□□ -0.31
TFF3-202ENST00000398431 FAM184AQ8NB25 1140 aa13.13□□□□□ -0.31
TFF3-202ENST00000398431 APPL2Q8NEU8 664 aa13.13□□□□□ -0.31
TFF3-202ENST00000398431 SHKBP1Q8TBC3 707 aa13.13□□□□□ -0.31
TFF3-202ENST00000398431 FAM3CQ92520 227 aa13.13□□□□□ -0.31
TFF3-202ENST00000398431 TIPINQ9BVW5 301 aa13.13□□□□□ -0.31
TFF3-202ENST00000398431 RAB34Q9BZG1 259 aa13.13□□□□□ -0.31
TFF3-202ENST00000398431 DNAJC25Q9H1X3 360 aa13.13□□□□□ -0.31
TFF3-202ENST00000398431 PLEKHA5Q9HAU0 1116 aa13.13□□□□□ -0.31
TFF3-202ENST00000398431 NCDNQ9UBB6 729 aa13.13□□□□□ -0.31
TFF3-202ENST00000398431 TICRRQ7Z2Z1 1910 aa13.13□□□□□ -0.31
TFF3-202ENST00000398431 DNAH14Q0VDD8 3507 aa13.13□□□□□ -0.31
TFF3-202ENST00000398431 MYH11P35749 1972 aa13.12□□□□□ -0.31
TFF3-202ENST00000398431 NPHP3-ACAD11A0A0J9YXS1 232 aa13.12□□□□□ -0.31
TFF3-202ENST00000398431 HEPACAM2A8MVW5 462 aa13.12□□□□□ -0.31
TFF3-202ENST00000398431 CLDN3O15551 220 aa13.12□□□□□ -0.31
TFF3-202ENST00000398431 ADRB2P07550 413 aa13.12□□□□□ -0.31
TFF3-202ENST00000398431 CXCL8P10145 99 aa13.12□□□□□ -0.31
TFF3-202ENST00000398431 MARCKSP29966 332 aaPredicted RBP13.12□□□□□ -0.31
TFF3-202ENST00000398431 TNFSF9P41273 254 aa13.12□□□□□ -0.31
TFF3-202ENST00000398431 STRN3Q13033 797 aa13.12□□□□□ -0.31
TFF3-202ENST00000398431 NOLC1Q14978 699 aaKnown RBP eCLIP13.12□□□□□ -0.31
TFF3-202ENST00000398431 TMC8Q8IU68 726 aa13.12□□□□□ -0.31
TFF3-202ENST00000398431 MFSD6LQ8IWD5 586 aa13.12□□□□□ -0.31
TFF3-202ENST00000398431 ZSCAN18Q8TBC5 510 aaPredicted RBP13.12□□□□□ -0.31
TFF3-202ENST00000398431 DEPDC1BQ8WUY9 529 aa13.12□□□□□ -0.31
TFF3-202ENST00000398431 KCNN1Q92952 543 aa13.12□□□□□ -0.31
TFF3-202ENST00000398431 LRRC3BQ96PB8 259 aa13.12□□□□□ -0.31
TFF3-202ENST00000398431 PLIN2Q99541 437 aa13.12□□□□□ -0.31
TFF3-202ENST00000398431 MKNK1Q9BUB5 465 aa13.12□□□□□ -0.31
TFF3-202ENST00000398431 FAM126AQ9BYI3 521 aaPredicted RBP13.12□□□□□ -0.31
TFF3-202ENST00000398431 PARD6AQ9NPB6 346 aa13.12□□□□□ -0.31
TFF3-202ENST00000398431 SH2B1Q9NRF2 756 aaPredicted RBP13.12□□□□□ -0.31
TFF3-202ENST00000398431 ANKFY1Q9P2R3 1169 aa13.12□□□□□ -0.31
TFF3-202ENST00000398431 KCNG1Q9UIX4 513 aa13.12□□□□□ -0.31
TFF3-202ENST00000398431 SMG5Q9UPR3 1016 aaKnown RBP13.12□□□□□ -0.31
TFF3-202ENST00000398431 NCOR2Q9Y618 2525 aa13.12□□□□□ -0.31
TFF3-202ENST00000398431 LACTBL1A8MY62 500 aa13.11□□□□□ -0.31
TFF3-202ENST00000398431 PPEF2O14830 753 aa13.11□□□□□ -0.31
TFF3-202ENST00000398431 FAM189A1O60320 539 aa13.11□□□□□ -0.31
TFF3-202ENST00000398431 CLTAP09496 248 aa13.11□□□□□ -0.31
TFF3-202ENST00000398431 CCNE1P24864 410 aa13.11□□□□□ -0.31
TFF3-202ENST00000398431 GUCY2FP51841 1108 aa13.11□□□□□ -0.31
TFF3-202ENST00000398431 ATP2C1P98194 919 aaPredicted RBP13.11□□□□□ -0.31
TFF3-202ENST00000398431 YWHAHQ04917 246 aaPredicted RBP13.11□□□□□ -0.31
TFF3-202ENST00000398431 DUSP4Q13115 394 aa13.11□□□□□ -0.31
TFF3-202ENST00000398431 GPR17Q13304 367 aa13.11□□□□□ -0.31
TFF3-202ENST00000398431 CENPPQ6IPU0 288 aa13.11□□□□□ -0.31
TFF3-202ENST00000398431 GPIHBP1Q8IV16 184 aa13.11□□□□□ -0.31
TFF3-202ENST00000398431 ELMOD1Q8N336 334 aa13.11□□□□□ -0.31
TFF3-202ENST00000398431 GPR161Q8N6U8 529 aaKnown RBP13.11□□□□□ -0.31
TFF3-202ENST00000398431 LEMD2Q8NC56 503 aa13.11□□□□□ -0.31
TFF3-202ENST00000398431 LRRC15Q8TF66 581 aa13.11□□□□□ -0.31
TFF3-202ENST00000398431 PGLYRP2Q96PD5 576 aa13.11□□□□□ -0.31
TFF3-202ENST00000398431 ASAH2Q9NR71 780 aa13.11□□□□□ -0.31
TFF3-202ENST00000398431 YIPF1Q9Y548 306 aa13.11□□□□□ -0.31
TFF3-202ENST00000398431 PIAS3Q9Y6X2 628 aa13.11□□□□□ -0.31
TFF3-202ENST00000398431 A0A1W2PRU2 124 aa13.1□□□□□ -0.31
TFF3-202ENST00000398431 ZNF263O14978 683 aa13.1□□□□□ -0.31
TFF3-202ENST00000398431 EIF5BO60841 1220 aaKnown RBP13.1□□□□□ -0.31
TFF3-202ENST00000398431 PLA2G4BP0C869 781 aa13.1□□□□□ -0.31
TFF3-202ENST00000398431 CPB1P15086 417 aa13.1□□□□□ -0.31
TFF3-202ENST00000398431 CYP3A5P20815 502 aa13.1□□□□□ -0.31
TFF3-202ENST00000398431 SMTNP53814 917 aa13.1□□□□□ -0.31
TFF3-202ENST00000398431 NCKAP1LP55160 1127 aa13.1□□□□□ -0.31
TFF3-202ENST00000398431 MLLT6P55198 1093 aaPredicted RBP13.1□□□□□ -0.31
TFF3-202ENST00000398431 SATB1Q01826 763 aa13.1□□□□□ -0.31
TFF3-202ENST00000398431 CACNB1Q02641 598 aaPredicted RBP13.1□□□□□ -0.31
TFF3-202ENST00000398431 ZRSR1Q15695 479 aaKnown RBP13.1□□□□□ -0.31
TFF3-202ENST00000398431 TMEM119Q4V9L6 283 aa13.1□□□□□ -0.31
TFF3-202ENST00000398431 STXBP5Q5T5C0 1151 aa13.1□□□□□ -0.31
TFF3-202ENST00000398431 HAUS6Q7Z4H7 955 aa13.1□□□□□ -0.31
TFF3-202ENST00000398431 ARID3BQ8IVW6 561 aaPredicted RBP13.1□□□□□ -0.31
TFF3-202ENST00000398431 KCTD17Q8N5Z5 321 aa13.1□□□□□ -0.31
TFF3-202ENST00000398431 ATAD1Q8NBU5 361 aa13.1□□□□□ -0.31
TFF3-202ENST00000398431 KIF12Q96FN5 646 aa13.1□□□□□ -0.31
TFF3-202ENST00000398431 TMEM209Q96SK2 561 aa13.1□□□□□ -0.31
TFF3-202ENST00000398431 GPR88Q9GZN0 384 aa13.1□□□□□ -0.31
TFF3-202ENST00000398431 UBQLN1Q9UMX0 589 aaKnown RBP13.1□□□□□ -0.31
TFF3-202ENST00000398431 SLC27A5Q9Y2P5 690 aa13.1□□□□□ -0.31
TFF3-202ENST00000398431 CHADO15335 359 aa13.09□□□□□ -0.31
TFF3-202ENST00000398431 HRO43593 1189 aa13.09□□□□□ -0.31
TFF3-202ENST00000398431 HOXC13P31276 330 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms