RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 EPC2Q52LR7 807 aa6.52□□□□□ -1.37
AP3S1-202ENST00000395548 SOWAHCQ53LP3 525 aaPredicted RBP6.52□□□□□ -1.37
AP3S1-202ENST00000395548 ANKS3Q6ZW76 656 aa6.52□□□□□ -1.37
AP3S1-202ENST00000395548 KYQ8NBH2 561 aa6.52□□□□□ -1.37
AP3S1-202ENST00000395548 SMRP1Q8NCR6 262 aa6.52□□□□□ -1.37
AP3S1-202ENST00000395548 WDR66Q8TBY9 1149 aa6.52□□□□□ -1.37
AP3S1-202ENST00000395548 KCTD13Q8WZ19 329 aa6.52□□□□□ -1.37
AP3S1-202ENST00000395548 MKL1Q969V6 931 aa6.52□□□□□ -1.37
AP3S1-202ENST00000395548 CCDC136Q96JN2 1154 aa6.52□□□□□ -1.37
AP3S1-202ENST00000395548 C17orf80Q9BSJ5 609 aa6.52□□□□□ -1.37
AP3S1-202ENST00000395548 YIPF4Q9BSR8 244 aa6.52□□□□□ -1.37
AP3S1-202ENST00000395548 SLKQ9H2G2 1235 aaPredicted RBP6.52□□□□□ -1.37
AP3S1-202ENST00000395548 CNNM1Q9NRU3 951 aa6.52□□□□□ -1.37
AP3S1-202ENST00000395548 DDX56Q9NY93 547 aaKnown RBP6.52□□□□□ -1.37
AP3S1-202ENST00000395548 BTBD7Q9P203 1132 aa6.52□□□□□ -1.37
AP3S1-202ENST00000395548 USP18Q9UMW8 372 aa6.52□□□□□ -1.37
AP3S1-202ENST00000395548 G3BP2Q9UN86 482 aaKnown RBP6.52□□□□□ -1.37
AP3S1-202ENST00000395548 PRKAB1Q9Y478 270 aa6.52□□□□□ -1.37
AP3S1-202ENST00000395548 PCDHA2Q9Y5H9 948 aa6.52□□□□□ -1.37
AP3S1-202ENST00000395548 DOCK2Q92608 1830 aa6.52□□□□□ -1.37
AP3S1-202ENST00000395548 SMCHD1A6NHR9 2005 aa6.52□□□□□ -1.37
AP3S1-202ENST00000395548 MYH3P11055 1940 aa6.51□□□□□ -1.37
AP3S1-202ENST00000395548 ADAMTS20P59510 1910 aa6.51□□□□□ -1.37
AP3S1-202ENST00000395548 HMGB1P1B2RPK0 211 aaPredicted RBP6.51□□□□□ -1.37
AP3S1-202ENST00000395548 HGSO14964 777 aaPredicted RBP6.51□□□□□ -1.37
AP3S1-202ENST00000395548 ZEB2O60315 1214 aa6.51□□□□□ -1.37
AP3S1-202ENST00000395548 TBX10O75333 385 aa6.51□□□□□ -1.37
AP3S1-202ENST00000395548 RRP1P56182 461 aaKnown RBP6.51□□□□□ -1.37
AP3S1-202ENST00000395548 PPP2R2AP63151 447 aa6.51□□□□□ -1.37
AP3S1-202ENST00000395548 HYAL1Q12794 435 aa6.51□□□□□ -1.37
AP3S1-202ENST00000395548 MAP4K2Q12851 820 aa6.51□□□□□ -1.37
AP3S1-202ENST00000395548 COASYQ13057 564 aa6.51□□□□□ -1.37
AP3S1-202ENST00000395548 ADAM15Q13444 863 aa6.51□□□□□ -1.37
AP3S1-202ENST00000395548 UBXN11Q5T124 520 aa6.51□□□□□ -1.37
AP3S1-202ENST00000395548 LDHAL6AQ6ZMR3 332 aa6.51□□□□□ -1.37
AP3S1-202ENST00000395548 CATSPERGQ6ZRH7 1159 aa6.51□□□□□ -1.37
AP3S1-202ENST00000395548 MSL3Q8N5Y2 521 aaKnown RBP6.51□□□□□ -1.37
AP3S1-202ENST00000395548 SUMF1Q8NBK3 374 aa6.51□□□□□ -1.37
AP3S1-202ENST00000395548 HNRNPLLQ8WVV9 542 aaKnown RBP6.51□□□□□ -1.37
AP3S1-202ENST00000395548 MSLNLQ96KJ4 702 aa6.51□□□□□ -1.37
AP3S1-202ENST00000395548 GORASP1Q9BQQ3 440 aa6.51□□□□□ -1.37
AP3S1-202ENST00000395548 C11orf84Q9BUA3 381 aaPredicted RBP6.51□□□□□ -1.37
AP3S1-202ENST00000395548 MOV10L1Q9BXT6 1211 aaKnown RBP6.51□□□□□ -1.37
AP3S1-202ENST00000395548 LMAN2LQ9H0V9 348 aa6.51□□□□□ -1.37
AP3S1-202ENST00000395548 UPF3AQ9H1J1 476 aaKnown RBP6.51□□□□□ -1.37
AP3S1-202ENST00000395548 TMX1Q9H3N1 280 aa6.51□□□□□ -1.37
AP3S1-202ENST00000395548 ST7Q9NRC1 585 aa6.51□□□□□ -1.37
AP3S1-202ENST00000395548 HERC5Q9UII4 1024 aaKnown RBP6.51□□□□□ -1.37
AP3S1-202ENST00000395548 SMG1Q96Q15 3661 aaKnown RBP6.5□□□□□ -1.37
AP3S1-202ENST00000395548 A0A1W2PQU0 124 aa6.5□□□□□ -1.37
AP3S1-202ENST00000395548 MYADML2A6NDP7 307 aa6.5□□□□□ -1.37
AP3S1-202ENST00000395548 NOBOXO60393 691 aa6.5□□□□□ -1.37
AP3S1-202ENST00000395548 DGKIO75912 1065 aa6.5□□□□□ -1.37
AP3S1-202ENST00000395548 CAPNS1P04632 268 aa6.5□□□□□ -1.37
AP3S1-202ENST00000395548 USP14P54578 494 aa6.5□□□□□ -1.37
AP3S1-202ENST00000395548 NKX3-2P78367 333 aa6.5□□□□□ -1.37
AP3S1-202ENST00000395548 GCKRQ14397 625 aa6.5□□□□□ -1.37
AP3S1-202ENST00000395548 HSP90AA2PQ14568 343 aaPredicted RBP6.5□□□□□ -1.37
AP3S1-202ENST00000395548 DDR2Q16832 855 aa6.5□□□□□ -1.37
AP3S1-202ENST00000395548 SLC35F1Q5T1Q4 408 aa6.5□□□□□ -1.37
AP3S1-202ENST00000395548 UBE3BQ7Z3V4 1068 aa6.5□□□□□ -1.37
AP3S1-202ENST00000395548 C1orf159Q96HA4 380 aa6.5□□□□□ -1.37
AP3S1-202ENST00000395548 SGSM3Q96HU1 749 aa6.5□□□□□ -1.37
AP3S1-202ENST00000395548 C12orf42Q96LP6 360 aa6.5□□□□□ -1.37
AP3S1-202ENST00000395548 SPATC1LQ9H0A9 340 aa6.5□□□□□ -1.37
AP3S1-202ENST00000395548 INCENPQ9NQS7 918 aa6.5□□□□□ -1.37
AP3S1-202ENST00000395548 HOXC10Q9NYD6 342 aa6.5□□□□□ -1.37
AP3S1-202ENST00000395548 GABBR1Q9UBS5 961 aa6.5□□□□□ -1.37
AP3S1-202ENST00000395548 NR2E1Q9Y466 385 aa6.5□□□□□ -1.37
AP3S1-202ENST00000395548 USP15Q9Y4E8 981 aaPredicted RBP6.5□□□□□ -1.37
AP3S1-202ENST00000395548 NPFFR2Q9Y5X5 522 aa6.5□□□□□ -1.37
AP3S1-202ENST00000395548 SIP14410 1827 aa6.5□□□□□ -1.37
AP3S1-202ENST00000395548 RALGAPA2Q2PPJ7 1873 aa6.49□□□□□ -1.37
AP3S1-202ENST00000395548 ABHD14A-ACY1A0A1B0GW23 586 aa6.49□□□□□ -1.37
AP3S1-202ENST00000395548 MAFKO60675 156 aa6.49□□□□□ -1.37
AP3S1-202ENST00000395548 IQCF3P0C7M6 154 aa6.49□□□□□ -1.37
AP3S1-202ENST00000395548 RPL13P26373 211 aaKnown RBP6.49□□□□□ -1.37
AP3S1-202ENST00000395548 THBS2P35442 1172 aa6.49□□□□□ -1.37
AP3S1-202ENST00000395548 PLP2Q04941 152 aa6.49□□□□□ -1.37
AP3S1-202ENST00000395548 PICALMQ13492 652 aa6.49□□□□□ -1.37
AP3S1-202ENST00000395548 BFSP2Q13515 415 aa6.49□□□□□ -1.37
AP3S1-202ENST00000395548 RTP5Q14D33 572 aa6.49□□□□□ -1.37
AP3S1-202ENST00000395548 SKOR2Q2VWA4 1001 aaPredicted RBP6.49□□□□□ -1.37
AP3S1-202ENST00000395548 STEAP3Q658P3 488 aa6.49□□□□□ -1.37
AP3S1-202ENST00000395548 DENND5AQ6IQ26 1287 aa6.49□□□□□ -1.37
AP3S1-202ENST00000395548 CCDC146Q8IYE0 955 aa6.49□□□□□ -1.37
AP3S1-202ENST00000395548 FAM26EQ8N5C1 309 aa6.49□□□□□ -1.37
AP3S1-202ENST00000395548 CELF2-AS1Q8N7Q2 184 aa6.49□□□□□ -1.37
AP3S1-202ENST00000395548 MB21D1Q8N884 522 aa6.49□□□□□ -1.37
AP3S1-202ENST00000395548 PMM1Q92871 262 aa6.49□□□□□ -1.37
AP3S1-202ENST00000395548 KRTAP4-11Q9BYQ6 195 aa6.49□□□□□ -1.37
AP3S1-202ENST00000395548 EPB41L1Q9H4G0 881 aa6.49□□□□□ -1.37
AP3S1-202ENST00000395548 GPR27Q9NS67 375 aa6.49□□□□□ -1.37
AP3S1-202ENST00000395548 ITPR1Q14643 2758 aa6.49□□□□□ -1.37
AP3S1-202ENST00000395548 CDK5RAP2Q96SN8 1893 aa6.49□□□□□ -1.37
AP3S1-202ENST00000395548 COL4A3Q01955 1670 aa6.49□□□□□ -1.37
AP3S1-202ENST00000395548 COL11A1P12107 1806 aaPredicted RBP6.48□□□□□ -1.37
AP3S1-202ENST00000395548 DMXL2Q8TDJ6 3036 aa6.48□□□□□ -1.37
AP3S1-202ENST00000395548 KLF4O43474 513 aa6.48□□□□□ -1.37
AP3S1-202ENST00000395548 PRICKLE3O43900 615 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms