RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 VPS36Q86VN1 386 aa13.21□□□□□ -0.29
SLC28A1-203ENST00000394573 TMPRSS6Q8IU80 811 aa13.21□□□□□ -0.29
SLC28A1-203ENST00000394573 HELBQ8NG08 1087 aaPredicted RBP13.21□□□□□ -0.29
SLC28A1-203ENST00000394573 NRDE2Q9H7Z3 1164 aa13.21□□□□□ -0.29
SLC28A1-203ENST00000394573 ANLNQ9NQW6 1124 aa13.21□□□□□ -0.29
SLC28A1-203ENST00000394573 RSL24D1Q9UHA3 163 aaKnown RBP13.21□□□□□ -0.29
SLC28A1-203ENST00000394573 PCDHGA8Q9Y5G5 932 aa13.21□□□□□ -0.29
SLC28A1-203ENST00000394573 DDX3YO15523 660 aaKnown RBP13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 SERPINB6P35237 376 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 MYBPC1Q00872 1141 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 CALCOCO2Q13137 446 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 SPIDRQ14159 915 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 XKR5Q6UX68 686 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 ZFPM1Q8IX07 1006 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 ZNF654Q8IZM8 581 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 TTC5Q8N0Z6 440 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 ANKRD35Q8N283 1001 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 ICA1LQ8NDH6 482 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 GABPB2Q8TAK5 448 aaPredicted RBP13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 CCDC110Q8TBZ0 833 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 ZNF75CPQ92670 426 aaPredicted RBP13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 SKA1Q96BD8 255 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 TRIM9Q9C026 710 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 ARHGEF4Q9NR80 690 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 KCNQ5Q9NR82 932 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 OLFML3Q9NRN5 406 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 DDX56Q9NY93 547 aaKnown RBP13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 CHORDC1Q9UHD1 332 aaPredicted RBP13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 PCDHA4Q9UN74 947 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 MYH3P11055 1940 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 A0A087WZG4 1122 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 POC1B-GALNT4F8VUJ3 575 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 SLC26A4O43511 780 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 ZC3H11AO75152 810 aaKnown RBP eCLIP13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 THRAP10827 490 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 DDX5P17844 614 aaKnown RBP13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 LMNB1P20700 586 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 LIFRP42702 1097 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 ZNF200P98182 395 aaPredicted RBP13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 LMNB2Q03252 620 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 PDAP1Q13442 181 aaKnown RBP13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 RASA2Q15283 850 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 NANOGP8Q6NSW7 305 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 FAM20CQ8IXL6 584 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 HPS1Q92902 700 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 CCDC85AQ96PX6 553 aaPredicted RBP13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 NMUR2Q9GZQ4 415 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 ANKRD2Q9GZV1 360 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 KBTBD4Q9NVX7 518 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 SEL1LQ9UBV2 794 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 TTLL3Q9Y4R7 772 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 MYH11P35749 1972 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 ADGRA3Q8IWK6 1321 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 IGSF9BQ9UPX0 1349 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 DISP2A7MBM2 1401 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 GNPATO15228 680 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 ITM2AO43736 263 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 TBC1D12O60347 775 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 HNRNPCL1O60812 293 aaKnown RBP13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 PIAS1O75925 651 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 CSF1RP07333 972 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 H2AFZP0C0S5 128 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 CHRNB1P11230 501 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 KRT15P19012 456 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 HSD17B4P51659 736 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 EPHB1P54762 984 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 PDK4Q16654 411 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 PHKG1Q16816 387 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 RNF19BQ6ZMZ0 732 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 H2AFVQ71UI9 128 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 OSTM1Q86WC4 334 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 ERI1Q8IV48 349 aaKnown RBP13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 XAGE3Q8WTP9 111 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 ART4Q93070 314 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 TMEM120AQ9BXJ8 343 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 GLT8D2Q9H1C3 349 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 S100A14Q9HCY8 104 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 ZDHHC7Q9NXF8 308 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 GPRC5DQ9NZD1 345 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 PCDHA3Q9Y5H8 950 aa13.2□□□□□ -0.3
SLC28A1-203ENST00000394573 MCF2LO15068 1137 aa13.19□□□□□ -0.3
SLC28A1-203ENST00000394573 MAGEB2O15479 319 aa13.19□□□□□ -0.3
SLC28A1-203ENST00000394573 TATP17735 454 aaPredicted RBP13.19□□□□□ -0.3
SLC28A1-203ENST00000394573 RALGDSQ12967 914 aa13.19□□□□□ -0.3
SLC28A1-203ENST00000394573 NR1H3Q13133 447 aa13.19□□□□□ -0.3
SLC28A1-203ENST00000394573 NPY5RQ15761 445 aa13.19□□□□□ -0.3
SLC28A1-203ENST00000394573 LVRNQ6Q4G3 990 aa13.19□□□□□ -0.3
SLC28A1-203ENST00000394573 USP43Q70EL4 1123 aa13.19□□□□□ -0.3
SLC28A1-203ENST00000394573 TRMT10CQ7L0Y3 403 aaKnown RBP13.19□□□□□ -0.3
SLC28A1-203ENST00000394573 COPS6Q7L5N1 327 aa13.19□□□□□ -0.3
SLC28A1-203ENST00000394573 MIER3Q7Z3K6 550 aa13.19□□□□□ -0.3
SLC28A1-203ENST00000394573 NET1Q7Z628 596 aaPredicted RBP13.19□□□□□ -0.3
SLC28A1-203ENST00000394573 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.19□□□□□ -0.3
SLC28A1-203ENST00000394573 GRIN3AQ8TCU5 1115 aa13.19□□□□□ -0.3
SLC28A1-203ENST00000394573 KRT35Q92764 455 aa13.19□□□□□ -0.3
SLC28A1-203ENST00000394573 ATP2A3Q93084 1043 aa13.19□□□□□ -0.3
SLC28A1-203ENST00000394573 PALMDQ9NP74 551 aa13.19□□□□□ -0.3
SLC28A1-203ENST00000394573 CYLDQ9NQC7 956 aa13.19□□□□□ -0.3
SLC28A1-203ENST00000394573 KAT6BQ8WYB5 2073 aa13.19□□□□□ -0.3
SLC28A1-203ENST00000394573 PRR36Q9H6K5 1346 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms