RNA–Protein interactions for RNA: ENST00000378825.4

CCDC3-201, Transcript of coiled-coil domain containing 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC3, Length 2,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC3-201ENST00000378825 OTOAQ7RTW8 1153 aa19.57■□□□□ 0.72
CCDC3-201ENST00000378825 TAB3Q8N5C8 712 aaPredicted RBP19.57■□□□□ 0.72
CCDC3-201ENST00000378825 TEKT3Q9BXF9 490 aa19.57■□□□□ 0.72
CCDC3-201ENST00000378825 UBN1Q9NPG3 1134 aa19.57■□□□□ 0.72
CCDC3-201ENST00000378825 SERPINA10Q9UK55 444 aa19.57■□□□□ 0.72
CCDC3-201ENST00000378825 P4HA2O15460 535 aa19.57■□□□□ 0.72
CCDC3-201ENST00000378825 WFS1O76024 890 aa19.57■□□□□ 0.72
CCDC3-201ENST00000378825 KLRC2P26717 231 aa19.57■□□□□ 0.72
CCDC3-201ENST00000378825 RARRES1P49788 294 aa19.57■□□□□ 0.72
CCDC3-201ENST00000378825 NOP14P78316 857 aaKnown RBP19.57■□□□□ 0.72
CCDC3-201ENST00000378825 UGCGQ16739 394 aa19.57■□□□□ 0.72
CCDC3-201ENST00000378825 PARP6Q2NL67 630 aa19.57■□□□□ 0.72
CCDC3-201ENST00000378825 UMODL1Q5DID0 1318 aa19.57■□□□□ 0.72
CCDC3-201ENST00000378825 PLA2G4FQ68DD2 849 aa19.57■□□□□ 0.72
CCDC3-201ENST00000378825 MTDHQ86UE4 582 aaKnown RBP19.57■□□□□ 0.72
CCDC3-201ENST00000378825 UCMAQ8WVF2 138 aa19.57■□□□□ 0.72
CCDC3-201ENST00000378825 KLF6Q99612 283 aaPredicted RBP19.57■□□□□ 0.72
CCDC3-201ENST00000378825 MAK16Q9BXY0 300 aaKnown RBP19.57■□□□□ 0.72
CCDC3-201ENST00000378825 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.57■□□□□ 0.72
CCDC3-201ENST00000378825 METTL5Q9NRN9 209 aaKnown RBP19.57■□□□□ 0.72
CCDC3-201ENST00000378825 FBXO28Q9NVF7 368 aa19.57■□□□□ 0.72
CCDC3-201ENST00000378825 DNPEPQ9ULA0 475 aa19.57■□□□□ 0.72
CCDC3-201ENST00000378825 MAPK13O15264 365 aa19.56■□□□□ 0.72
CCDC3-201ENST00000378825 KHDC1Q4VXA5 237 aaKnown RBP19.56■□□□□ 0.72
CCDC3-201ENST00000378825 DSTYKQ6XUX3 929 aa19.56■□□□□ 0.72
CCDC3-201ENST00000378825 GRAMD1AQ96CP6 724 aa19.56■□□□□ 0.72
CCDC3-201ENST00000378825 C11orf70Q9BRQ4 267 aa19.56■□□□□ 0.72
CCDC3-201ENST00000378825 PLVAPQ9BX97 442 aa19.56■□□□□ 0.72
CCDC3-201ENST00000378825 OSBPL8Q9BZF1 889 aa19.56■□□□□ 0.72
CCDC3-201ENST00000378825 TMEM206Q9H813 350 aa19.56■□□□□ 0.72
CCDC3-201ENST00000378825 C10orf88Q9H8K7 445 aa19.56■□□□□ 0.72
CCDC3-201ENST00000378825 VPS37BQ9H9H4 285 aa19.56■□□□□ 0.72
CCDC3-201ENST00000378825 GOLGA8RI6L899 631 aa19.56■□□□□ 0.72
CCDC3-201ENST00000378825 UNGP13051 313 aaPredicted RBP19.56■□□□□ 0.72
CCDC3-201ENST00000378825 PECAM1P16284 738 aaPredicted RBP19.56■□□□□ 0.72
CCDC3-201ENST00000378825 ERFP50548 548 aa19.56■□□□□ 0.72
CCDC3-201ENST00000378825 STAT2P52630 851 aa19.56■□□□□ 0.72
CCDC3-201ENST00000378825 MAPK6Q16659 721 aa19.56■□□□□ 0.72
CCDC3-201ENST00000378825 KRT39Q6A163 491 aa19.56■□□□□ 0.72
CCDC3-201ENST00000378825 SV2AQ7L0J3 742 aa19.56■□□□□ 0.72
CCDC3-201ENST00000378825 MIER3Q7Z3K6 550 aa19.56■□□□□ 0.72
CCDC3-201ENST00000378825 ANKMY2Q8IV38 441 aa19.56■□□□□ 0.72
CCDC3-201ENST00000378825 GRK7Q8WTQ7 553 aa19.56■□□□□ 0.72
CCDC3-201ENST00000378825 NT5C1BQ96P26 610 aa19.56■□□□□ 0.72
CCDC3-201ENST00000378825 KANSL3Q9P2N6 904 aa19.56■□□□□ 0.72
CCDC3-201ENST00000378825 SLX4Q8IY92 1834 aa19.56■□□□□ 0.72
CCDC3-201ENST00000378825 MYPNQ86TC9 1320 aa19.55■□□□□ 0.72
CCDC3-201ENST00000378825 PLS3P13797 630 aa19.55■□□□□ 0.72
CCDC3-201ENST00000378825 AGGF1Q8N302 714 aaeCLIP19.55■□□□□ 0.72
CCDC3-201ENST00000378825 RFWD2Q8NHY2 731 aa19.55■□□□□ 0.72
CCDC3-201ENST00000378825 ASAP3Q8TDY4 903 aa19.55■□□□□ 0.72
CCDC3-201ENST00000378825 CCDC77Q9BR77 488 aa19.55■□□□□ 0.72
CCDC3-201ENST00000378825 RAB20Q9NX57 234 aa19.55■□□□□ 0.72
CCDC3-201ENST00000378825 RAD17O75943 681 aa19.55■□□□□ 0.72
CCDC3-201ENST00000378825 DSG3P32926 999 aa19.55■□□□□ 0.72
CCDC3-201ENST00000378825 SPARCL1Q14515 664 aa19.55■□□□□ 0.72
CCDC3-201ENST00000378825 SPOPLQ6IQ16 392 aa19.55■□□□□ 0.72
CCDC3-201ENST00000378825 APBB1IPQ7Z5R6 666 aaPredicted RBP19.55■□□□□ 0.72
CCDC3-201ENST00000378825 CCDC125Q86Z20 511 aa19.55■□□□□ 0.72
CCDC3-201ENST00000378825 LRRC8CQ8TDW0 803 aa19.55■□□□□ 0.72
CCDC3-201ENST00000378825 KCND2Q9NZV8 630 aa19.55■□□□□ 0.72
CCDC3-201ENST00000378825 C2orf71A6NGG8 1288 aa19.54■□□□□ 0.72
CCDC3-201ENST00000378825 MAGEB2O15479 319 aa19.54■□□□□ 0.72
CCDC3-201ENST00000378825 MYBPC2Q14324 1141 aa19.54■□□□□ 0.72
CCDC3-201ENST00000378825 PDK4Q16654 411 aa19.54■□□□□ 0.72
CCDC3-201ENST00000378825 LVRNQ6Q4G3 990 aa19.54■□□□□ 0.72
CCDC3-201ENST00000378825 NLRP9Q7RTR0 991 aa19.54■□□□□ 0.72
CCDC3-201ENST00000378825 CCDC89Q8N998 374 aa19.54■□□□□ 0.72
CCDC3-201ENST00000378825 PHC3Q8NDX5 983 aa19.54■□□□□ 0.72
CCDC3-201ENST00000378825 VIL1P09327 827 aaKnown RBP19.54■□□□□ 0.72
CCDC3-201ENST00000378825 ADRA1DP25100 572 aa19.54■□□□□ 0.72
CCDC3-201ENST00000378825 ZCCHC9Q8N567 271 aaKnown RBP19.54■□□□□ 0.72
CCDC3-201ENST00000378825 FBXL13Q8NEE6 735 aa19.54■□□□□ 0.72
CCDC3-201ENST00000378825 MRIQ9BWK5 157 aa19.54■□□□□ 0.72
CCDC3-201ENST00000378825 KCNH7Q9NS40 1196 aa19.54■□□□□ 0.72
CCDC3-201ENST00000378825 SPATS2LQ9NUQ6 558 aaKnown RBP19.54■□□□□ 0.72
CCDC3-201ENST00000378825 COL20A1Q9P218 1284 aa19.54■□□□□ 0.72
CCDC3-201ENST00000378825 ZBTB12Q9Y330 459 aaPredicted RBP19.54■□□□□ 0.72
CCDC3-201ENST00000378825 CAV1Q03135 178 aa19.53■□□□□ 0.72
CCDC3-201ENST00000378825 ZFYVE27Q5T4F4 411 aa19.53■□□□□ 0.72
CCDC3-201ENST00000378825 FAM102BQ5T8I3 360 aa19.53■□□□□ 0.72
CCDC3-201ENST00000378825 SYDE1Q6ZW31 735 aaPredicted RBP19.53■□□□□ 0.72
CCDC3-201ENST00000378825 ZBED8Q8IZ13 594 aa19.53■□□□□ 0.72
CCDC3-201ENST00000378825 ACTL7BQ9Y614 415 aa19.53■□□□□ 0.72
CCDC3-201ENST00000378825 LUC7L3O95232 432 aaKnown RBP19.53■□□□□ 0.72
CCDC3-201ENST00000378825 ATF7P17544 494 aaPredicted RBP19.53■□□□□ 0.72
CCDC3-201ENST00000378825 ATP6V1C1P21283 382 aa19.53■□□□□ 0.72
CCDC3-201ENST00000378825 CNGA1P29973 690 aa19.53■□□□□ 0.72
CCDC3-201ENST00000378825 GTF2BQ00403 316 aa19.53■□□□□ 0.72
CCDC3-201ENST00000378825 CCNG2Q16589 344 aa19.53■□□□□ 0.72
CCDC3-201ENST00000378825 C11orf91Q3C1V1 193 aa19.53■□□□□ 0.72
CCDC3-201ENST00000378825 SCARA3Q6AZY7 606 aa19.53■□□□□ 0.72
CCDC3-201ENST00000378825 CC2D2BQ6DHV5 1058 aa19.53■□□□□ 0.72
CCDC3-201ENST00000378825 SLC39A4Q6P5W5 647 aa19.53■□□□□ 0.72
CCDC3-201ENST00000378825 ZNF75CPQ92670 426 aaPredicted RBP19.53■□□□□ 0.72
CCDC3-201ENST00000378825 SMC6Q96SB8 1091 aa19.53■□□□□ 0.72
CCDC3-201ENST00000378825 ZFP69BQ9UJL9 534 aa19.53■□□□□ 0.72
CCDC3-201ENST00000378825 KRT4P19013 534 aa19.53■□□□□ 0.72
CCDC3-201ENST00000378825 GPC3P51654 580 aa19.53■□□□□ 0.72
CCDC3-201ENST00000378825 WNT7BP56706 349 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms