RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 LRRC3Q9BY71 257 aa16.8■□□□□ 0.28
CHMP3-202ENST00000393773 LMAN1LQ9HAT1 526 aa16.8■□□□□ 0.28
CHMP3-202ENST00000393773 MAFFQ9ULX9 164 aa16.8■□□□□ 0.28
CHMP3-202ENST00000393773 PCDHB8Q9UN66 801 aa16.8■□□□□ 0.28
CHMP3-202ENST00000393773 CHD6Q8TD26 2715 aa16.79■□□□□ 0.28
CHMP3-202ENST00000393773 SCN1AP35498 2009 aa16.79■□□□□ 0.28
CHMP3-202ENST00000393773 ZNF638Q14966 1978 aaKnown RBP16.79■□□□□ 0.28
CHMP3-202ENST00000393773 DCDC2BA2VCK2 349 aa16.79■□□□□ 0.28
CHMP3-202ENST00000393773 HARSP12081 509 aaKnown RBP16.79■□□□□ 0.28
CHMP3-202ENST00000393773 CPB1P15086 417 aa16.79■□□□□ 0.28
CHMP3-202ENST00000393773 CCNE1P24864 410 aa16.79■□□□□ 0.28
CHMP3-202ENST00000393773 TRAPPC10P48553 1259 aa16.79■□□□□ 0.28
CHMP3-202ENST00000393773 NEK4P51957 841 aa16.79■□□□□ 0.28
CHMP3-202ENST00000393773 DMWDQ09019 674 aa16.79■□□□□ 0.28
CHMP3-202ENST00000393773 PTGDRQ13258 359 aa16.79■□□□□ 0.28
CHMP3-202ENST00000393773 PPP2R5DQ14738 602 aa16.79■□□□□ 0.28
CHMP3-202ENST00000393773 NOLC1Q14978 699 aaKnown RBP eCLIP16.79■□□□□ 0.28
CHMP3-202ENST00000393773 SLC10A6Q3KNW5 377 aa16.79■□□□□ 0.28
CHMP3-202ENST00000393773 MFSD6LQ8IWD5 586 aa16.79■□□□□ 0.28
CHMP3-202ENST00000393773 CELF5Q8N6W0 485 aaKnown RBP16.79■□□□□ 0.28
CHMP3-202ENST00000393773 APPL2Q8NEU8 664 aa16.79■□□□□ 0.28
CHMP3-202ENST00000393773 ZBTB45Q96K62 511 aaPredicted RBP16.79■□□□□ 0.28
CHMP3-202ENST00000393773 DRC1Q96MC2 740 aa16.79■□□□□ 0.28
CHMP3-202ENST00000393773 ZNF512Q96ME7 567 aaPredicted RBP16.79■□□□□ 0.28
CHMP3-202ENST00000393773 DNAJC25Q9H1X3 360 aa16.79■□□□□ 0.28
CHMP3-202ENST00000393773 CRISPLD1Q9H336 500 aa16.79■□□□□ 0.28
CHMP3-202ENST00000393773 KMT5AQ9NQR1 393 aa16.79■□□□□ 0.28
CHMP3-202ENST00000393773 ANKFY1Q9P2R3 1169 aa16.79■□□□□ 0.28
CHMP3-202ENST00000393773 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.79■□□□□ 0.28
CHMP3-202ENST00000393773 CNOT1A5YKK6 2376 aaKnown RBP16.78■□□□□ 0.28
CHMP3-202ENST00000393773 PP2D1A8MPX8 630 aa16.78■□□□□ 0.28
CHMP3-202ENST00000393773 HEPACAM2A8MVW5 462 aa16.78■□□□□ 0.28
CHMP3-202ENST00000393773 M0QZQ0 153 aa16.78■□□□□ 0.28
CHMP3-202ENST00000393773 ZNF263O14978 683 aa16.78■□□□□ 0.28
CHMP3-202ENST00000393773 LRP3O75074 770 aa16.78■□□□□ 0.28
CHMP3-202ENST00000393773 PAPSS2O95340 614 aaPredicted RBP16.78■□□□□ 0.28
CHMP3-202ENST00000393773 ADRB1P08588 477 aa16.78■□□□□ 0.28
CHMP3-202ENST00000393773 MLLT6P55198 1093 aaPredicted RBP16.78■□□□□ 0.28
CHMP3-202ENST00000393773 FCHO2Q0JRZ9 810 aa16.78■□□□□ 0.28
CHMP3-202ENST00000393773 PDIA5Q14554 519 aa16.78■□□□□ 0.28
CHMP3-202ENST00000393773 SEZ6Q53EL9 994 aa16.78■□□□□ 0.28
CHMP3-202ENST00000393773 RINT1Q6NUQ1 792 aa16.78■□□□□ 0.28
CHMP3-202ENST00000393773 C1orf186Q6ZWK4 172 aa16.78■□□□□ 0.28
CHMP3-202ENST00000393773 KCNK18Q7Z418 384 aa16.78■□□□□ 0.28
CHMP3-202ENST00000393773 FBXO18Q8NFZ0 1043 aa16.78■□□□□ 0.28
CHMP3-202ENST00000393773 MSANTD3Q96H12 275 aa16.78■□□□□ 0.28
CHMP3-202ENST00000393773 RAB23Q9ULC3 237 aa16.78■□□□□ 0.28
CHMP3-202ENST00000393773 RBM19Q9Y4C8 960 aaKnown RBP16.78■□□□□ 0.28
CHMP3-202ENST00000393773 FRYQ5TBA9 3013 aa16.78■□□□□ 0.28
CHMP3-202ENST00000393773 K7ESF4 209 aa16.77■□□□□ 0.28
CHMP3-202ENST00000393773 SLC16A4O15374 487 aa16.77■□□□□ 0.28
CHMP3-202ENST00000393773 TOM1L1O75674 476 aa16.77■□□□□ 0.28
CHMP3-202ENST00000393773 RETP07949 1114 aa16.77■□□□□ 0.28
CHMP3-202ENST00000393773 OR4Q2P0C623 313 aa16.77■□□□□ 0.28
CHMP3-202ENST00000393773 CXCL8P10145 99 aa16.77■□□□□ 0.28
CHMP3-202ENST00000393773 LRPAP1P30533 357 aa16.77■□□□□ 0.28
CHMP3-202ENST00000393773 AARSP49588 968 aaKnown RBP eCLIP16.77■□□□□ 0.28
CHMP3-202ENST00000393773 STXBP5Q5T5C0 1151 aa16.77■□□□□ 0.28
CHMP3-202ENST00000393773 PRR23BQ6ZRT6 265 aa16.77■□□□□ 0.28
CHMP3-202ENST00000393773 Q6ZS52 159 aa16.77■□□□□ 0.28
CHMP3-202ENST00000393773 CCDC83Q8IWF9 413 aa16.77■□□□□ 0.28
CHMP3-202ENST00000393773 SPEM1Q8N4L4 309 aa16.77■□□□□ 0.28
CHMP3-202ENST00000393773 NETO1Q8TDF5 533 aa16.77■□□□□ 0.28
CHMP3-202ENST00000393773 TCHPQ9BT92 498 aa16.77■□□□□ 0.28
CHMP3-202ENST00000393773 MMTAG2Q9BU76 263 aaKnown RBP16.77■□□□□ 0.28
CHMP3-202ENST00000393773 MKNK1Q9BUB5 465 aa16.77■□□□□ 0.28
CHMP3-202ENST00000393773 SLITRK6Q9H5Y7 841 aa16.77■□□□□ 0.28
CHMP3-202ENST00000393773 C17orf75Q9HAS0 396 aa16.77■□□□□ 0.28
CHMP3-202ENST00000393773 RBM12Q9NTZ6 932 aaKnown RBP16.77■□□□□ 0.28
CHMP3-202ENST00000393773 CEP295Q9C0D2 2601 aa16.76■□□□□ 0.27
CHMP3-202ENST00000393773 A0A1W2PRU2 124 aa16.76■□□□□ 0.27
CHMP3-202ENST00000393773 SLC38A8A6NNN8 435 aa16.76■□□□□ 0.27
CHMP3-202ENST00000393773 SLC30A4O14863 429 aa16.76■□□□□ 0.27
CHMP3-202ENST00000393773 CHADO15335 359 aa16.76■□□□□ 0.27
CHMP3-202ENST00000393773 OAZ2O95190 189 aa16.76■□□□□ 0.27
CHMP3-202ENST00000393773 GUCY2CP25092 1073 aa16.76■□□□□ 0.27
CHMP3-202ENST00000393773 CXCL12P48061 93 aa16.76■□□□□ 0.27
CHMP3-202ENST00000393773 SOX9P48436 509 aa16.76■□□□□ 0.27
CHMP3-202ENST00000393773 TOB1P50616 345 aaPredicted RBP16.76■□□□□ 0.27
CHMP3-202ENST00000393773 YWHAHQ04917 246 aaPredicted RBP16.76■□□□□ 0.27
CHMP3-202ENST00000393773 LRRC32Q14392 662 aa16.76■□□□□ 0.27
CHMP3-202ENST00000393773 IL17AQ16552 155 aa16.76■□□□□ 0.27
CHMP3-202ENST00000393773 TXNDC11Q6PKC3 985 aa16.76■□□□□ 0.27
CHMP3-202ENST00000393773 TMEM161BQ8NDZ6 487 aa16.76■□□□□ 0.27
CHMP3-202ENST00000393773 E2F7Q96AV8 911 aa16.76■□□□□ 0.27
CHMP3-202ENST00000393773 PGLYRP2Q96PD5 576 aa16.76■□□□□ 0.27
CHMP3-202ENST00000393773 LLPHQ9BRT6 129 aaKnown RBP16.76■□□□□ 0.27
CHMP3-202ENST00000393773 NTPCRQ9BSD7 190 aaKnown RBP16.76■□□□□ 0.27
CHMP3-202ENST00000393773 GPR88Q9GZN0 384 aa16.76■□□□□ 0.27
CHMP3-202ENST00000393773 HAPLN2Q9GZV7 340 aa16.76■□□□□ 0.27
CHMP3-202ENST00000393773 SEMA4GQ9NTN9 838 aa16.76■□□□□ 0.27
CHMP3-202ENST00000393773 NOL7Q9UMY1 257 aaKnown RBP16.76■□□□□ 0.27
CHMP3-202ENST00000393773 DNM3Q9UQ16 869 aa16.76■□□□□ 0.27
CHMP3-202ENST00000393773 PCDHB6Q9Y5E3 794 aa16.76■□□□□ 0.27
CHMP3-202ENST00000393773 STK24Q9Y6E0 443 aa16.76■□□□□ 0.27
CHMP3-202ENST00000393773 CHURC1-FNTBB4DL54 471 aa16.75■□□□□ 0.27
CHMP3-202ENST00000393773 MAPTP10636 758 aaKnown RBP16.75■□□□□ 0.27
CHMP3-202ENST00000393773 FNTBP49356 437 aa16.75■□□□□ 0.27
CHMP3-202ENST00000393773 MCL1Q07820 350 aa16.75■□□□□ 0.27
CHMP3-202ENST00000393773 SRSF5Q13243 272 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms