RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 EIF2B5Q13144 721 aaKnown RBP9.12□□□□□ -0.95
LIG3-202ENST00000378526 KIAA1755Q5JYT7 1200 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 TTC39BQ5VTQ0 682 aaPredicted RBP9.12□□□□□ -0.95
LIG3-202ENST00000378526 PROM2Q8N271 834 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 MAGEB18Q96M61 343 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 RIC8BQ9NVN3 520 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 ZBTB49Q6ZSB9 765 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 COPS6Q7L5N1 327 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.12□□□□□ -0.95
LIG3-202ENST00000378526 CLVS1Q8IUQ0 354 aaPredicted RBP9.12□□□□□ -0.95
LIG3-202ENST00000378526 PROX1Q92786 737 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 GSDMCQ9BYG8 508 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 INTS2Q9H0H0 1204 aaKnown RBP9.12□□□□□ -0.95
LIG3-202ENST00000378526 FOXP1Q9H334 677 aaPredicted RBP9.12□□□□□ -0.95
LIG3-202ENST00000378526 GPHNQ9NQX3 736 aaPredicted RBP9.12□□□□□ -0.95
LIG3-202ENST00000378526 TMCC3Q9ULS5 477 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 TBC1D12O60347 775 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 RFX1P22670 979 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 ZMYND11Q15326 602 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 EID3Q8N140 333 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 BLOC1S5Q8TDH9 187 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 C9orf16Q9BUW7 83 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 ATP8A2Q9NTI2 1148 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 CABP1Q9NZU7 370 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 BAZ2BQ9UIF8 2168 aaKnown RBP9.12□□□□□ -0.95
LIG3-202ENST00000378526 MROH7Q68CQ1 1323 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 DHX15O43143 795 aaKnown RBP9.11□□□□□ -0.95
LIG3-202ENST00000378526 GP5P40197 560 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 MEI1Q5TIA1 1274 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 ANKRD13DQ6ZTN6 518 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 PACS2Q86VP3 889 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 GPN1Q9HCN4 374 aaPredicted RBP9.11□□□□□ -0.95
LIG3-202ENST00000378526 KLHL8Q9P2G9 620 aaPredicted RBP9.11□□□□□ -0.95
LIG3-202ENST00000378526 SNX24Q9Y343 169 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 IRAK3Q9Y616 596 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 H3BMM5 538 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 SULT1B1O43704 296 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 PSMA2P25787 234 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 SLC9A4Q6AI14 798 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 TOR1AIP2Q8NFQ8 470 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 VPS33AQ96AX1 596 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 PHB2Q99623 299 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 KPNA6O60684 536 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 ZC3H11AO75152 810 aaKnown RBP eCLIP9.11□□□□□ -0.95
LIG3-202ENST00000378526 ADAM17P78536 824 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 LRRC74AQ0VAA2 488 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 TRAF2Q12933 501 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 OLFML2AQ68BL7 652 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 PRR23CQ6ZRP0 262 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 FOPNLQ96NB1 174 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 SLC9A7Q96T83 725 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 MEIS3Q99687 375 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.11□□□□□ -0.95
LIG3-202ENST00000378526 FAUP35544 74 aaKnown RBP9.11□□□□□ -0.95
LIG3-202ENST00000378526 NUDT2P50583 147 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 EDRF1Q3B7T1 1238 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 PREPLQ4J6C6 727 aaPredicted RBP9.11□□□□□ -0.95
LIG3-202ENST00000378526 GATAD2BQ8WXI9 593 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 AKAP1Q92667 903 aaKnown RBP eCLIP9.11□□□□□ -0.95
LIG3-202ENST00000378526 TMEM168Q9H0V1 697 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 PKD2L1Q9P0L9 805 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 G3V2T6 193 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 PLOD2O00469 737 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 SEC24BO95487 1268 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 TTC23LQ6PF05 361 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 SNX32Q86XE0 403 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 PNPT1Q8TCS8 783 aaKnown RBP9.11□□□□□ -0.95
LIG3-202ENST00000378526 ERMAPQ96PL5 475 aaPredicted RBP9.11□□□□□ -0.95
LIG3-202ENST00000378526 ZHX2Q9Y6X8 837 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 CLRN2A0PK11 232 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 DHFRP00374 187 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 FASP25445 335 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 PSMB9P28065 219 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 GCLCP48506 637 aaPredicted RBP9.11□□□□□ -0.95
LIG3-202ENST00000378526 PDIA2Q13087 525 aaKnown RBP9.11□□□□□ -0.95
LIG3-202ENST00000378526 PDS5AQ29RF7 1337 aaKnown RBP9.11□□□□□ -0.95
LIG3-202ENST00000378526 FAM102BQ5T8I3 360 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 EGFL6Q8IUX8 553 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 KBTBD8Q8NFY9 601 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 PARD3Q8TEW0 1356 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 SERPINB12Q96P63 405 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 DSCC1Q9BVC3 393 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 TMEM51Q9NW97 253 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 GALNT8Q9NY28 637 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 TMED5Q9Y3A6 229 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 RB1P06400 928 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 ZNF12P17014 697 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 GPC5P78333 572 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 ORC2Q13416 577 aaPredicted RBP9.11□□□□□ -0.95
LIG3-202ENST00000378526 SCAIQ8N9R8 606 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 SPATA4Q8NEY3 305 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 IFT43Q96FT9 208 aa9.11□□□□□ -0.95
LIG3-202ENST00000378526 BTBD18B2RXH4 712 aa9.1□□□□□ -0.95
LIG3-202ENST00000378526 PSMD3O43242 534 aa9.1□□□□□ -0.95
LIG3-202ENST00000378526 SPDYAQ5MJ70 313 aa9.1□□□□□ -0.95
LIG3-202ENST00000378526 ALKBH5Q6P6C2 394 aaKnown RBP9.1□□□□□ -0.95
LIG3-202ENST00000378526 BNC2Q6ZN30 1099 aaPredicted RBP9.1□□□□□ -0.95
LIG3-202ENST00000378526 MAEAQ7L5Y9 396 aa9.1□□□□□ -0.95
LIG3-202ENST00000378526 NLRX1Q86UT6 975 aa9.1□□□□□ -0.95
LIG3-202ENST00000378526 TP53INP1Q96A56 240 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms