RNA–Protein interactions for RNA: ENST00000396389.5

TUBB-208, Transcript of tubulin beta class I, humanhuman

TSL 5 BASIC

Gene TUBB, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-208ENST00000396389 ODR4Q5SWX8 454 aa10.96□□□□□ -0.66
TUBB-208ENST00000396389 ANKRD20A1Q5TYW2 823 aa10.96□□□□□ -0.66
TUBB-208ENST00000396389 ANKRD20A3Q5VUR7 823 aa10.96□□□□□ -0.66
TUBB-208ENST00000396389 AP1ARQ63HQ0 302 aa10.96□□□□□ -0.66
TUBB-208ENST00000396389 RHPN2Q8IUC4 686 aa10.96□□□□□ -0.66
TUBB-208ENST00000396389 SLAIN1Q8ND83 568 aa10.96□□□□□ -0.66
TUBB-208ENST00000396389 ATP8B4Q8TF62 1192 aa10.96□□□□□ -0.66
TUBB-208ENST00000396389 SMARCAD1Q9H4L7 1026 aa10.96□□□□□ -0.66
TUBB-208ENST00000396389 RBBP6Q7Z6E9 1792 aaKnown RBP10.96□□□□□ -0.66
TUBB-208ENST00000396389 TISP43B9A030 160 aa10.95□□□□□ -0.66
TUBB-208ENST00000396389 DUSP11O75319 330 aaKnown RBP10.95□□□□□ -0.66
TUBB-208ENST00000396389 FAM13AO94988 1023 aa10.95□□□□□ -0.66
TUBB-208ENST00000396389 IRF5Q13568 498 aa10.95□□□□□ -0.66
TUBB-208ENST00000396389 SYT2Q8N9I0 419 aaPredicted RBP10.95□□□□□ -0.66
TUBB-208ENST00000396389 LRRC57Q8N9N7 239 aa10.95□□□□□ -0.66
TUBB-208ENST00000396389 GDAP1Q8TB36 358 aa10.95□□□□□ -0.66
TUBB-208ENST00000396389 FBXO25Q8TCJ0 367 aa10.95□□□□□ -0.66
TUBB-208ENST00000396389 DIS3LQ8TF46 1054 aaKnown RBP10.95□□□□□ -0.66
TUBB-208ENST00000396389 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.95□□□□□ -0.661e-6■■□□□ 14.2
TUBB-208ENST00000396389 UTP11Q9Y3A2 253 aaKnown RBP10.95□□□□□ -0.66
TUBB-208ENST00000396389 A6NJR5 290 aa10.95□□□□□ -0.66
TUBB-208ENST00000396389 TCP11X1B4DZS4 312 aa10.95□□□□□ -0.66
TUBB-208ENST00000396389 SLC16A4O15374 487 aa10.95□□□□□ -0.66
TUBB-208ENST00000396389 RGS16O15492 202 aaPredicted RBP10.95□□□□□ -0.66
TUBB-208ENST00000396389 TREHO43280 583 aa10.95□□□□□ -0.66
TUBB-208ENST00000396389 CPT1AP50416 773 aa10.95□□□□□ -0.66
TUBB-208ENST00000396389 GIT2Q14161 759 aa10.95□□□□□ -0.66
TUBB-208ENST00000396389 XKR3Q5GH77 459 aa10.95□□□□□ -0.66
TUBB-208ENST00000396389 ALKBH5Q6P6C2 394 aaKnown RBP10.95□□□□□ -0.66
TUBB-208ENST00000396389 CTU1Q7Z7A3 348 aaKnown RBP10.95□□□□□ -0.66
TUBB-208ENST00000396389 C4orf19Q8IY42 314 aa10.95□□□□□ -0.66
TUBB-208ENST00000396389 C7orf31Q8N865 590 aa10.95□□□□□ -0.66
TUBB-208ENST00000396389 ANKRD42Q8N9B4 389 aa10.95□□□□□ -0.66
TUBB-208ENST00000396389 TPCN2Q8NHX9 752 aa10.95□□□□□ -0.66
TUBB-208ENST00000396389 SLC7A3Q8WY07 619 aa10.95□□□□□ -0.66
TUBB-208ENST00000396389 BSNDQ8WZ55 320 aa10.95□□□□□ -0.66
TUBB-208ENST00000396389 TRMT13Q9NUP7 481 aaKnown RBP10.95□□□□□ -0.66
TUBB-208ENST00000396389 ADAM22Q9P0K1 906 aa10.95□□□□□ -0.66
TUBB-208ENST00000396389 CHORDC1Q9UHD1 332 aaPredicted RBP10.95□□□□□ -0.66
TUBB-208ENST00000396389 AKT3Q9Y243 479 aa10.95□□□□□ -0.66
TUBB-208ENST00000396389 COL4A3BPQ9Y5P4 624 aa10.95□□□□□ -0.66
TUBB-208ENST00000396389 DPPA5A6NC42 116 aa10.95□□□□□ -0.66
TUBB-208ENST00000396389 LRRIQ4A6NIV6 560 aa10.95□□□□□ -0.66
TUBB-208ENST00000396389 STBD1O95210 358 aa10.95□□□□□ -0.66
TUBB-208ENST00000396389 GCNT3O95395 438 aa10.95□□□□□ -0.66
TUBB-208ENST00000396389 MYL1P05976 194 aa10.95□□□□□ -0.66
TUBB-208ENST00000396389 ABCB4P21439 1286 aa10.95□□□□□ -0.66
TUBB-208ENST00000396389 PURAQ00577 322 aaKnown RBP10.95□□□□□ -0.66
TUBB-208ENST00000396389 MTMR3Q13615 1198 aa10.95□□□□□ -0.66
TUBB-208ENST00000396389 MFSD10Q14728 455 aa10.95□□□□□ -0.66
TUBB-208ENST00000396389 BRDTQ58F21 947 aaPredicted RBP10.95□□□□□ -0.66
TUBB-208ENST00000396389 LHX8Q68G74 356 aa10.95□□□□□ -0.66
TUBB-208ENST00000396389 ACTRT1Q8TDG2 376 aa10.95□□□□□ -0.66
TUBB-208ENST00000396389 DNAJC19Q96DA6 116 aa10.95□□□□□ -0.66
TUBB-208ENST00000396389 SENP6Q9GZR1 1112 aaPredicted RBP10.95□□□□□ -0.66
TUBB-208ENST00000396389 STK17AQ9UEE5 414 aa10.95□□□□□ -0.66
TUBB-208ENST00000396389 AJAP1Q9UKB5 411 aaPredicted RBP10.95□□□□□ -0.66
TUBB-208ENST00000396389 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.95□□□□□ -0.66
TUBB-208ENST00000396389 IGSF9BQ9UPX0 1349 aa10.94□□□□□ -0.66
TUBB-208ENST00000396389 RBM47A0AV96 593 aaKnown RBP10.94□□□□□ -0.66
TUBB-208ENST00000396389 ATG7O95352 703 aa10.94□□□□□ -0.66
TUBB-208ENST00000396389 SMIM10L2AP0DMW4 78 aa10.94□□□□□ -0.66
TUBB-208ENST00000396389 SMIM10L2BP0DMW5 78 aa10.94□□□□□ -0.66
TUBB-208ENST00000396389 MMP13P45452 471 aa10.94□□□□□ -0.66
TUBB-208ENST00000396389 AMPD3Q01432 767 aa10.94□□□□□ -0.66
TUBB-208ENST00000396389 COASYQ13057 564 aa10.94□□□□□ -0.66
TUBB-208ENST00000396389 EMC2Q15006 297 aa10.94□□□□□ -0.66
TUBB-208ENST00000396389 TAF11Q15544 211 aa10.94□□□□□ -0.66
TUBB-208ENST00000396389 EFCAB12Q6NXP0 572 aa10.94□□□□□ -0.66
TUBB-208ENST00000396389 CRELD2Q6UXH1 353 aaPredicted RBP10.94□□□□□ -0.66
TUBB-208ENST00000396389 C1orf186Q6ZWK4 172 aa10.94□□□□□ -0.66
TUBB-208ENST00000396389 CCDC25Q86WR0 208 aa10.94□□□□□ -0.66
TUBB-208ENST00000396389 DAW1Q8N136 415 aa10.94□□□□□ -0.66
TUBB-208ENST00000396389 FITM2Q8N6M3 262 aa10.94□□□□□ -0.66
TUBB-208ENST00000396389 ATL2Q8NHH9 583 aa10.94□□□□□ -0.66
TUBB-208ENST00000396389 PXYLP1Q8TE99 480 aa10.94□□□□□ -0.66
TUBB-208ENST00000396389 DYDC1Q8WWB3 177 aa10.94□□□□□ -0.66
TUBB-208ENST00000396389 SH3GL3Q99963 347 aa10.94□□□□□ -0.66
TUBB-208ENST00000396389 OSBPL1AQ9BXW6 950 aa10.94□□□□□ -0.66
TUBB-208ENST00000396389 POLR3FQ9H1D9 316 aaPredicted RBP10.94□□□□□ -0.66
TUBB-208ENST00000396389 XPNPEP1Q9NQW7 623 aa10.94□□□□□ -0.66
TUBB-208ENST00000396389 NRBP2Q9NSY0 501 aa10.94□□□□□ -0.66
TUBB-208ENST00000396389 ZBTB42B2RXF5 422 aa10.94□□□□□ -0.66
TUBB-208ENST00000396389 H0Y3Z8 333 aa10.94□□□□□ -0.66
TUBB-208ENST00000396389 ASAP2O43150 1006 aa10.94□□□□□ -0.66
TUBB-208ENST00000396389 SNX3O60493 162 aa10.94□□□□□ -0.66
TUBB-208ENST00000396389 ADAMTS4O75173 837 aa10.94□□□□□ -0.66
TUBB-208ENST00000396389 HARSP12081 509 aaKnown RBP10.94□□□□□ -0.66
TUBB-208ENST00000396389 PMS2P54278 862 aa10.94□□□□□ -0.66
TUBB-208ENST00000396389 GRIK4Q16099 956 aa10.94□□□□□ -0.66
TUBB-208ENST00000396389 KIZQ2M2Z5 673 aa10.94□□□□□ -0.66
TUBB-208ENST00000396389 MAP3K21Q5TCX8 1036 aa10.94□□□□□ -0.66
TUBB-208ENST00000396389 UNC13DQ70J99 1090 aa10.94□□□□□ -0.66
TUBB-208ENST00000396389 IRF2BP2Q7Z5L9 587 aa10.94□□□□□ -0.66
TUBB-208ENST00000396389 GUF1Q8N442 669 aaKnown RBP10.94□□□□□ -0.66
TUBB-208ENST00000396389 CCDC26Q8TAB7 109 aa10.94□□□□□ -0.66
TUBB-208ENST00000396389 PBKQ96KB5 322 aa10.94□□□□□ -0.66
TUBB-208ENST00000396389 RMDN2Q96LZ7 410 aa10.94□□□□□ -0.66
TUBB-208ENST00000396389 LUC7LQ9NQ29 371 aaKnown RBP10.94□□□□□ -0.66
TUBB-208ENST00000396389 BATF3Q9NR55 127 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms