RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 ATP1A1P05023 1023 aaKnown RBP13.05□□□□□ -0.32
SPTBN1-203ENST00000389980 LPIN1Q14693 890 aa13.05□□□□□ -0.32
SPTBN1-203ENST00000389980 ZNF667Q5HYK9 610 aa13.05□□□□□ -0.32
SPTBN1-203ENST00000389980 CD302Q8IX05 232 aa13.05□□□□□ -0.32
SPTBN1-203ENST00000389980 LPPQ93052 612 aa13.05□□□□□ -0.32
SPTBN1-203ENST00000389980 HPDLQ96IR7 371 aa13.05□□□□□ -0.32
SPTBN1-203ENST00000389980 NAPGQ99747 312 aaPredicted RBP13.05□□□□□ -0.32
SPTBN1-203ENST00000389980 SDCBP2Q9H190 292 aa13.05□□□□□ -0.32
SPTBN1-203ENST00000389980 SMYD3Q9H7B4 428 aa13.05□□□□□ -0.32
SPTBN1-203ENST00000389980 CNTN3Q9P232 1028 aa13.05□□□□□ -0.32
SPTBN1-203ENST00000389980 CHORDC1Q9UHD1 332 aaPredicted RBP13.05□□□□□ -0.32
SPTBN1-203ENST00000389980 PUF60Q9UHX1 559 aaKnown RBP13.05□□□□□ -0.32
SPTBN1-203ENST00000389980 PCDHB2Q9Y5E7 798 aa13.05□□□□□ -0.32
SPTBN1-203ENST00000389980 SMIM28A0A1B0GU29 152 aa13.04□□□□□ -0.32
SPTBN1-203ENST00000389980 MGEA5O60502 916 aa13.04□□□□□ -0.32
SPTBN1-203ENST00000389980 TACC1O75410 805 aa13.04□□□□□ -0.32
SPTBN1-203ENST00000389980 FTLP02792 175 aaPredicted RBP13.04□□□□□ -0.32
SPTBN1-203ENST00000389980 ORC1Q13415 861 aa13.04□□□□□ -0.32
SPTBN1-203ENST00000389980 ZBTB6Q15916 424 aa13.04□□□□□ -0.32
SPTBN1-203ENST00000389980 TXLNBQ8N3L3 684 aa13.04□□□□□ -0.32
SPTBN1-203ENST00000389980 ARHGEF26Q96DR7 871 aa13.04□□□□□ -0.32
SPTBN1-203ENST00000389980 ZFP42Q96MM3 310 aa13.04□□□□□ -0.32
SPTBN1-203ENST00000389980 THAP2Q9H0W7 228 aa13.04□□□□□ -0.32
SPTBN1-203ENST00000389980 RNF208Q9H0X6 261 aa13.04□□□□□ -0.32
SPTBN1-203ENST00000389980 GOLPH3Q9H4A6 298 aa13.04□□□□□ -0.32
SPTBN1-203ENST00000389980 L2HGDHQ9H9P8 463 aa13.04□□□□□ -0.32
SPTBN1-203ENST00000389980 GOLGA2P5Q9HBQ8 144 aa13.04□□□□□ -0.32
SPTBN1-203ENST00000389980 ITGA11Q9UKX5 1188 aa13.04□□□□□ -0.32
SPTBN1-203ENST00000389980 CNTN6Q9UQ52 1028 aa13.04□□□□□ -0.32
SPTBN1-203ENST00000389980 CKBP12277 381 aa13.04□□□□□ -0.32
SPTBN1-203ENST00000389980 GNA15P30679 374 aa13.04□□□□□ -0.32
SPTBN1-203ENST00000389980 NOP2P46087 812 aaKnown RBP13.04□□□□□ -0.32
SPTBN1-203ENST00000389980 AFF1P51825 1210 aaKnown RBP13.04□□□□□ -0.32
SPTBN1-203ENST00000389980 RBP5P82980 135 aa13.04□□□□□ -0.32
SPTBN1-203ENST00000389980 PTPN11Q06124 597 aaPredicted RBP13.04□□□□□ -0.32
SPTBN1-203ENST00000389980 GABPB1Q06547 395 aaPredicted RBP13.04□□□□□ -0.32
SPTBN1-203ENST00000389980 PAK2Q13177 524 aa13.04□□□□□ -0.32
SPTBN1-203ENST00000389980 SLC43A3Q8NBI5 491 aa13.04□□□□□ -0.32
SPTBN1-203ENST00000389980 TRIM58Q8NG06 486 aa13.04□□□□□ -0.32
SPTBN1-203ENST00000389980 ANKRD7Q92527 254 aa13.04□□□□□ -0.32
SPTBN1-203ENST00000389980 NOX5Q96PH1 765 aa13.04□□□□□ -0.32
SPTBN1-203ENST00000389980 ERVK-5Q9HDB9 667 aa13.04□□□□□ -0.32
SPTBN1-203ENST00000389980 PAK6Q9NQU5 681 aaPredicted RBP13.04□□□□□ -0.32
SPTBN1-203ENST00000389980 PRDM10Q9NQV6 1147 aa13.04□□□□□ -0.32
SPTBN1-203ENST00000389980 FAM105AQ9NUU6 356 aa13.04□□□□□ -0.32
SPTBN1-203ENST00000389980 PHF24Q9UPV7 400 aa13.04□□□□□ -0.32
SPTBN1-203ENST00000389980 ARVCFO00192 962 aa13.03□□□□□ -0.32
SPTBN1-203ENST00000389980 GPR182O15218 404 aa13.03□□□□□ -0.32
SPTBN1-203ENST00000389980 ATMINO43313 823 aaPredicted RBP13.03□□□□□ -0.32
SPTBN1-203ENST00000389980 NCK2O43639 380 aa13.03□□□□□ -0.32
SPTBN1-203ENST00000389980 PALMO75781 387 aa13.03□□□□□ -0.32
SPTBN1-203ENST00000389980 CCL5P13501 91 aa13.03□□□□□ -0.32
SPTBN1-203ENST00000389980 ZNF132P52740 706 aa13.03□□□□□ -0.32
SPTBN1-203ENST00000389980 SOX4Q06945 474 aaPredicted RBP13.03□□□□□ -0.32
SPTBN1-203ENST00000389980 PDE4CQ08493 712 aa13.03□□□□□ -0.32
SPTBN1-203ENST00000389980 PTPROQ16827 1216 aa13.03□□□□□ -0.32
SPTBN1-203ENST00000389980 NT5DC4Q86YG4 428 aa13.03□□□□□ -0.32
SPTBN1-203ENST00000389980 PASD1Q8IV76 773 aa13.03□□□□□ -0.32
SPTBN1-203ENST00000389980 TAF4BQ92750 862 aa13.03□□□□□ -0.32
SPTBN1-203ENST00000389980 BCO2Q9BYV7 579 aa13.03□□□□□ -0.32
SPTBN1-203ENST00000389980 ISCUQ9H1K1 167 aa13.03□□□□□ -0.32
SPTBN1-203ENST00000389980 OSGEPQ9NPF4 335 aa13.03□□□□□ -0.32
SPTBN1-203ENST00000389980 HMGXB4Q9UGU5 601 aa13.03□□□□□ -0.32
SPTBN1-203ENST00000389980 THAP12O43422 761 aa13.03□□□□□ -0.32
SPTBN1-203ENST00000389980 SRGAP2O75044 1071 aa13.03□□□□□ -0.32
SPTBN1-203ENST00000389980 BRD2P25440 801 aaKnown RBP13.03□□□□□ -0.32
SPTBN1-203ENST00000389980 BPIFB4P59827 614 aa13.03□□□□□ -0.32
SPTBN1-203ENST00000389980 MBTPS1Q14703 1052 aa13.03□□□□□ -0.32
SPTBN1-203ENST00000389980 ELF2Q15723 593 aa13.03□□□□□ -0.32
SPTBN1-203ENST00000389980 C2CD6Q53TS8 623 aa13.03□□□□□ -0.32
SPTBN1-203ENST00000389980 RNF10Q8N5U6 811 aaKnown RBP13.03□□□□□ -0.32
SPTBN1-203ENST00000389980 BEST2Q8NFU1 509 aa13.03□□□□□ -0.32
SPTBN1-203ENST00000389980 CPA5Q8WXQ8 436 aa13.03□□□□□ -0.32
SPTBN1-203ENST00000389980 CYFIP2Q96F07 1278 aa13.03□□□□□ -0.32
SPTBN1-203ENST00000389980 MMS19Q96T76 1030 aa13.03□□□□□ -0.32
SPTBN1-203ENST00000389980 ZSWIM1Q9BR11 485 aa13.03□□□□□ -0.32
SPTBN1-203ENST00000389980 OGFRQ9NZT2 677 aa13.03□□□□□ -0.32
SPTBN1-203ENST00000389980 DERAQ9Y315 318 aa13.03□□□□□ -0.32
SPTBN1-203ENST00000389980 MRFAP1Q9Y605 127 aa13.03□□□□□ -0.32
SPTBN1-203ENST00000389980 RTN2O75298 545 aa13.02□□□□□ -0.33
SPTBN1-203ENST00000389980 FTCDO95954 541 aa13.02□□□□□ -0.33
SPTBN1-203ENST00000389980 RPLP2P05387 115 aaKnown RBP13.02□□□□□ -0.33
SPTBN1-203ENST00000389980 TMEM253P0C7T8 217 aa13.02□□□□□ -0.33
SPTBN1-203ENST00000389980 ATICP31939 592 aa13.02□□□□□ -0.33
SPTBN1-203ENST00000389980 FAM26DQ5JW98 314 aa13.02□□□□□ -0.33
SPTBN1-203ENST00000389980 TRAF7Q6Q0C0 670 aa13.02□□□□□ -0.33
SPTBN1-203ENST00000389980 RNF169Q8NCN4 708 aa13.02□□□□□ -0.33
SPTBN1-203ENST00000389980 SLC35G2Q8TBE7 412 aa13.02□□□□□ -0.33
SPTBN1-203ENST00000389980 ZNF606Q8WXB4 792 aa13.02□□□□□ -0.33
SPTBN1-203ENST00000389980 CTNNBL1Q8WYA6 563 aaPredicted RBP13.02□□□□□ -0.33
SPTBN1-203ENST00000389980 ALS2CR12Q96Q35 445 aa13.02□□□□□ -0.33
SPTBN1-203ENST00000389980 TWNKQ96RR1 684 aa13.02□□□□□ -0.33
SPTBN1-203ENST00000389980 CHST12Q9NRB3 414 aa13.02□□□□□ -0.33
SPTBN1-203ENST00000389980 CACNG4Q9UBN1 327 aa13.02□□□□□ -0.33
SPTBN1-203ENST00000389980 INTUQ9ULD6 942 aa13.02□□□□□ -0.33
SPTBN1-203ENST00000389980 UBQLN1Q9UMX0 589 aaKnown RBP13.02□□□□□ -0.33
SPTBN1-203ENST00000389980 GRID2IPA4D2P6 1211 aa13.01□□□□□ -0.33
SPTBN1-203ENST00000389980 ANKRD62A6NC57 917 aa13.01□□□□□ -0.33
SPTBN1-203ENST00000389980 BTNL10A8MVZ5 291 aa13.01□□□□□ -0.33
SPTBN1-203ENST00000389980 DNM1LO00429 736 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms