RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 SMOC1Q9H4F8 434 aa9.26□□□□□ -0.93
SCFD1-202ENST00000396629 TTC12Q9H892 705 aaPredicted RBP9.26□□□□□ -0.93
SCFD1-202ENST00000396629 SLC38A7Q9NVC3 462 aa9.26□□□□□ -0.93
SCFD1-202ENST00000396629 OBP2AQ9NY56 170 aa9.26□□□□□ -0.93
SCFD1-202ENST00000396629 ATG2BQ96BY7 2078 aa9.25□□□□□ -0.93
SCFD1-202ENST00000396629 DENND4CQ5VZ89 1909 aa9.25□□□□□ -0.93
SCFD1-202ENST00000396629 KCNE1P15382 129 aa9.25□□□□□ -0.93
SCFD1-202ENST00000396629 CYP11B2P19099 503 aa9.25□□□□□ -0.93
SCFD1-202ENST00000396629 RPL9P32969 192 aaKnown RBP9.25□□□□□ -0.93
SCFD1-202ENST00000396629 CALCRLQ16602 461 aa9.25□□□□□ -0.93
SCFD1-202ENST00000396629 ZNF280DQ6N043 979 aa9.25□□□□□ -0.93
SCFD1-202ENST00000396629 PKN3Q6P5Z2 889 aa9.25□□□□□ -0.93
SCFD1-202ENST00000396629 RNF19BQ6ZMZ0 732 aa9.25□□□□□ -0.93
SCFD1-202ENST00000396629 APBB1IPQ7Z5R6 666 aaPredicted RBP9.25□□□□□ -0.93
SCFD1-202ENST00000396629 ARID3BQ8IVW6 561 aaPredicted RBP9.25□□□□□ -0.93
SCFD1-202ENST00000396629 DEPTORQ8TB45 409 aa9.25□□□□□ -0.93
SCFD1-202ENST00000396629 TNFRSF25Q93038 417 aa9.25□□□□□ -0.93
SCFD1-202ENST00000396629 ZMAT2Q96NC0 199 aaKnown RBP9.25□□□□□ -0.93
SCFD1-202ENST00000396629 MTMR9Q96QG7 549 aa9.25□□□□□ -0.93
SCFD1-202ENST00000396629 DNAJC25Q9H1X3 360 aa9.25□□□□□ -0.93
SCFD1-202ENST00000396629 SLITRK6Q9H5Y7 841 aa9.25□□□□□ -0.93
SCFD1-202ENST00000396629 ZSWIM6Q9HCJ5 1215 aa9.25□□□□□ -0.93
SCFD1-202ENST00000396629 TUFT1Q9NNX1 390 aa9.25□□□□□ -0.93
SCFD1-202ENST00000396629 GJB4Q9NTQ9 266 aa9.25□□□□□ -0.93
SCFD1-202ENST00000396629 GTSE1Q9NYZ3 720 aa9.25□□□□□ -0.93
SCFD1-202ENST00000396629 TNFSF13BQ9Y275 285 aa9.25□□□□□ -0.93
SCFD1-202ENST00000396629 YIPF1Q9Y548 306 aa9.25□□□□□ -0.93
SCFD1-202ENST00000396629 CEP295Q9C0D2 2601 aa9.25□□□□□ -0.93
SCFD1-202ENST00000396629 KIAA1549LQ6ZVL6 1849 aa9.25□□□□□ -0.93
SCFD1-202ENST00000396629 STK36Q9NRP7 1315 aa9.25□□□□□ -0.93
SCFD1-202ENST00000396629 A0A1W2PRU2 124 aa9.24□□□□□ -0.93
SCFD1-202ENST00000396629 GIPC1O14908 333 aa9.24□□□□□ -0.93
SCFD1-202ENST00000396629 VNN2O95498 520 aa9.24□□□□□ -0.93
SCFD1-202ENST00000396629 CCDC192P0DO97 292 aa9.24□□□□□ -0.93
SCFD1-202ENST00000396629 XBP1P17861 261 aa9.24□□□□□ -0.93
SCFD1-202ENST00000396629 LIG1P18858 919 aa9.24□□□□□ -0.93
SCFD1-202ENST00000396629 WEE1P30291 646 aa9.24□□□□□ -0.93
SCFD1-202ENST00000396629 PXNP49023 591 aaPredicted RBP9.24□□□□□ -0.93
SCFD1-202ENST00000396629 NOVA1P51513 510 aaKnown RBP9.24□□□□□ -0.93
SCFD1-202ENST00000396629 EFNA5P52803 228 aa9.24□□□□□ -0.93
SCFD1-202ENST00000396629 PLD1Q13393 1074 aa9.24□□□□□ -0.93
SCFD1-202ENST00000396629 PPP2R5AQ15172 486 aa9.24□□□□□ -0.93
SCFD1-202ENST00000396629 PLK5Q496M5 336 aa9.24□□□□□ -0.93
SCFD1-202ENST00000396629 HAUS6Q7Z4H7 955 aa9.24□□□□□ -0.93
SCFD1-202ENST00000396629 APPL2Q8NEU8 664 aa9.24□□□□□ -0.93
SCFD1-202ENST00000396629 TTC8Q8TAM2 541 aa9.24□□□□□ -0.93
SCFD1-202ENST00000396629 DDX12PQ92771 950 aa9.24□□□□□ -0.93
SCFD1-202ENST00000396629 GATA6Q92908 595 aa9.24□□□□□ -0.93
SCFD1-202ENST00000396629 ZFYVE19Q96K21 471 aa9.24□□□□□ -0.93
SCFD1-202ENST00000396629 NACC1Q96RE7 527 aa9.24□□□□□ -0.93
SCFD1-202ENST00000396629 CCDC94Q9BW85 323 aaPredicted RBP9.24□□□□□ -0.93
SCFD1-202ENST00000396629 TOPORSQ9NS56 1045 aaPredicted RBP9.24□□□□□ -0.93
SCFD1-202ENST00000396629 ZZEF1O43149 2961 aa9.24□□□□□ -0.93
SCFD1-202ENST00000396629 MYO16Q9Y6X6 1858 aa9.24□□□□□ -0.93
SCFD1-202ENST00000396629 SRRM3A6NNA2 597 aaPredicted RBP9.24□□□□□ -0.93
SCFD1-202ENST00000396629 MED24O75448 989 aa9.24□□□□□ -0.93
SCFD1-202ENST00000396629 TXKP42681 527 aa9.24□□□□□ -0.93
SCFD1-202ENST00000396629 YARSP54577 528 aaKnown RBP9.24□□□□□ -0.93
SCFD1-202ENST00000396629 PLCB2Q00722 1185 aa9.24□□□□□ -0.93
SCFD1-202ENST00000396629 ZNF252P-AS1Q0IIN9 211 aa9.24□□□□□ -0.93
SCFD1-202ENST00000396629 FOXC1Q12948 553 aa9.24□□□□□ -0.93
SCFD1-202ENST00000396629 STK3Q13188 491 aa9.24□□□□□ -0.93
SCFD1-202ENST00000396629 STXBP5Q5T5C0 1151 aa9.24□□□□□ -0.93
SCFD1-202ENST00000396629 PADI6Q6TGC4 694 aa9.24□□□□□ -0.93
SCFD1-202ENST00000396629 CATSPER3Q86XQ3 398 aa9.24□□□□□ -0.93
SCFD1-202ENST00000396629 CAMKK1Q8N5S9 505 aa9.24□□□□□ -0.93
SCFD1-202ENST00000396629 CEP120Q8N960 986 aa9.24□□□□□ -0.93
SCFD1-202ENST00000396629 TMEM209Q96SK2 561 aa9.24□□□□□ -0.93
SCFD1-202ENST00000396629 LARP6Q9BRS8 491 aaKnown RBP9.24□□□□□ -0.93
SCFD1-202ENST00000396629 POLR3CQ9BUI4 534 aaPredicted RBP9.24□□□□□ -0.93
SCFD1-202ENST00000396629 EDEM2Q9BV94 578 aa9.24□□□□□ -0.93
SCFD1-202ENST00000396629 ADAM33Q9BZ11 813 aa9.24□□□□□ -0.93
SCFD1-202ENST00000396629 DUSP15Q9H1R2 295 aaPredicted RBP9.24□□□□□ -0.93
SCFD1-202ENST00000396629 CDT1Q9H211 546 aa9.24□□□□□ -0.93
SCFD1-202ENST00000396629 PTPRHQ9HD43 1115 aa9.24□□□□□ -0.93
SCFD1-202ENST00000396629 TPCN1Q9ULQ1 816 aa9.24□□□□□ -0.93
SCFD1-202ENST00000396629 PCDHB8Q9UN66 801 aa9.24□□□□□ -0.93
SCFD1-202ENST00000396629 NUB1Q9Y5A7 615 aa9.24□□□□□ -0.93
SCFD1-202ENST00000396629 ZNF638Q14966 1978 aaKnown RBP9.23□□□□□ -0.93
SCFD1-202ENST00000396629 C4orf47A7E2U8 309 aa9.23□□□□□ -0.93
SCFD1-202ENST00000396629 SOBPA7XYQ1 873 aa9.23□□□□□ -0.93
SCFD1-202ENST00000396629 ATG13O75143 517 aa9.23□□□□□ -0.93
SCFD1-202ENST00000396629 CDKL5O76039 1030 aa9.23□□□□□ -0.93
SCFD1-202ENST00000396629 CPB1P15086 417 aa9.23□□□□□ -0.93
SCFD1-202ENST00000396629 NR5A1Q13285 461 aa9.23□□□□□ -0.93
SCFD1-202ENST00000396629 TMEM196Q5HYL7 178 aa9.23□□□□□ -0.93
SCFD1-202ENST00000396629 TCEAL6Q6IPX3 200 aa9.23□□□□□ -0.93
SCFD1-202ENST00000396629 LRSAM1Q6UWE0 723 aa9.23□□□□□ -0.93
SCFD1-202ENST00000396629 GAREM2Q75VX8 874 aa9.23□□□□□ -0.93
SCFD1-202ENST00000396629 GPIHBP1Q8IV16 184 aa9.23□□□□□ -0.93
SCFD1-202ENST00000396629 TCEAL3Q969E4 200 aa9.23□□□□□ -0.93
SCFD1-202ENST00000396629 C18orf25Q96B23 403 aaPredicted RBP9.23□□□□□ -0.93
SCFD1-202ENST00000396629 TBC1D32Q96NH3 1257 aa9.23□□□□□ -0.93
SCFD1-202ENST00000396629 ACO2Q99798 780 aaKnown RBP9.23□□□□□ -0.93
SCFD1-202ENST00000396629 KIFC3Q9BVG8 833 aa9.23□□□□□ -0.93
SCFD1-202ENST00000396629 OXCT2Q9BYC2 517 aaPredicted RBP9.23□□□□□ -0.93
SCFD1-202ENST00000396629 CRISPLD1Q9H336 500 aa9.23□□□□□ -0.93
SCFD1-202ENST00000396629 CNTN3Q9P232 1028 aa9.23□□□□□ -0.93
SCFD1-202ENST00000396629 SLC8A2Q9UPR5 921 aa9.23□□□□□ -0.93
SCFD1-202ENST00000396629 ASB3Q9Y575 518 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms