RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 CSGALNACT1Q8TDX6 532 aa19.11■□□□□ 0.65
EXOSC3-202ENST00000396521 DDX12PQ92771 950 aa19.11■□□□□ 0.65
EXOSC3-202ENST00000396521 CEP72Q9P209 647 aa19.11■□□□□ 0.65
EXOSC3-202ENST00000396521 ASB3Q9Y575 518 aa19.11■□□□□ 0.65
EXOSC3-202ENST00000396521 H0YCG3 227 aa19.1■□□□□ 0.65
EXOSC3-202ENST00000396521 ABLIM1O14639 778 aa19.1■□□□□ 0.65
EXOSC3-202ENST00000396521 CHADO15335 359 aa19.1■□□□□ 0.65
EXOSC3-202ENST00000396521 CLDN3O15551 220 aa19.1■□□□□ 0.65
EXOSC3-202ENST00000396521 HIP1RO75146 1068 aa19.1■□□□□ 0.65
EXOSC3-202ENST00000396521 MYL4P12829 197 aa19.1■□□□□ 0.65
EXOSC3-202ENST00000396521 CYP3A5P20815 502 aa19.1■□□□□ 0.65
EXOSC3-202ENST00000396521 GUCY2CP25092 1073 aa19.1■□□□□ 0.65
EXOSC3-202ENST00000396521 USP37Q86T82 979 aa19.1■□□□□ 0.65
EXOSC3-202ENST00000396521 DAW1Q8N136 415 aa19.1■□□□□ 0.65
EXOSC3-202ENST00000396521 SLITRK6Q9H5Y7 841 aa19.1■□□□□ 0.65
EXOSC3-202ENST00000396521 POLD4Q9HCU8 107 aa19.1■□□□□ 0.65
EXOSC3-202ENST00000396521 KCND2Q9NZV8 630 aa19.1■□□□□ 0.65
EXOSC3-202ENST00000396521 PATJQ8NI35 1801 aa19.09■□□□□ 0.65
EXOSC3-202ENST00000396521 OR6C75A6NL08 312 aa19.09■□□□□ 0.65
EXOSC3-202ENST00000396521 M0QZQ0 153 aa19.09■□□□□ 0.65
EXOSC3-202ENST00000396521 XPOTO43592 962 aaKnown RBP19.09■□□□□ 0.65
EXOSC3-202ENST00000396521 CLTAP09496 248 aa19.09■□□□□ 0.65
EXOSC3-202ENST00000396521 CHRNB1P11230 501 aa19.09■□□□□ 0.65
EXOSC3-202ENST00000396521 PRPHP41219 470 aa19.09■□□□□ 0.65
EXOSC3-202ENST00000396521 ALDH1A3P47895 512 aa19.09■□□□□ 0.65
EXOSC3-202ENST00000396521 EPHB3P54753 998 aa19.09■□□□□ 0.65
EXOSC3-202ENST00000396521 FCHO2Q0JRZ9 810 aa19.09■□□□□ 0.65
EXOSC3-202ENST00000396521 NOLC1Q14978 699 aaKnown RBP eCLIP19.09■□□□□ 0.65
EXOSC3-202ENST00000396521 SLC10A6Q3KNW5 377 aa19.09■□□□□ 0.65
EXOSC3-202ENST00000396521 DGKKQ5KSL6 1271 aa19.09■□□□□ 0.65
EXOSC3-202ENST00000396521 RINT1Q6NUQ1 792 aa19.09■□□□□ 0.65
EXOSC3-202ENST00000396521 C1orf186Q6ZWK4 172 aa19.09■□□□□ 0.65
EXOSC3-202ENST00000396521 TAS1R3Q7RTX0 852 aa19.09■□□□□ 0.65
EXOSC3-202ENST00000396521 DDX1Q92499 740 aaKnown RBP19.09■□□□□ 0.65
EXOSC3-202ENST00000396521 C18orf25Q96B23 403 aaPredicted RBP19.09■□□□□ 0.65
EXOSC3-202ENST00000396521 ZSWIM3Q96MP5 696 aa19.09■□□□□ 0.65
EXOSC3-202ENST00000396521 HSFX1Q9UBD0 423 aa19.09■□□□□ 0.65
EXOSC3-202ENST00000396521 HEPACAM2A8MVW5 462 aa19.08■□□□□ 0.64
EXOSC3-202ENST00000396521 ARNTLO00327 626 aa19.08■□□□□ 0.64
EXOSC3-202ENST00000396521 MOSPD3O75425 235 aa19.08■□□□□ 0.64
EXOSC3-202ENST00000396521 U2AF2P26368 475 aaKnown RBP eCLIP19.08■□□□□ 0.645e-10■■■■■ 27.4
EXOSC3-202ENST00000396521 LRPAP1P30533 357 aa19.08■□□□□ 0.64
EXOSC3-202ENST00000396521 HOXA6P31267 233 aa19.08■□□□□ 0.64
EXOSC3-202ENST00000396521 MCL1Q07820 350 aa19.08■□□□□ 0.64
EXOSC3-202ENST00000396521 PTGDRQ13258 359 aa19.08■□□□□ 0.64
EXOSC3-202ENST00000396521 GPR17Q13304 367 aa19.08■□□□□ 0.64
EXOSC3-202ENST00000396521 RNF19BQ6ZMZ0 732 aa19.08■□□□□ 0.64
EXOSC3-202ENST00000396521 HAUS6Q7Z4H7 955 aa19.08■□□□□ 0.64
EXOSC3-202ENST00000396521 RALGPS2Q86X27 583 aaPredicted RBP19.08■□□□□ 0.64
EXOSC3-202ENST00000396521 HS6ST3Q8IZP7 471 aa19.08■□□□□ 0.64
EXOSC3-202ENST00000396521 SYNPOQ8N3V7 929 aa19.08■□□□□ 0.64
EXOSC3-202ENST00000396521 FAM184AQ8NB25 1140 aa19.08■□□□□ 0.64
EXOSC3-202ENST00000396521 OBP2AQ9NY56 170 aa19.08■□□□□ 0.64
EXOSC3-202ENST00000396521 ZMYM5Q9UJ78 669 aa19.08■□□□□ 0.64
EXOSC3-202ENST00000396521 SLC30A4O14863 429 aa19.07■□□□□ 0.64
EXOSC3-202ENST00000396521 PLS3P13797 630 aa19.07■□□□□ 0.64
EXOSC3-202ENST00000396521 CCNE1P24864 410 aa19.07■□□□□ 0.64
EXOSC3-202ENST00000396521 VIPR2P41587 438 aa19.07■□□□□ 0.64
EXOSC3-202ENST00000396521 AARSP49588 968 aaKnown RBP eCLIP19.07■□□□□ 0.64
EXOSC3-202ENST00000396521 KPNA1P52294 538 aaPredicted RBP19.07■□□□□ 0.64
EXOSC3-202ENST00000396521 MAPK7Q13164 816 aa19.07■□□□□ 0.64
EXOSC3-202ENST00000396521 SIM2Q14190 667 aaPredicted RBP19.07■□□□□ 0.64
EXOSC3-202ENST00000396521 MYBPC2Q14324 1141 aa19.07■□□□□ 0.64
EXOSC3-202ENST00000396521 TEAD2Q15562 447 aa19.07■□□□□ 0.64
EXOSC3-202ENST00000396521 CSRP2Q16527 193 aa19.07■□□□□ 0.64
EXOSC3-202ENST00000396521 DTHD1Q6ZMT9 781 aa19.07■□□□□ 0.64
EXOSC3-202ENST00000396521 LONP2Q86WA8 852 aa19.07■□□□□ 0.64
EXOSC3-202ENST00000396521 FAM200AQ8TCP9 573 aa19.07■□□□□ 0.64
EXOSC3-202ENST00000396521 KCNN1Q92952 543 aa19.07■□□□□ 0.64
EXOSC3-202ENST00000396521 ZSCAN31Q96LW9 406 aaPredicted RBP19.07■□□□□ 0.64
EXOSC3-202ENST00000396521 CNTNAP3BQ96NU0 1288 aa19.07■□□□□ 0.64
EXOSC3-202ENST00000396521 CNTNAP3Q9BZ76 1288 aa19.07■□□□□ 0.64
EXOSC3-202ENST00000396521 UBQLN1Q9UMX0 589 aaKnown RBP19.07■□□□□ 0.64
EXOSC3-202ENST00000396521 YIPF1Q9Y548 306 aa19.07■□□□□ 0.64
EXOSC3-202ENST00000396521 E9PMD0 336 aa19.06■□□□□ 0.64
EXOSC3-202ENST00000396521 SLC16A4O15374 487 aa19.06■□□□□ 0.64
EXOSC3-202ENST00000396521 WEE1P30291 646 aa19.06■□□□□ 0.64
EXOSC3-202ENST00000396521 PLCB2Q00722 1185 aa19.06■□□□□ 0.64
EXOSC3-202ENST00000396521 SPEM2Q0P670 501 aa19.06■□□□□ 0.64
EXOSC3-202ENST00000396521 ZBTB6Q15916 424 aa19.06■□□□□ 0.64
EXOSC3-202ENST00000396521 ARHGAP29Q52LW3 1261 aa19.06■□□□□ 0.64
EXOSC3-202ENST00000396521 ITIH5Q86UX2 942 aa19.06■□□□□ 0.64
EXOSC3-202ENST00000396521 TMEM161BQ8NDZ6 487 aa19.06■□□□□ 0.64
EXOSC3-202ENST00000396521 SHKBP1Q8TBC3 707 aa19.06■□□□□ 0.64
EXOSC3-202ENST00000396521 RUSC1Q9BVN2 902 aa19.06■□□□□ 0.64
EXOSC3-202ENST00000396521 PARD6AQ9NPB6 346 aa19.06■□□□□ 0.64
EXOSC3-202ENST00000396521 LARSQ9P2J5 1176 aaKnown RBP19.06■□□□□ 0.64
EXOSC3-202ENST00000396521 ANKFY1Q9P2R3 1169 aa19.06■□□□□ 0.64
EXOSC3-202ENST00000396521 TTC26A0AVF1 554 aa19.05■□□□□ 0.64
EXOSC3-202ENST00000396521 MYBPHLA2RUH7 354 aa19.05■□□□□ 0.64
EXOSC3-202ENST00000396521 DPYSL4O14531 572 aa19.05■□□□□ 0.64
EXOSC3-202ENST00000396521 ADRB1P08588 477 aa19.05■□□□□ 0.64
EXOSC3-202ENST00000396521 MAPTP10636 758 aaKnown RBP19.05■□□□□ 0.64
EXOSC3-202ENST00000396521 HARSP12081 509 aaKnown RBP19.05■□□□□ 0.64
EXOSC3-202ENST00000396521 TYMPP19971 482 aa19.05■□□□□ 0.64
EXOSC3-202ENST00000396521 ST3GAL1Q11201 340 aa19.05■□□□□ 0.64
EXOSC3-202ENST00000396521 PTPAQ15257 358 aa19.05■□□□□ 0.64
EXOSC3-202ENST00000396521 ARHGAP15Q53QZ3 475 aa19.05■□□□□ 0.64
EXOSC3-202ENST00000396521 ARMCX5Q6P1M9 558 aa19.05■□□□□ 0.64
EXOSC3-202ENST00000396521 PRR23BQ6ZRT6 265 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms