RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 RARBP10826 455 aa22.81■■□□□ 1.24
SPHK1-202ENST00000392496 CLCN6P51797 869 aa22.81■■□□□ 1.24
SPHK1-202ENST00000392496 CRYBB1P53674 252 aaPredicted RBP22.81■■□□□ 1.24
SPHK1-202ENST00000392496 CACNB2Q08289 660 aaPredicted RBP22.81■■□□□ 1.24
SPHK1-202ENST00000392496 DERAQ9Y315 318 aa22.81■■□□□ 1.24
SPHK1-202ENST00000392496 GNRH1P01148 92 aa22.8■■□□□ 1.24
SPHK1-202ENST00000392496 ITGB3P05106 788 aa22.8■■□□□ 1.24
SPHK1-202ENST00000392496 RHOXF2BP0C7M4 288 aa22.8■■□□□ 1.24
SPHK1-202ENST00000392496 DNA2P51530 1060 aa22.8■■□□□ 1.24
SPHK1-202ENST00000392496 RHOXF2Q9BQY4 288 aa22.8■■□□□ 1.24
SPHK1-202ENST00000392496 SELENOOQ9BVL4 669 aa22.8■■□□□ 1.24
SPHK1-202ENST00000392496 BCO2Q9BYV7 579 aa22.8■■□□□ 1.24
SPHK1-202ENST00000392496 AVENQ9NQS1 362 aaPredicted RBP22.8■■□□□ 1.24
SPHK1-202ENST00000392496 ITGA11Q9UKX5 1188 aa22.8■■□□□ 1.24
SPHK1-202ENST00000392496 FAM170AA1A519 330 aa22.79■■□□□ 1.24
SPHK1-202ENST00000392496 THAP12O43422 761 aa22.79■■□□□ 1.24
SPHK1-202ENST00000392496 STAU1O95793 577 aaKnown RBP22.79■■□□□ 1.24
SPHK1-202ENST00000392496 C2orf54Q08AI8 447 aa22.79■■□□□ 1.24
SPHK1-202ENST00000392496 BRD3Q15059 726 aa22.79■■□□□ 1.24
SPHK1-202ENST00000392496 MCOLN2Q8IZK6 566 aa22.79■■□□□ 1.24
SPHK1-202ENST00000392496 ZNF606Q8WXB4 792 aa22.79■■□□□ 1.24
SPHK1-202ENST00000392496 MS4A14Q96JA4 679 aa22.79■■□□□ 1.24
SPHK1-202ENST00000392496 NUP85Q9BW27 656 aa22.79■■□□□ 1.24
SPHK1-202ENST00000392496 CNOT8Q9UFF9 292 aaKnown RBP22.79■■□□□ 1.24
SPHK1-202ENST00000392496 PGK1P00558 417 aa22.78■■□□□ 1.24
SPHK1-202ENST00000392496 CD58P19256 250 aa22.78■■□□□ 1.24
SPHK1-202ENST00000392496 NSFP46459 744 aaKnown RBP22.78■■□□□ 1.24
SPHK1-202ENST00000392496 NOMO3P69849 1222 aa22.78■■□□□ 1.24
SPHK1-202ENST00000392496 TRIM32Q13049 653 aa22.78■■□□□ 1.24
SPHK1-202ENST00000392496 ZNF564Q8TBZ8 553 aaPredicted RBP22.78■■□□□ 1.24
SPHK1-202ENST00000392496 CYFIP2Q96F07 1278 aa22.78■■□□□ 1.24
SPHK1-202ENST00000392496 RPS6KC1Q96S38 1066 aa22.78■■□□□ 1.24
SPHK1-202ENST00000392496 EHD2Q9NZN4 543 aa22.78■■□□□ 1.24
SPHK1-202ENST00000392496 GTF2IRD1Q9UHL9 959 aa22.78■■□□□ 1.24
SPHK1-202ENST00000392496 POLIQ9UNA4 740 aa22.78■■□□□ 1.24
SPHK1-202ENST00000392496 TARSL2A2RTX5 802 aaKnown RBP22.78■■□□□ 1.24
SPHK1-202ENST00000392496 ATMINO43313 823 aaPredicted RBP22.78■■□□□ 1.24
SPHK1-202ENST00000392496 ADAMTS4O75173 837 aa22.78■■□□□ 1.24
SPHK1-202ENST00000392496 WEE2P0C1S8 567 aa22.78■■□□□ 1.24
SPHK1-202ENST00000392496 RBP5P82980 135 aa22.78■■□□□ 1.24
SPHK1-202ENST00000392496 CAP1Q01518 475 aa22.78■■□□□ 1.24
SPHK1-202ENST00000392496 NAA35Q5VZE5 725 aa22.78■■□□□ 1.24
SPHK1-202ENST00000392496 SCARA5Q6ZMJ2 495 aa22.78■■□□□ 1.24
SPHK1-202ENST00000392496 ACTRT1Q8TDG2 376 aa22.78■■□□□ 1.24
SPHK1-202ENST00000392496 TMEM40Q8WWA1 233 aa22.78■■□□□ 1.24
SPHK1-202ENST00000392496 KIF12Q96FN5 646 aa22.78■■□□□ 1.24
SPHK1-202ENST00000392496 VCPIP1Q96JH7 1222 aa22.78■■□□□ 1.24
SPHK1-202ENST00000392496 SNX27Q96L92 541 aa22.78■■□□□ 1.24
SPHK1-202ENST00000392496 PNKPQ96T60 521 aa22.78■■□□□ 1.24
SPHK1-202ENST00000392496 EIF2AQ9BY44 585 aaKnown RBP22.78■■□□□ 1.24
SPHK1-202ENST00000392496 CYP3A43Q9HB55 503 aa22.78■■□□□ 1.24
SPHK1-202ENST00000392496 DPP3Q9NY33 737 aa22.78■■□□□ 1.24
SPHK1-202ENST00000392496 SNTG2Q9NY99 539 aa22.78■■□□□ 1.24
SPHK1-202ENST00000392496 NXF1Q9UBU9 619 aaKnown RBP22.78■■□□□ 1.24
SPHK1-202ENST00000392496 ALG6Q9Y672 507 aa22.78■■□□□ 1.24
SPHK1-202ENST00000392496 CCDC151A5D8V7 595 aa22.77■■□□□ 1.24
SPHK1-202ENST00000392496 P4HA1P13674 534 aa22.77■■□□□ 1.24
SPHK1-202ENST00000392496 POLR2BP30876 1174 aaKnown RBP22.77■■□□□ 1.24
SPHK1-202ENST00000392496 YARSP54577 528 aaKnown RBP22.77■■□□□ 1.24
SPHK1-202ENST00000392496 NBPF20Q3BBV1 942 aa22.77■■□□□ 1.24
SPHK1-202ENST00000392496 WDR72Q3MJ13 1102 aa22.77■■□□□ 1.24
SPHK1-202ENST00000392496 CCDC70Q6NSX1 233 aa22.77■■□□□ 1.24
SPHK1-202ENST00000392496 CXCL17Q6UXB2 119 aa22.77■■□□□ 1.24
SPHK1-202ENST00000392496 MON1BQ7L1V2 547 aa22.77■■□□□ 1.24
SPHK1-202ENST00000392496 PHF13Q86YI8 300 aaPredicted RBP22.77■■□□□ 1.24
SPHK1-202ENST00000392496 ZNF296Q8WUU4 475 aaPredicted RBP22.77■■□□□ 1.24
SPHK1-202ENST00000392496 CPA5Q8WXQ8 436 aa22.77■■□□□ 1.24
SPHK1-202ENST00000392496 FAM124BQ9H5Z6 455 aaPredicted RBP22.77■■□□□ 1.24
SPHK1-202ENST00000392496 SMARCAL1Q9NZC9 954 aa22.77■■□□□ 1.24
SPHK1-202ENST00000392496 DDX3YO15523 660 aaKnown RBP22.76■■□□□ 1.23
SPHK1-202ENST00000392496 CTCFP49711 727 aaPredicted RBP22.76■■□□□ 1.23
SPHK1-202ENST00000392496 PTPROQ16827 1216 aa22.76■■□□□ 1.23
SPHK1-202ENST00000392496 WDR93Q6P2C0 686 aa22.76■■□□□ 1.23
SPHK1-202ENST00000392496 TMCO3Q6UWJ1 677 aa22.76■■□□□ 1.23
SPHK1-202ENST00000392496 RASGEF1CQ8N431 466 aa22.76■■□□□ 1.23
SPHK1-202ENST00000392496 CELF4Q9BZC1 486 aaKnown RBP22.76■■□□□ 1.23
SPHK1-202ENST00000392496 XPNPEP3Q9NQH7 507 aa22.76■■□□□ 1.23
SPHK1-202ENST00000392496 AGAP1Q9UPQ3 857 aa22.76■■□□□ 1.23
SPHK1-202ENST00000392496 PIN4Q9Y237 131 aaKnown RBP22.76■■□□□ 1.23
SPHK1-202ENST00000392496 MIF4GDA9UHW6 222 aaKnown RBP22.76■■□□□ 1.23
SPHK1-202ENST00000392496 LSM8O95777 96 aaKnown RBP22.76■■□□□ 1.23
SPHK1-202ENST00000392496 CFHP08603 1231 aa22.76■■□□□ 1.23
SPHK1-202ENST00000392496 USP38Q8NB14 1042 aa22.76■■□□□ 1.23
SPHK1-202ENST00000392496 HPDLQ96IR7 371 aa22.76■■□□□ 1.23
SPHK1-202ENST00000392496 TRIM6Q9C030 488 aaPredicted RBP22.76■■□□□ 1.23
SPHK1-202ENST00000392496 CEP104O60308 925 aa22.75■■□□□ 1.23
SPHK1-202ENST00000392496 HSPA1AP0DMV8 641 aaKnown RBP22.75■■□□□ 1.23
SPHK1-202ENST00000392496 HSPA1BP0DMV9 641 aaKnown RBP22.75■■□□□ 1.23
SPHK1-202ENST00000392496 MCM3P25205 808 aa22.75■■□□□ 1.23
SPHK1-202ENST00000392496 LIN9Q5TKA1 542 aa22.75■■□□□ 1.23
SPHK1-202ENST00000392496 ALKAL1Q6UXT8 129 aa22.75■■□□□ 1.23
SPHK1-202ENST00000392496 RSPH3Q86UC2 560 aa22.75■■□□□ 1.23
SPHK1-202ENST00000392496 KLHDC9Q8NEP7 349 aa22.75■■□□□ 1.23
SPHK1-202ENST00000392496 SRRDQ9UH36 339 aa22.75■■□□□ 1.23
SPHK1-202ENST00000392496 CHORDC1Q9UHD1 332 aaPredicted RBP22.75■■□□□ 1.23
SPHK1-202ENST00000392496 PCDHGC3Q9UN70 934 aa22.75■■□□□ 1.23
SPHK1-202ENST00000392496 RPLP2P05387 115 aaKnown RBP22.74■■□□□ 1.23
SPHK1-202ENST00000392496 PAEPP09466 180 aa22.74■■□□□ 1.23
SPHK1-202ENST00000392496 PRKAR2AP13861 404 aaKnown RBP22.74■■□□□ 1.23
SPHK1-202ENST00000392496 CST5P28325 142 aaPredicted RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms