RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 EEF1B2P24534 225 aaKnown RBP15.82■□□□□ 0.12
NPHP4-201ENST00000378156 PPARGP37231 505 aaPredicted RBP15.82■□□□□ 0.12
NPHP4-201ENST00000378156 WDR75Q8IWA0 830 aaKnown RBP15.82■□□□□ 0.12
NPHP4-201ENST00000378156 H0Y3Z8 333 aa15.81■□□□□ 0.12
NPHP4-201ENST00000378156 CELF2O95319 508 aaKnown RBP15.81■□□□□ 0.12
NPHP4-201ENST00000378156 AGTP01019 485 aa15.81■□□□□ 0.12
NPHP4-201ENST00000378156 DGKDQ16760 1214 aa15.81■□□□□ 0.12
NPHP4-201ENST00000378156 PPM1NQ8N819 430 aa15.81■□□□□ 0.12
NPHP4-201ENST00000378156 FIS1Q9Y3D6 152 aa15.81■□□□□ 0.12
NPHP4-201ENST00000378156 TCP11X1B4DZS4 312 aa15.81■□□□□ 0.12
NPHP4-201ENST00000378156 GAS2O43903 313 aaKnown RBP15.81■□□□□ 0.12
NPHP4-201ENST00000378156 CRLF3Q8IUI8 442 aa15.81■□□□□ 0.12
NPHP4-201ENST00000378156 OLFM3Q96PB7 478 aa15.81■□□□□ 0.12
NPHP4-201ENST00000378156 SENP7Q9BQF6 1050 aa15.81■□□□□ 0.12
NPHP4-201ENST00000378156 YIPF3Q9GZM5 350 aa15.81■□□□□ 0.12
NPHP4-201ENST00000378156 C1orf228Q6PIY5 440 aa15.81■□□□□ 0.12
NPHP4-201ENST00000378156 KCNK18Q7Z418 384 aa15.81■□□□□ 0.12
NPHP4-201ENST00000378156 NDUFAF2Q8N183 169 aa15.81■□□□□ 0.12
NPHP4-201ENST00000378156 HDAC7Q8WUI4 952 aa15.81■□□□□ 0.12
NPHP4-201ENST00000378156 C3P01024 1663 aa15.81■□□□□ 0.12
NPHP4-201ENST00000378156 GLI1P08151 1106 aa15.8■□□□□ 0.12
NPHP4-201ENST00000378156 PYGBP11216 843 aa15.8■□□□□ 0.12
NPHP4-201ENST00000378156 RGS7P49802 495 aa15.8■□□□□ 0.12
NPHP4-201ENST00000378156 TMPRSS15P98073 1019 aa15.8■□□□□ 0.12
NPHP4-201ENST00000378156 GNASQ5JWF2 1037 aa15.8■□□□□ 0.12
NPHP4-201ENST00000378156 CAPRIN2Q6IMN6 1127 aaKnown RBP15.8■□□□□ 0.12
NPHP4-201ENST00000378156 RRN3P2A6NIE6 340 aa15.8■□□□□ 0.12
NPHP4-201ENST00000378156 NFIBO00712 420 aa15.8■□□□□ 0.12
NPHP4-201ENST00000378156 NFKBIAP25963 317 aa15.8■□□□□ 0.12
NPHP4-201ENST00000378156 HSPA9P38646 679 aaKnown RBP15.8■□□□□ 0.12
NPHP4-201ENST00000378156 AP1B1Q10567 949 aa15.8■□□□□ 0.12
NPHP4-201ENST00000378156 CARD9Q9H257 536 aa15.8■□□□□ 0.12
NPHP4-201ENST00000378156 GPRC5CQ9NQ84 441 aa15.8■□□□□ 0.12
NPHP4-201ENST00000378156 BATF3Q9NR55 127 aa15.8■□□□□ 0.12
NPHP4-201ENST00000378156 CD4P01730 458 aa15.8■□□□□ 0.12
NPHP4-201ENST00000378156 RECQLP46063 649 aaPredicted RBP15.8■□□□□ 0.12
NPHP4-201ENST00000378156 GRIK5Q16478 980 aa15.8■□□□□ 0.12
NPHP4-201ENST00000378156 RCOR2Q8IZ40 523 aa15.8■□□□□ 0.12
NPHP4-201ENST00000378156 XPO6Q96QU8 1125 aaKnown RBP15.8■□□□□ 0.12
NPHP4-201ENST00000378156 SH3GL3Q99963 347 aa15.8■□□□□ 0.12
NPHP4-201ENST00000378156 IDI2Q9BXS1 227 aa15.8■□□□□ 0.12
NPHP4-201ENST00000378156 NIF3L1Q9GZT8 377 aa15.8■□□□□ 0.12
NPHP4-201ENST00000378156 DDX4Q9NQI0 724 aaKnown RBP15.8■□□□□ 0.12
NPHP4-201ENST00000378156 ARHGAP10A1A4S6 786 aa15.8■□□□□ 0.12
NPHP4-201ENST00000378156 PIK3R2O00459 728 aa15.8■□□□□ 0.12
NPHP4-201ENST00000378156 RPS6KA5O75582 802 aa15.8■□□□□ 0.12
NPHP4-201ENST00000378156 PAPOLAP51003 745 aaKnown RBP15.8■□□□□ 0.12
NPHP4-201ENST00000378156 IL17AQ16552 155 aa15.8■□□□□ 0.12
NPHP4-201ENST00000378156 APOBEC3HQ6NTF7 200 aaKnown RBP15.8■□□□□ 0.12
NPHP4-201ENST00000378156 ATP11CQ8NB49 1132 aa15.8■□□□□ 0.12
NPHP4-201ENST00000378156 PGBD4Q96DM1 585 aa15.8■□□□□ 0.12
NPHP4-201ENST00000378156 NT5C1AQ9BXI3 368 aa15.8■□□□□ 0.12
NPHP4-201ENST00000378156 OSGEPQ9NPF4 335 aa15.8■□□□□ 0.12
NPHP4-201ENST00000378156 ZSCAN5CA6NGD5 496 aaPredicted RBP15.79■□□□□ 0.12
NPHP4-201ENST00000378156 ZBBXA8MT70 800 aa15.79■□□□□ 0.12
NPHP4-201ENST00000378156 PDGFRBP09619 1106 aa15.79■□□□□ 0.12
NPHP4-201ENST00000378156 NLRP11P59045 1033 aaKnown RBP15.79■□□□□ 0.12
NPHP4-201ENST00000378156 SLC29A2Q14542 456 aa15.79■□□□□ 0.12
NPHP4-201ENST00000378156 Q4G0T1 1027 aa15.79■□□□□ 0.12
NPHP4-201ENST00000378156 DACT2Q5SW24 774 aa15.79■□□□□ 0.12
NPHP4-201ENST00000378156 AGBL2Q5U5Z8 902 aa15.79■□□□□ 0.12
NPHP4-201ENST00000378156 C9orf131Q5VYM1 1079 aa15.79■□□□□ 0.12
NPHP4-201ENST00000378156 ITPRIPL1Q6GPH6 555 aa15.79■□□□□ 0.12
NPHP4-201ENST00000378156 LRRC37BQ96QE4 947 aa15.79■□□□□ 0.12
NPHP4-201ENST00000378156 TRIM15Q9C019 465 aa15.79■□□□□ 0.12
NPHP4-201ENST00000378156 ETNK1Q9HBU6 452 aa15.79■□□□□ 0.12
NPHP4-201ENST00000378156 KLC4Q9NSK0 619 aa15.79■□□□□ 0.12
NPHP4-201ENST00000378156 G3BP2Q9UN86 482 aaKnown RBP15.79■□□□□ 0.12
NPHP4-201ENST00000378156 WEE2P0C1S8 567 aa15.79■□□□□ 0.12
NPHP4-201ENST00000378156 EIF3EP60228 445 aaKnown RBP15.79■□□□□ 0.12
NPHP4-201ENST00000378156 OCA2Q04671 838 aa15.79■□□□□ 0.12
NPHP4-201ENST00000378156 GRAMD4Q6IC98 578 aa15.79■□□□□ 0.12
NPHP4-201ENST00000378156 ANKMY2Q8IV38 441 aa15.79■□□□□ 0.12
NPHP4-201ENST00000378156 CYP2W1Q8TAV3 490 aa15.79■□□□□ 0.12
NPHP4-201ENST00000378156 MDM1Q8TC05 714 aa15.79■□□□□ 0.12
NPHP4-201ENST00000378156 GRAMD1AQ96CP6 724 aa15.79■□□□□ 0.12
NPHP4-201ENST00000378156 PDCD2LQ9BRP1 358 aa15.79■□□□□ 0.12
NPHP4-201ENST00000378156 PID1Q7Z2X4 250 aa15.79■□□□□ 0.12
NPHP4-201ENST00000378156 CEP70Q8NHQ1 597 aa15.79■□□□□ 0.12
NPHP4-201ENST00000378156 SYTL5Q8TDW5 730 aaPredicted RBP15.79■□□□□ 0.12
NPHP4-201ENST00000378156 STAMBPL1Q96FJ0 436 aa15.79■□□□□ 0.12
NPHP4-201ENST00000378156 SPON2Q9BUD6 331 aa15.79■□□□□ 0.12
NPHP4-201ENST00000378156 MAGEB5Q9BZ81 275 aa15.79■□□□□ 0.12
NPHP4-201ENST00000378156 ANLNQ9NQW6 1124 aa15.79■□□□□ 0.12
NPHP4-201ENST00000378156 FOXP2O15409 715 aa15.79■□□□□ 0.12
NPHP4-201ENST00000378156 PTGISQ16647 500 aa15.79■□□□□ 0.12
NPHP4-201ENST00000378156 KYNUQ16719 465 aa15.79■□□□□ 0.12
NPHP4-201ENST00000378156 PDCD6IPQ8WUM4 868 aaKnown RBP15.79■□□□□ 0.12
NPHP4-201ENST00000378156 RBM15Q96T37 977 aaKnown RBP eCLIP15.79■□□□□ 0.128e-10■■■■■ 32.2
NPHP4-201ENST00000378156 SLC24A3Q9HC58 644 aa15.79■□□□□ 0.12
NPHP4-201ENST00000378156 MRPL40Q9NQ50 206 aaKnown RBP15.79■□□□□ 0.12
NPHP4-201ENST00000378156 PPARGC1AQ9UBK2 798 aaKnown RBP15.79■□□□□ 0.12
NPHP4-201ENST00000378156 APOL1O14791 398 aa15.78■□□□□ 0.12
NPHP4-201ENST00000378156 PLSCR1O15162 318 aa15.78■□□□□ 0.12
NPHP4-201ENST00000378156 NCF2P19878 526 aaPredicted RBP15.78■□□□□ 0.12
NPHP4-201ENST00000378156 GTF2A2P52657 109 aa15.78■□□□□ 0.12
NPHP4-201ENST00000378156 PIGHQ14442 188 aaPredicted RBP15.78■□□□□ 0.12
NPHP4-201ENST00000378156 CDR2LQ86X02 465 aaPredicted RBP15.78■□□□□ 0.12
NPHP4-201ENST00000378156 CYFIP2Q96F07 1278 aa15.78■□□□□ 0.12
NPHP4-201ENST00000378156 IFT43Q96FT9 208 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms