RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 ANKRD36BP1Q96IX9 119 aa15.43■□□□□ 0.06
HDDC2-202ENST00000398153 MFSD14AQ96MC6 490 aa15.43■□□□□ 0.06
HDDC2-202ENST00000398153 RIPOR3Q96MK2 946 aa15.43■□□□□ 0.06
HDDC2-202ENST00000398153 FNBP1Q96RU3 617 aa15.43■□□□□ 0.06
HDDC2-202ENST00000398153 UHRF1Q96T88 793 aaPredicted RBP15.43■□□□□ 0.06
HDDC2-202ENST00000398153 COL25A1Q9BXS0 654 aaPredicted RBP15.43■□□□□ 0.06
HDDC2-202ENST00000398153 PDE11AQ9HCR9 933 aa15.43■□□□□ 0.06
HDDC2-202ENST00000398153 INTS13Q9NVM9 706 aa15.43■□□□□ 0.06
HDDC2-202ENST00000398153 ZDHHC7Q9NXF8 308 aa15.43■□□□□ 0.06
HDDC2-202ENST00000398153 R3HCC1Q9Y3T6 440 aaKnown RBP15.43■□□□□ 0.06
HDDC2-202ENST00000398153 USP15Q9Y4E8 981 aaPredicted RBP15.43■□□□□ 0.06
HDDC2-202ENST00000398153 SPDYE4A6NLX3 237 aa15.42■□□□□ 0.06
HDDC2-202ENST00000398153 I3L4J1 428 aa15.42■□□□□ 0.06
HDDC2-202ENST00000398153 GADD45BO75293 160 aaPredicted RBP15.42■□□□□ 0.06
HDDC2-202ENST00000398153 TNNC2P02585 160 aa15.42■□□□□ 0.06
HDDC2-202ENST00000398153 CYP11A1P05108 521 aa15.42■□□□□ 0.06
HDDC2-202ENST00000398153 TMEM191BP0C7N4 346 aa15.42■□□□□ 0.06
HDDC2-202ENST00000398153 ODC1P11926 461 aa15.42■□□□□ 0.06
HDDC2-202ENST00000398153 IL9P15248 144 aa15.42■□□□□ 0.06
HDDC2-202ENST00000398153 HOXA9P31269 272 aa15.42■□□□□ 0.06
HDDC2-202ENST00000398153 OR1D2P34982 312 aa15.42■□□□□ 0.06
HDDC2-202ENST00000398153 CYP2J2P51589 502 aa15.42■□□□□ 0.06
HDDC2-202ENST00000398153 AP3M2P53677 418 aa15.42■□□□□ 0.06
HDDC2-202ENST00000398153 RBP5P82980 135 aa15.42■□□□□ 0.06
HDDC2-202ENST00000398153 YWHAHQ04917 246 aaPredicted RBP15.42■□□□□ 0.06
HDDC2-202ENST00000398153 ENPEPQ07075 957 aa15.42■□□□□ 0.06
HDDC2-202ENST00000398153 CYP24A1Q07973 514 aa15.42■□□□□ 0.06
HDDC2-202ENST00000398153 CBX2Q14781 532 aaPredicted RBP15.42■□□□□ 0.06
HDDC2-202ENST00000398153 CLUL1Q15846 466 aa15.42■□□□□ 0.06
HDDC2-202ENST00000398153 ATAT1Q5SQI0 421 aa15.42■□□□□ 0.06
HDDC2-202ENST00000398153 TPGS2Q68CL5 300 aa15.42■□□□□ 0.06
HDDC2-202ENST00000398153 USP37Q86T82 979 aa15.42■□□□□ 0.06
HDDC2-202ENST00000398153 PALB2Q86YC2 1186 aa15.42■□□□□ 0.06
HDDC2-202ENST00000398153 ADHFE1Q8IWW8 467 aa15.42■□□□□ 0.06
HDDC2-202ENST00000398153 ZNF461Q8TAF7 563 aa15.42■□□□□ 0.06
HDDC2-202ENST00000398153 NOC3LQ8WTT2 800 aaKnown RBP15.42■□□□□ 0.06
HDDC2-202ENST00000398153 MAN1C1Q9NR34 630 aa15.42■□□□□ 0.06
HDDC2-202ENST00000398153 PCDHA5Q9Y5H7 936 aa15.42■□□□□ 0.06
HDDC2-202ENST00000398153 CDY1Q9Y6F8 540 aa15.42■□□□□ 0.06
HDDC2-202ENST00000398153 KPNA7A9QM74 516 aa15.41■□□□□ 0.06
HDDC2-202ENST00000398153 ABLIM3O94929 683 aa15.41■□□□□ 0.06
HDDC2-202ENST00000398153 NR3C1P04150 777 aa15.41■□□□□ 0.06
HDDC2-202ENST00000398153 HNRNPA1P09651 372 aaKnown RBP eCLIP15.41■□□□□ 0.06
HDDC2-202ENST00000398153 RPL17P18621 184 aaKnown RBP15.41■□□□□ 0.06
HDDC2-202ENST00000398153 GUCY2FP51841 1108 aa15.41■□□□□ 0.06
HDDC2-202ENST00000398153 EDRF1Q3B7T1 1238 aa15.41■□□□□ 0.06
HDDC2-202ENST00000398153 GPR149Q86SP6 731 aa15.41■□□□□ 0.06
HDDC2-202ENST00000398153 CSGALNACT2Q8N6G5 542 aa15.41■□□□□ 0.06
HDDC2-202ENST00000398153 C1orf127Q8N9H9 656 aa15.41■□□□□ 0.06
HDDC2-202ENST00000398153 RDH13Q8NBN7 331 aa15.41■□□□□ 0.06
HDDC2-202ENST00000398153 KREMEN2Q8NCW0 462 aa15.41■□□□□ 0.06
HDDC2-202ENST00000398153 SPATA18Q8TC71 538 aa15.41■□□□□ 0.06
HDDC2-202ENST00000398153 SENP8Q96LD8 212 aa15.41■□□□□ 0.06
HDDC2-202ENST00000398153 PHF7Q9BWX1 381 aaPredicted RBP15.41■□□□□ 0.06
HDDC2-202ENST00000398153 FBXW11Q9UKB1 542 aa15.41■□□□□ 0.06
HDDC2-202ENST00000398153 FRMD4BQ9Y2L6 1034 aa15.41■□□□□ 0.06
HDDC2-202ENST00000398153 TCF20Q9UGU0 1960 aaKnown RBP15.41■□□□□ 0.06
HDDC2-202ENST00000398153 PLXNA3P51805 1871 aa15.41■□□□□ 0.06
HDDC2-202ENST00000398153 C19orf67A6NJJ6 358 aa15.4■□□□□ 0.06
HDDC2-202ENST00000398153 OR6C75A6NL08 312 aa15.4■□□□□ 0.06
HDDC2-202ENST00000398153 DLL1O00548 723 aa15.4■□□□□ 0.06
HDDC2-202ENST00000398153 ZMYND10O75800 440 aa15.4■□□□□ 0.06
HDDC2-202ENST00000398153 ITGB3P05106 788 aa15.4■□□□□ 0.06
HDDC2-202ENST00000398153 POU2F2P09086 479 aa15.4■□□□□ 0.06
HDDC2-202ENST00000398153 TNNI1P19237 187 aa15.4■□□□□ 0.06
HDDC2-202ENST00000398153 WNT7BP56706 349 aa15.4■□□□□ 0.06
HDDC2-202ENST00000398153 CLDN10P78369 228 aa15.4■□□□□ 0.06
HDDC2-202ENST00000398153 MYO1EQ12965 1108 aa15.4■□□□□ 0.06
HDDC2-202ENST00000398153 STIM1Q13586 685 aa15.4■□□□□ 0.06
HDDC2-202ENST00000398153 CTXN3Q4LDR2 81 aa15.4■□□□□ 0.06
HDDC2-202ENST00000398153 LIN9Q5TKA1 542 aa15.4■□□□□ 0.06
HDDC2-202ENST00000398153 CCDC149Q6ZUS6 474 aa15.4■□□□□ 0.06
HDDC2-202ENST00000398153 METTL23Q86XA0 190 aa15.4■□□□□ 0.06
HDDC2-202ENST00000398153 CXorf38Q8TB03 319 aa15.4■□□□□ 0.06
HDDC2-202ENST00000398153 GBP4Q96PP9 640 aa15.4■□□□□ 0.06
HDDC2-202ENST00000398153 CGRRF1Q99675 332 aa15.4■□□□□ 0.06
HDDC2-202ENST00000398153 GDAP2Q9NXN4 497 aa15.4■□□□□ 0.06
HDDC2-202ENST00000398153 FBXL5Q9UKA1 691 aa15.4■□□□□ 0.06
HDDC2-202ENST00000398153 AGAP1Q9UPQ3 857 aa15.4■□□□□ 0.06
HDDC2-202ENST00000398153 VCANP13611 3396 aa15.39■□□□□ 0.05
HDDC2-202ENST00000398153 CCDC195A0A1B0GUA6 201 aa15.39■□□□□ 0.05
HDDC2-202ENST00000398153 PPEF2O14830 753 aa15.39■□□□□ 0.05
HDDC2-202ENST00000398153 IKBKBO14920 756 aa15.39■□□□□ 0.05
HDDC2-202ENST00000398153 ATF2P15336 505 aa15.39■□□□□ 0.05
HDDC2-202ENST00000398153 POLR2BP30876 1174 aaKnown RBP15.39■□□□□ 0.05
HDDC2-202ENST00000398153 MCCD1P59942 119 aaPredicted RBP15.39■□□□□ 0.05
HDDC2-202ENST00000398153 ZP2Q05996 745 aa15.39■□□□□ 0.05
HDDC2-202ENST00000398153 ZCWPW2Q504Y3 356 aa15.39■□□□□ 0.05
HDDC2-202ENST00000398153 RARS2Q5T160 578 aaKnown RBP15.39■□□□□ 0.05
HDDC2-202ENST00000398153 OVOS1Q6IE37 1185 aa15.39■□□□□ 0.05
HDDC2-202ENST00000398153 CENPPQ6IPU0 288 aa15.39■□□□□ 0.05
HDDC2-202ENST00000398153 FOXR2Q6PJQ5 311 aa15.39■□□□□ 0.05
HDDC2-202ENST00000398153 DPH6Q7L8W6 267 aa15.39■□□□□ 0.05
HDDC2-202ENST00000398153 GLYCTKQ8IVS8 523 aa15.39■□□□□ 0.05
HDDC2-202ENST00000398153 TMEM86AQ8N2M4 240 aa15.39■□□□□ 0.05
HDDC2-202ENST00000398153 TMC2Q8TDI7 906 aa15.39■□□□□ 0.05
HDDC2-202ENST00000398153 PARD3BQ8TEW8 1205 aa15.39■□□□□ 0.05
HDDC2-202ENST00000398153 BORCS6Q96GS4 357 aa15.39■□□□□ 0.05
HDDC2-202ENST00000398153 PRKD2Q9BZL6 878 aa15.39■□□□□ 0.05
HDDC2-202ENST00000398153 MTMR12Q9C0I1 747 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms