RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 EDRF1Q3B7T1 1238 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 NIPAL1Q6NVV3 410 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 BTNL9Q6UXG8 535 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 NELFCDQ8IXH7 590 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 EFHD2Q96C19 240 aaPredicted RBP12.37□□□□□ -0.43
NPHP4-202ENST00000378161 EEF2KMTQ96G04 330 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 LY9Q9HBG7 655 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 NPHS2Q9NP85 383 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 SYBUQ9NX95 663 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 USP20Q9Y2K6 914 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 CAPN6Q9Y6Q1 641 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 TECPR2O15040 1411 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 EPN2O95208 641 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 ALOX5P09917 674 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 ANPEPP15144 967 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 HSPA13P48723 471 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 KLHDC10Q6PID8 442 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 HORMAD1Q86X24 394 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 LSM14AQ8ND56 463 aaKnown RBP12.37□□□□□ -0.43
NPHP4-202ENST00000378161 GPKOWQ92917 476 aaPredicted RBP eCLIP12.37□□□□□ -0.43
NPHP4-202ENST00000378161 CCDC124Q96CT7 223 aaKnown RBP12.37□□□□□ -0.43
NPHP4-202ENST00000378161 TFCP2L1Q9NZI6 479 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 AXIN2Q9Y2T1 843 aa12.37□□□□□ -0.43
NPHP4-202ENST00000378161 ZC3H4Q9UPT8 1303 aaKnown RBP12.36□□□□□ -0.43
NPHP4-202ENST00000378161 CALUO43852 315 aaPredicted RBP12.36□□□□□ -0.43
NPHP4-202ENST00000378161 UQCRBP14927 111 aa12.36□□□□□ -0.43
NPHP4-202ENST00000378161 CCNE1P24864 410 aa12.36□□□□□ -0.43
NPHP4-202ENST00000378161 IL6STP40189 918 aaPredicted RBP12.36□□□□□ -0.43
NPHP4-202ENST00000378161 TECP42680 631 aa12.36□□□□□ -0.43
NPHP4-202ENST00000378161 TRIP13Q15645 432 aaPredicted RBP12.36□□□□□ -0.43
NPHP4-202ENST00000378161 MAELQ96JY0 434 aaKnown RBP12.36□□□□□ -0.43
NPHP4-202ENST00000378161 COMMD8Q9NX08 183 aa12.36□□□□□ -0.43
NPHP4-202ENST00000378161 STK17AQ9UEE5 414 aa12.36□□□□□ -0.43
NPHP4-202ENST00000378161 PHTF1Q9UMS5 762 aa12.36□□□□□ -0.43
NPHP4-202ENST00000378161 FDPSP14324 419 aaKnown RBP12.36□□□□□ -0.43
NPHP4-202ENST00000378161 GJA9P57773 515 aa12.36□□□□□ -0.43
NPHP4-202ENST00000378161 RPS8P62241 208 aaKnown RBP12.36□□□□□ -0.43
NPHP4-202ENST00000378161 TTC23LQ6PF05 361 aa12.36□□□□□ -0.43
NPHP4-202ENST00000378161 JDP2Q8WYK2 163 aa12.36□□□□□ -0.43
NPHP4-202ENST00000378161 MRPL39Q9NYK5 338 aaKnown RBP12.36□□□□□ -0.43
NPHP4-202ENST00000378161 TXNDC16Q9P2K2 825 aa12.36□□□□□ -0.43
NPHP4-202ENST00000378161 ASAP1Q9ULH1 1129 aa12.36□□□□□ -0.43
NPHP4-202ENST00000378161 PCDHA4Q9UN74 947 aa12.36□□□□□ -0.43
NPHP4-202ENST00000378161 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.36□□□□□ -0.43
NPHP4-202ENST00000378161 KLRF2D3W0D1 207 aa12.36□□□□□ -0.43
NPHP4-202ENST00000378161 SRGAP2CP0DJJ0 459 aa12.36□□□□□ -0.43
NPHP4-202ENST00000378161 SRGAP2BP0DMP2 458 aa12.36□□□□□ -0.43
NPHP4-202ENST00000378161 P4HA1P13674 534 aa12.36□□□□□ -0.43
NPHP4-202ENST00000378161 CTNNA2P26232 953 aa12.36□□□□□ -0.43
NPHP4-202ENST00000378161 CDR2LQ86X02 465 aaPredicted RBP12.36□□□□□ -0.43
NPHP4-202ENST00000378161 ELMOD2Q8IZ81 293 aa12.36□□□□□ -0.43
NPHP4-202ENST00000378161 ANKFY1Q9P2R3 1169 aa12.36□□□□□ -0.43
NPHP4-202ENST00000378161 C15orf38-AP3S2A0A0A6YYH1 394 aa12.35□□□□□ -0.43
NPHP4-202ENST00000378161 DDX3XO00571 662 aaKnown RBP eCLIP12.35□□□□□ -0.43
NPHP4-202ENST00000378161 GAS7O60861 476 aa12.35□□□□□ -0.43
NPHP4-202ENST00000378161 TNFAIP3P21580 790 aa12.35□□□□□ -0.43
NPHP4-202ENST00000378161 PMLP29590 882 aa12.35□□□□□ -0.43
NPHP4-202ENST00000378161 NR1H3Q13133 447 aa12.35□□□□□ -0.43
NPHP4-202ENST00000378161 ARPINQ7Z6K5 226 aa12.35□□□□□ -0.43
NPHP4-202ENST00000378161 OR7G1Q8NGA0 311 aa12.35□□□□□ -0.43
NPHP4-202ENST00000378161 RASSF5Q8WWW0 418 aa12.35□□□□□ -0.43
NPHP4-202ENST00000378161 MAML1Q92585 1016 aa12.35□□□□□ -0.43
NPHP4-202ENST00000378161 CITED4Q96RK1 184 aa12.35□□□□□ -0.43
NPHP4-202ENST00000378161 OSBPL8Q9BZF1 889 aa12.35□□□□□ -0.43
NPHP4-202ENST00000378161 GBA3Q9H227 469 aa12.35□□□□□ -0.43
NPHP4-202ENST00000378161 HESX1Q9UBX0 185 aa12.35□□□□□ -0.43
NPHP4-202ENST00000378161 WARS2Q9UGM6 360 aaKnown RBP12.35□□□□□ -0.43
NPHP4-202ENST00000378161 SOS2Q07890 1332 aaPredicted RBP12.35□□□□□ -0.43
NPHP4-202ENST00000378161 FUOMA2VDF0 154 aa12.35□□□□□ -0.43
NPHP4-202ENST00000378161 FAM187AA6NFU0 413 aa12.35□□□□□ -0.43
NPHP4-202ENST00000378161 POC1B-GALNT4F8VUJ3 575 aa12.35□□□□□ -0.43
NPHP4-202ENST00000378161 H3BRJ5 948 aa12.35□□□□□ -0.43
NPHP4-202ENST00000378161 CHRNB1P11230 501 aa12.35□□□□□ -0.43
NPHP4-202ENST00000378161 RXRGP48443 463 aa12.35□□□□□ -0.43
NPHP4-202ENST00000378161 IFI35P80217 286 aaPredicted RBP12.35□□□□□ -0.43
NPHP4-202ENST00000378161 UAP1Q16222 522 aaPredicted RBP12.35□□□□□ -0.43
NPHP4-202ENST00000378161 ITPRIPL1Q6GPH6 555 aa12.35□□□□□ -0.43
NPHP4-202ENST00000378161 TMC3Q7Z5M5 1100 aa12.35□□□□□ -0.43
NPHP4-202ENST00000378161 SEPT8Q92599 483 aa12.35□□□□□ -0.43
NPHP4-202ENST00000378161 LSM14BQ9BX40 385 aaKnown RBP12.35□□□□□ -0.43
NPHP4-202ENST00000378161 NOC2LQ9Y3T9 749 aaKnown RBP12.35□□□□□ -0.43
NPHP4-202ENST00000378161 NEDD4P46934 1319 aa12.35□□□□□ -0.43
NPHP4-202ENST00000378161 WDR17Q8IZU2 1322 aa12.35□□□□□ -0.43
NPHP4-202ENST00000378161 TRIM64A6NGJ6 449 aa12.35□□□□□ -0.43
NPHP4-202ENST00000378161 TRIM64BA6NI03 449 aa12.35□□□□□ -0.43
NPHP4-202ENST00000378161 AREL1O15033 823 aa12.35□□□□□ -0.43
NPHP4-202ENST00000378161 GNG2P59768 71 aa12.35□□□□□ -0.43
NPHP4-202ENST00000378161 ERVK-9P63128 1117 aa12.35□□□□□ -0.43
NPHP4-202ENST00000378161 ARHGAP4P98171 946 aa12.35□□□□□ -0.43
NPHP4-202ENST00000378161 CNGA2Q16280 664 aa12.35□□□□□ -0.43
NPHP4-202ENST00000378161 BARGINQ6ZT62 677 aa12.35□□□□□ -0.43
NPHP4-202ENST00000378161 GDPD5Q8WTR4 605 aa12.35□□□□□ -0.43
NPHP4-202ENST00000378161 PRKAG3Q9UGI9 489 aa12.35□□□□□ -0.43
NPHP4-202ENST00000378161 KIF20BQ96Q89 1820 aa12.35□□□□□ -0.43
NPHP4-202ENST00000378161 E9PBE3 544 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 PODXLO00592 558 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 KMOO15229 486 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 SIN3BO75182 1162 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 FGGP02679 453 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 ENO1P06733 434 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms