RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 XKR3Q5GH77 459 aa12.33□□□□□ -0.43
UBE2D3-209ENST00000394804 TATDN1Q6P1N9 297 aa12.33□□□□□ -0.43
UBE2D3-209ENST00000394804 PALB2Q86YC2 1186 aa12.33□□□□□ -0.43
UBE2D3-209ENST00000394804 ANKMY2Q8IV38 441 aa12.33□□□□□ -0.43
UBE2D3-209ENST00000394804 MCOLN2Q8IZK6 566 aa12.33□□□□□ -0.43
UBE2D3-209ENST00000394804 TLCD1Q96CP7 247 aa12.33□□□□□ -0.43
UBE2D3-209ENST00000394804 NUDCD1Q96RS6 583 aa12.33□□□□□ -0.43
UBE2D3-209ENST00000394804 ACP6Q9NPH0 428 aa12.33□□□□□ -0.43
UBE2D3-209ENST00000394804 NFIBO00712 420 aa12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 GYG2O15488 501 aa12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 NR3C2P08235 984 aa12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 GARTP22102 1010 aa12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 RAD23BP54727 409 aa12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 NOP14P78316 857 aaKnown RBP12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 ELF3P78545 371 aaPredicted RBP12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 TTLL12Q14166 644 aaPredicted RBP12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 RCN2Q14257 317 aa12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 RRP1BQ14684 758 aaKnown RBP12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 PREPLQ4J6C6 727 aaPredicted RBP12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 TTLL6Q8N841 843 aa12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 SHC3Q92529 594 aa12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 ART4Q93070 314 aa12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 STOML1Q9UBI4 398 aa12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 CYP1A2P05177 515 aa12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 NCOA4Q13772 614 aa12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 ZNF699Q32M78 642 aa12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 RSBN1LQ6PCB5 846 aaPredicted RBP12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 RHPN2Q8IUC4 686 aa12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.33□□□□□ -0.445e-17■□□□□ 9.4
UBE2D3-209ENST00000394804 ADAM33Q9BZ11 813 aa12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 OSBPL7Q9BZF2 842 aa12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 LRRC19Q9H756 370 aa12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 RXFP1Q9HBX9 757 aa12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 AVENQ9NQS1 362 aaPredicted RBP12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 CHST7Q9NS84 486 aa12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 ABCF3Q9NUQ8 709 aa12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 COG5Q9UP83 839 aa12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 NAALADL1Q9UQQ1 740 aa12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 PCDHAC2Q9Y5I4 1007 aa12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 KRT37O76014 449 aa12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 ZWINTO95229 277 aa12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 SKIP12755 728 aa12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 SPP2Q13103 211 aa12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 PTK6Q13882 451 aa12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 NIPA1Q7RTP0 329 aa12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 HSPH1Q92598 858 aa12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 MCEEQ96PE7 176 aa12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 TMEM39BQ9GZU3 492 aa12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 UBN1Q9NPG3 1134 aa12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 ZNF302Q9NR11 478 aa12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 NINJ2Q9NZG7 142 aa12.33□□□□□ -0.44
UBE2D3-209ENST00000394804 DOCK2Q92608 1830 aa12.32□□□□□ -0.44
UBE2D3-209ENST00000394804 CAP2P40123 477 aa12.32□□□□□ -0.44
UBE2D3-209ENST00000394804 ARFIP2P53365 341 aa12.32□□□□□ -0.44
UBE2D3-209ENST00000394804 AP3M2P53677 418 aa12.32□□□□□ -0.44
UBE2D3-209ENST00000394804 FKBP1AP62942 108 aaKnown RBP12.32□□□□□ -0.44
UBE2D3-209ENST00000394804 FMO1Q01740 532 aa12.32□□□□□ -0.44
UBE2D3-209ENST00000394804 PRKCEQ02156 737 aa12.32□□□□□ -0.44
UBE2D3-209ENST00000394804 GCNT1Q02742 428 aa12.32□□□□□ -0.44
UBE2D3-209ENST00000394804 TFDP1Q14186 410 aa12.32□□□□□ -0.44
UBE2D3-209ENST00000394804 PCNX4Q63HM2 1172 aa12.32□□□□□ -0.44
UBE2D3-209ENST00000394804 EXD1Q8NHP7 514 aa12.32□□□□□ -0.44
UBE2D3-209ENST00000394804 MAML1Q92585 1016 aa12.32□□□□□ -0.44
UBE2D3-209ENST00000394804 LENG9Q96B70 501 aa12.32□□□□□ -0.44
UBE2D3-209ENST00000394804 RANBP17Q9H2T7 1088 aaKnown RBP12.32□□□□□ -0.44
UBE2D3-209ENST00000394804 COPEO14579 308 aa12.32□□□□□ -0.44
UBE2D3-209ENST00000394804 ANP32DO95626 131 aa12.32□□□□□ -0.44
UBE2D3-209ENST00000394804 SRGAP2CP0DJJ0 459 aa12.32□□□□□ -0.44
UBE2D3-209ENST00000394804 OSTNP61366 133 aa12.32□□□□□ -0.44
UBE2D3-209ENST00000394804 CUL2Q13617 745 aa12.32□□□□□ -0.44
UBE2D3-209ENST00000394804 TFDP2Q14188 446 aa12.32□□□□□ -0.44
UBE2D3-209ENST00000394804 PIGHQ14442 188 aaPredicted RBP12.32□□□□□ -0.44
UBE2D3-209ENST00000394804 ZNF667Q5HYK9 610 aa12.32□□□□□ -0.44
UBE2D3-209ENST00000394804 STYK1Q6J9G0 422 aa12.32□□□□□ -0.44
UBE2D3-209ENST00000394804 CFAP36Q96G28 342 aa12.32□□□□□ -0.44
UBE2D3-209ENST00000394804 FAM167BQ9BTA0 163 aa12.32□□□□□ -0.44
UBE2D3-209ENST00000394804 RPAP3Q9H6T3 665 aaPredicted RBP12.32□□□□□ -0.44
UBE2D3-209ENST00000394804 ARHGAP42A6NI28 874 aa12.32□□□□□ -0.44
UBE2D3-209ENST00000394804 HNRNPCL1O60812 293 aaKnown RBP12.32□□□□□ -0.44
UBE2D3-209ENST00000394804 NPM3O75607 178 aaKnown RBP12.32□□□□□ -0.44
UBE2D3-209ENST00000394804 BAG2O95816 211 aa12.32□□□□□ -0.44
UBE2D3-209ENST00000394804 PSMC1P62191 440 aaKnown RBP12.32□□□□□ -0.44
UBE2D3-209ENST00000394804 LACTB2Q53H82 288 aaPredicted RBP12.32□□□□□ -0.44
UBE2D3-209ENST00000394804 THNSL1Q8IYQ7 743 aa12.32□□□□□ -0.44
UBE2D3-209ENST00000394804 PPP4R1Q8TF05 950 aa12.32□□□□□ -0.44
UBE2D3-209ENST00000394804 FAF2Q96CS3 445 aa12.32□□□□□ -0.44
UBE2D3-209ENST00000394804 DMAC2Q9NW81 257 aa12.32□□□□□ -0.44
UBE2D3-209ENST00000394804 PCSK1NQ9UHG2 260 aa12.32□□□□□ -0.44
UBE2D3-209ENST00000394804 RGPD3A6NKT7 1758 aaPredicted RBP12.32□□□□□ -0.44
UBE2D3-209ENST00000394804 RGPD4Q7Z3J3 1758 aa12.32□□□□□ -0.44
UBE2D3-209ENST00000394804 IGLV3-22A0A075B6J6 115 aa12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 PRPSAP2O60256 369 aa12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 LPXNO60711 386 aa12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 STAMBPO95630 424 aa12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 ADRB2P07550 413 aa12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 NOVP48745 357 aa12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 GPC3P51654 580 aa12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 GTF2BQ00403 316 aa12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 PRKG1Q13976 671 aa12.31□□□□□ -0.44
UBE2D3-209ENST00000394804 CIAPIN1Q6FI81 312 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms