RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 CTXN3Q4LDR2 81 aa27.37■■□□□ 1.97
TSPAN4-207ENST00000397411 SPATA31D4Q6ZUB0 917 aa27.37■■□□□ 1.97
TSPAN4-207ENST00000397411 C1orf127Q8N9H9 656 aa27.37■■□□□ 1.97
TSPAN4-207ENST00000397411 MSLNLQ96KJ4 702 aa27.37■■□□□ 1.97
TSPAN4-207ENST00000397411 SENP8Q96LD8 212 aa27.37■■□□□ 1.97
TSPAN4-207ENST00000397411 POP1Q99575 1024 aaKnown RBP27.37■■□□□ 1.97
TSPAN4-207ENST00000397411 CGRRF1Q99675 332 aa27.37■■□□□ 1.97
TSPAN4-207ENST00000397411 MTRRQ9UBK8 725 aa27.37■■□□□ 1.97
TSPAN4-207ENST00000397411 TIMM13Q9Y5L4 95 aaPredicted RBP27.37■■□□□ 1.97
TSPAN4-207ENST00000397411 BACE2Q9Y5Z0 518 aa27.37■■□□□ 1.97
TSPAN4-207ENST00000397411 M0QZQ0 153 aa27.36■■□□□ 1.97
TSPAN4-207ENST00000397411 PSMA7O14818 248 aa27.36■■□□□ 1.97
TSPAN4-207ENST00000397411 PHACTR2O75167 634 aa27.36■■□□□ 1.97
TSPAN4-207ENST00000397411 ODC1P11926 461 aa27.36■■□□□ 1.97
TSPAN4-207ENST00000397411 CASP4P49662 377 aa27.36■■□□□ 1.97
TSPAN4-207ENST00000397411 ARPP19P56211 112 aa27.36■■□□□ 1.97
TSPAN4-207ENST00000397411 BFSP1Q12934 665 aa27.36■■□□□ 1.97
TSPAN4-207ENST00000397411 NFIL3Q16649 462 aa27.36■■□□□ 1.97
TSPAN4-207ENST00000397411 COBLL1Q53SF7 1204 aa27.36■■□□□ 1.97
TSPAN4-207ENST00000397411 CES5AQ6NT32 575 aa27.36■■□□□ 1.97
TSPAN4-207ENST00000397411 METTL23Q86XA0 190 aa27.36■■□□□ 1.97
TSPAN4-207ENST00000397411 OR5B17Q8NGF7 314 aa27.36■■□□□ 1.97
TSPAN4-207ENST00000397411 TMEM174Q8WUU8 243 aa27.36■■□□□ 1.97
TSPAN4-207ENST00000397411 KIAA1468Q9P260 1216 aa27.36■■□□□ 1.97
TSPAN4-207ENST00000397411 CDY1Q9Y6F8 540 aa27.36■■□□□ 1.97
TSPAN4-207ENST00000397411 TCF20Q9UGU0 1960 aaKnown RBP27.36■■□□□ 1.97
TSPAN4-207ENST00000397411 SCN1AP35498 2009 aa27.35■■□□□ 1.97
TSPAN4-207ENST00000397411 KPNA7A9QM74 516 aa27.35■■□□□ 1.97
TSPAN4-207ENST00000397411 CYB561D2O14569 222 aa27.35■■□□□ 1.97
TSPAN4-207ENST00000397411 CETN3O15182 167 aa27.35■■□□□ 1.97
TSPAN4-207ENST00000397411 KRT13P13646 458 aa27.35■■□□□ 1.97
TSPAN4-207ENST00000397411 YWHAHQ04917 246 aaPredicted RBP27.35■■□□□ 1.97
TSPAN4-207ENST00000397411 MYO1EQ12965 1108 aa27.35■■□□□ 1.97
TSPAN4-207ENST00000397411 SMAD4Q13485 552 aaKnown RBP27.35■■□□□ 1.97
TSPAN4-207ENST00000397411 EDRF1Q3B7T1 1238 aa27.35■■□□□ 1.97
TSPAN4-207ENST00000397411 ZNF280DQ6N043 979 aa27.35■■□□□ 1.97
TSPAN4-207ENST00000397411 ADSSL1Q8N142 457 aa27.35■■□□□ 1.97
TSPAN4-207ENST00000397411 DHTKD1Q96HY7 919 aaPredicted RBP27.35■■□□□ 1.97
TSPAN4-207ENST00000397411 FAM84AQ96KN4 292 aa27.35■■□□□ 1.97
TSPAN4-207ENST00000397411 CLSTN2Q9H4D0 955 aa27.35■■□□□ 1.97
TSPAN4-207ENST00000397411 MAN1C1Q9NR34 630 aa27.35■■□□□ 1.97
TSPAN4-207ENST00000397411 GRXCR2A6NFK2 248 aa27.34■■□□□ 1.97
TSPAN4-207ENST00000397411 SPTLC1O15269 473 aa27.34■■□□□ 1.97
TSPAN4-207ENST00000397411 TGM5O43548 720 aa27.34■■□□□ 1.97
TSPAN4-207ENST00000397411 PSMC2P35998 433 aaKnown RBP27.34■■□□□ 1.97
TSPAN4-207ENST00000397411 AARSP49588 968 aaKnown RBP eCLIP27.34■■□□□ 1.978e-6■■■■■ 52.4
TSPAN4-207ENST00000397411 TRPC3Q13507 836 aa27.34■■□□□ 1.97
TSPAN4-207ENST00000397411 MORC3Q14149 939 aa27.34■■□□□ 1.97
TSPAN4-207ENST00000397411 RARS2Q5T160 578 aaKnown RBP27.34■■□□□ 1.97
TSPAN4-207ENST00000397411 CENPPQ6IPU0 288 aa27.34■■□□□ 1.97
TSPAN4-207ENST00000397411 KLHL10Q6JEL2 608 aa27.34■■□□□ 1.97
TSPAN4-207ENST00000397411 TRAPPC11Q7Z392 1133 aa27.34■■□□□ 1.97
TSPAN4-207ENST00000397411 LRRC52Q8N7C0 313 aa27.34■■□□□ 1.97
TSPAN4-207ENST00000397411 C12orf76Q8N812 135 aaPredicted RBP27.34■■□□□ 1.97
TSPAN4-207ENST00000397411 DSEQ9UL01 958 aa27.34■■□□□ 1.97
TSPAN4-207ENST00000397411 MBTPS2O43462 519 aa27.33■■□□□ 1.97
TSPAN4-207ENST00000397411 CLSTN1O94985 981 aa27.33■■□□□ 1.97
TSPAN4-207ENST00000397411 C1RP00736 705 aa27.33■■□□□ 1.97
TSPAN4-207ENST00000397411 BMP1P13497 986 aa27.33■■□□□ 1.97
TSPAN4-207ENST00000397411 TYMPP19971 482 aa27.33■■□□□ 1.97
TSPAN4-207ENST00000397411 AP3M2P53677 418 aa27.33■■□□□ 1.97
TSPAN4-207ENST00000397411 RAB33AQ14088 237 aa27.33■■□□□ 1.97
TSPAN4-207ENST00000397411 ANKRD40Q6AI12 368 aa27.33■■□□□ 1.97
TSPAN4-207ENST00000397411 OVOS1Q6IE37 1185 aa27.33■■□□□ 1.97
TSPAN4-207ENST00000397411 SYCE2Q6PIF2 218 aa27.33■■□□□ 1.97
TSPAN4-207ENST00000397411 FAM186BQ8IYM0 893 aa27.33■■□□□ 1.97
TSPAN4-207ENST00000397411 KREMEN2Q8NCW0 462 aa27.33■■□□□ 1.97
TSPAN4-207ENST00000397411 PARD3BQ8TEW8 1205 aa27.33■■□□□ 1.97
TSPAN4-207ENST00000397411 NUP62CLQ9H1M0 184 aa27.33■■□□□ 1.97
TSPAN4-207ENST00000397411 PLEKHA4Q9H4M7 779 aa27.33■■□□□ 1.97
TSPAN4-207ENST00000397411 PLXNA3P51805 1871 aa27.33■■□□□ 1.97
TSPAN4-207ENST00000397411 PTPRJQ12913 1337 aa27.33■■□□□ 1.97
TSPAN4-207ENST00000397411 ADAM12O43184 909 aa27.32■■□□□ 1.96
TSPAN4-207ENST00000397411 BIRC3Q13489 604 aa27.32■■□□□ 1.96
TSPAN4-207ENST00000397411 MRPL58Q14197 206 aaKnown RBP27.32■■□□□ 1.96
TSPAN4-207ENST00000397411 THEM5Q8N1Q8 247 aa27.32■■□□□ 1.96
TSPAN4-207ENST00000397411 TRIML1Q8N9V2 468 aa27.32■■□□□ 1.96
TSPAN4-207ENST00000397411 SMRP1Q8NCR6 262 aa27.32■■□□□ 1.96
TSPAN4-207ENST00000397411 TMC2Q8TDI7 906 aa27.32■■□□□ 1.96
TSPAN4-207ENST00000397411 HDAC7Q8WUI4 952 aa27.32■■□□□ 1.96
TSPAN4-207ENST00000397411 HPDLQ96IR7 371 aa27.32■■□□□ 1.96
TSPAN4-207ENST00000397411 OXCT2Q9BYC2 517 aaPredicted RBP27.32■■□□□ 1.96
TSPAN4-207ENST00000397411 SFXN1Q9H9B4 322 aa27.32■■□□□ 1.96
TSPAN4-207ENST00000397411 FBXL5Q9UKA1 691 aa27.32■■□□□ 1.96
TSPAN4-207ENST00000397411 MTCL1Q9Y4B5 1905 aaKnown RBP27.31■■□□□ 1.96
TSPAN4-207ENST00000397411 MAPK13O15264 365 aa27.31■■□□□ 1.96
TSPAN4-207ENST00000397411 HUS1O60921 280 aa27.31■■□□□ 1.96
TSPAN4-207ENST00000397411 CCNE1P24864 410 aa27.31■■□□□ 1.96
TSPAN4-207ENST00000397411 ELF1P32519 619 aa27.31■■□□□ 1.96
TSPAN4-207ENST00000397411 VAMP7P51809 220 aa27.31■■□□□ 1.96
TSPAN4-207ENST00000397411 ITIH3Q06033 890 aa27.31■■□□□ 1.96
TSPAN4-207ENST00000397411 ZCWPW2Q504Y3 356 aa27.31■■□□□ 1.96
TSPAN4-207ENST00000397411 LIN9Q5TKA1 542 aa27.31■■□□□ 1.96
TSPAN4-207ENST00000397411 LILRA6Q6PI73 481 aa27.31■■□□□ 1.96
TSPAN4-207ENST00000397411 RSPO2Q6UXX9 243 aaPredicted RBP27.31■■□□□ 1.96
TSPAN4-207ENST00000397411 INTS8Q75QN2 995 aaKnown RBP27.31■■□□□ 1.96
TSPAN4-207ENST00000397411 SIX4Q9UIU6 781 aa27.31■■□□□ 1.96
TSPAN4-207ENST00000397411 USP15Q9Y4E8 981 aaPredicted RBP27.31■■□□□ 1.96
TSPAN4-207ENST00000397411 LRRIQ3A6PVS8 624 aaPredicted RBP27.3■■□□□ 1.96
TSPAN4-207ENST00000397411 AKAP3O75969 853 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 522.5 ms