RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 RSPH14Q9UHP6 348 aa8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 AGTPBP1Q9UPW5 1226 aa8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 DNAJC25-GNG10A0A024R161 153 aa8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 DCDC2CA8MYV0 355 aa8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 EIF3HO15372 352 aaKnown RBP eCLIP8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 B4GALT5O43286 388 aa8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 NR1D1P20393 614 aa8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 SCNN1AP37088 669 aa8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 COILP38432 576 aaPredicted RBP8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 NSFP46459 744 aaKnown RBP8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 MYL6P60660 151 aa8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 OSTNP61366 133 aa8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 PPP2R5EQ16537 467 aa8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 CYP1B1Q16678 543 aa8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 GJC2Q5T442 439 aaPredicted RBP8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 ZPBP2Q6X784 338 aa8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 KDM7AQ6ZMT4 941 aa8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 RHPN2Q8IUC4 686 aa8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 BRSK2Q8IWQ3 736 aa8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 ABRAQ8N0Z2 381 aa8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 OPTNQ96CV9 577 aa8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 AVENQ9NQS1 362 aaPredicted RBP8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 IGKV6-21A0A0C4DH24 114 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 NOP56O00567 594 aaKnown RBP8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 CXCL11O14625 94 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 THAP12O43422 761 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 PPFIA2O75334 1257 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 LGR5O75473 907 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 TOM1L1O75674 476 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 SHBGP04278 402 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 IVLP07476 585 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 MYZAPP0CAP1 466 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 HSPA6P17066 643 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 HPDP32754 393 aaPredicted RBP8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 BPIFB4P59827 614 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 PTP4A2Q12974 167 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 SNX1Q13596 522 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 CLUL1Q15846 466 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 ZNF394Q53GI3 561 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 IER5Q5VY09 327 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 CDCA2Q69YH5 1023 aaPredicted RBP8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 GPAT2Q6NUI2 795 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 CCDC62Q6P9F0 684 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 MMS22LQ6ZRQ5 1243 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 CCDC105Q8IYK2 499 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 ATG4AQ8WYN0 398 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 FAM81BQ96LP2 452 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 SPATA33Q96N06 139 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 MRPL4Q9BYD3 311 aaKnown RBP8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 CHST7Q9NS84 486 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 GEMIN8Q9NWZ8 242 aaKnown RBP8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 KCNH4Q9UQ05 1017 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 CNTN6Q9UQ52 1028 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 HMGB1P1B2RPK0 211 aaPredicted RBP8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 ANKRD65E5RJM6 399 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 FSCN2O14926 492 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 ZEB2O60315 1214 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 PPFIA4O75335 1185 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 CSDE1O75534 798 aaKnown RBP8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 SLC25A27O95847 323 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 ASS1P00966 412 aaKnown RBP8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 PRKCBP05771 671 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 CD58P19256 250 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 DRG2P55039 364 aaKnown RBP8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 TAS2R40P59535 323 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 MAMLD1Q13495 774 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 ANKS1BQ7Z6G8 1248 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 TMEM192Q8IY95 271 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 UBR7Q8N806 425 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 C1orf131Q8NDD1 294 aaKnown RBP8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 FBXO41Q8TF61 875 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 ZNF606Q8WXB4 792 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 NLRP4Q96MN2 994 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 MMP19Q99542 508 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 MINDY3Q9H8M7 445 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 ADAM22Q9P0K1 906 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 IQCF3P0C7M6 154 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 TXNP10599 105 aaKnown RBP8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 CYP2C8P10632 490 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 GJA5P36382 358 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 CLCN3P51790 818 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 EFNA5P52803 228 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 MTMR3Q13615 1198 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 KCTD2Q14681 263 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 MAPK6Q16659 721 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 EMC10Q5UCC4 262 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 EFCAB13Q8IY85 973 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 THNSL1Q8IYQ7 743 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 BCAS4Q8TDM0 211 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 FAM118BQ9BPY3 351 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 RNPEPQ9H4A4 650 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 EFCC1Q9HA90 598 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 CWC15Q9P013 229 aaKnown RBP8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 RASAL2Q9UJF2 1139 aa8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 CPSF3Q9UKF6 684 aaKnown RBP8.48□□□□□ -1.05
PDLIM5-204ENST00000380176 OGTO15294 1046 aa8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 TP73O15350 636 aa8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 PROSCO94903 275 aa8.47□□□□□ -1.05
PDLIM5-204ENST00000380176 WEE2P0C1S8 567 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms