RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 ILDR2Q71H61 639 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 RRAGAQ7L523 313 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 R3HCC1LQ7Z5L2 792 aaKnown RBP2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 CPLX4Q7Z7G2 160 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 PPP1R3BQ86XI6 285 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 CREG2Q8IUH2 290 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 TMEM57Q8N5G2 664 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 NGEFQ8N5V2 710 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 TMEM52Q8NDY8 209 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 GPR156Q8NFN8 814 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 WDR48Q8TAF3 677 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 PHOSPHO1Q8TCT1 267 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 MGARPQ8TDB4 240 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 CSGALNACT1Q8TDX6 532 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 SSH3Q8TE77 659 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 CLEC4DQ8WXI8 215 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 EZH1Q92800 747 aaPredicted RBP2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 UBE2FQ969M7 185 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 TRIM43Q96BQ3 446 aaPredicted RBP2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 SYTL4Q96C24 671 aaPredicted RBP2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 RNF125Q96EQ8 232 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 SNX27Q96L92 541 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 JAKMIP1Q96N16 626 aaKnown RBP2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 TRAPPC9Q96Q05 1148 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 DMRTA2Q96SC8 542 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 DBNDD2Q9BQY9 259 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 PDCD2LQ9BRP1 358 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 RTKNQ9BST9 563 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 C1orf43Q9BWL3 253 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 MRPL9Q9BYD2 267 aaKnown RBP2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 SEZ6LQ9BYH1 1024 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 TRIM54Q9BYV2 358 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 ZNF518BQ9C0D4 1074 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 KIAA1683Q9H0B3 1180 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 BRD8Q9H0E9 1235 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 KCNF1Q9H3M0 494 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 SYNCQ9H7C4 482 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 NOD2Q9HC29 1040 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 HEYLQ9NQ87 328 aaPredicted RBP2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 PLSCR4Q9NRQ2 329 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 C1GALT1Q9NS00 363 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 ATP8A2Q9NTI2 1148 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 TMEM160Q9NX00 188 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 CALCOCO1Q9P1Z2 691 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 ASH2LQ9UBL3 628 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 SCOCQ9UIL1 159 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 TBX20Q9UMR3 447 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 PCDHGB4Q9UN71 923 aa2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 MTO1Q9Y2Z2 717 aaKnown RBP2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 TDRD9Q8NDG6 1382 aaKnown RBP2.36□□□□□ -2.03
HMGN2P39-201ENST00000398005 BTBD11A6QL63 1104 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 GOLGA6L6A8MZA4 724 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 F8W735 103 aaPredicted RBP2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 H0Y3Z8 333 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 ACOT7O00154 380 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 NFIBO00712 420 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 DNPH1O43598 174 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 PRAMEF4O60810 478 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 COBLO75128 1261 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 PTP4A3O75365 173 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 TMEM63AO94886 807 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 ANXA1P04083 346 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 A1BGP04217 495 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 FTH1P19P0C7X4 201 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 FAM200BP0CF97 657 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 HSPA1AP0DMV8 641 aaKnown RBP2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 HSPA1BP0DMV9 641 aaKnown RBP2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 BMP3P12645 472 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 ATP6V1B1P15313 513 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 PORP16435 677 aaPredicted RBP2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 NPPBP16860 134 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 HDCP19113 662 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 PTGS1P23219 599 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 MAP4P27816 1152 aaKnown RBP2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 ABCD3P28288 659 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 GABRB3P28472 473 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 PRDX5P30044 214 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 ECHS1P30084 290 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 PAFAH1B1P43034 410 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 KCNC1P48547 511 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 ZNF131P52739 623 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 COPAP53621 1224 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 SEC24CP53992 1094 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 BCAT1P54687 386 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 ALDH18A1P54886 795 aaKnown RBP2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 MC1RQ01726 317 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 TLE1Q04724 770 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 EGR3Q06889 387 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 DBPQ10586 325 aaPredicted RBP2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 CHAF1BQ13112 559 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 TRIM28Q13263 835 aaKnown RBP2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 CTBP1Q13363 440 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 MPP3Q13368 585 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 ADAM9Q13443 819 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 PRPF4BQ13523 1007 aaKnown RBP2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 DCTN1Q14203 1278 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 BECN1Q14457 450 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 HABP2Q14520 560 aaPredicted RBP2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 SMC1AQ14683 1233 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms