RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 PCDHB13Q9Y5F0 798 aa16.92■□□□□ 0.3
SDHB-201ENST00000375499 GOLGA8IPA6NC78 632 aa16.91■□□□□ 0.3
SDHB-201ENST00000375499 GOLGA8JA6NMD2 632 aa16.91■□□□□ 0.3
SDHB-201ENST00000375499 M0QZQ0 153 aa16.91■□□□□ 0.3
SDHB-201ENST00000375499 ACTN4O43707 911 aaKnown RBP16.91■□□□□ 0.3
SDHB-201ENST00000375499 PDGFBP01127 241 aaPredicted RBP16.91■□□□□ 0.3
SDHB-201ENST00000375499 AFMP43652 599 aa16.91■□□□□ 0.3
SDHB-201ENST00000375499 CUL4BQ13620 913 aa16.91■□□□□ 0.3
SDHB-201ENST00000375499 LIN9Q5TKA1 542 aa16.91■□□□□ 0.3
SDHB-201ENST00000375499 C9orf57Q5W0N0 161 aa16.91■□□□□ 0.3
SDHB-201ENST00000375499 TMEM105Q8N8V8 129 aa16.91■□□□□ 0.3
SDHB-201ENST00000375499 FAM213AQ9BRX8 229 aa16.91■□□□□ 0.3
SDHB-201ENST00000375499 SEMA4AQ9H3S1 761 aa16.91■□□□□ 0.3
SDHB-201ENST00000375499 PCIF1Q9H4Z3 704 aa16.91■□□□□ 0.3
SDHB-201ENST00000375499 SERTAD1Q9UHV2 236 aa16.91■□□□□ 0.3
SDHB-201ENST00000375499 KCNH3Q9ULD8 1083 aa16.91■□□□□ 0.3
SDHB-201ENST00000375499 PCDHB8Q9UN66 801 aa16.91■□□□□ 0.3
SDHB-201ENST00000375499 EXOC7Q9UPT5 735 aa16.91■□□□□ 0.3
SDHB-201ENST00000375499 A0A1B0GVL5 298 aa16.9■□□□□ 0.3
SDHB-201ENST00000375499 ANO9A1A5B4 782 aa16.9■□□□□ 0.3
SDHB-201ENST00000375499 PFKFB1P16118 471 aa16.9■□□□□ 0.3
SDHB-201ENST00000375499 ARPP19P56211 112 aa16.9■□□□□ 0.3
SDHB-201ENST00000375499 ALCAMQ13740 583 aa16.9■□□□□ 0.3
SDHB-201ENST00000375499 CTXN3Q4LDR2 81 aa16.9■□□□□ 0.3
SDHB-201ENST00000375499 FAM26FQ5R3K3 315 aa16.9■□□□□ 0.3
SDHB-201ENST00000375499 PPM1LQ5SGD2 360 aa16.9■□□□□ 0.3
SDHB-201ENST00000375499 ELMSAN1Q6PJG2 1045 aa16.9■□□□□ 0.3
SDHB-201ENST00000375499 GET4Q7L5D6 327 aaPredicted RBP16.9■□□□□ 0.3
SDHB-201ENST00000375499 EPM2AIP1Q7L775 607 aaPredicted RBP16.9■□□□□ 0.3
SDHB-201ENST00000375499 GRASPQ7Z6J2 395 aaPredicted RBP16.9■□□□□ 0.3
SDHB-201ENST00000375499 BRSK2Q8IWQ3 736 aa16.9■□□□□ 0.3
SDHB-201ENST00000375499 CD302Q8IX05 232 aa16.9■□□□□ 0.3
SDHB-201ENST00000375499 SYCP3Q8IZU3 236 aa16.9■□□□□ 0.3
SDHB-201ENST00000375499 ST13P5Q8NFI4 369 aaPredicted RBP16.9■□□□□ 0.3
SDHB-201ENST00000375499 BEST2Q8NFU1 509 aa16.9■□□□□ 0.3
SDHB-201ENST00000375499 MFSD1Q9H3U5 465 aa16.9■□□□□ 0.3
SDHB-201ENST00000375499 ASB7Q9H672 318 aa16.9■□□□□ 0.3
SDHB-201ENST00000375499 MAGEF1Q9HAY2 307 aa16.9■□□□□ 0.3
SDHB-201ENST00000375499 PIDD1Q9HB75 910 aa16.9■□□□□ 0.3
SDHB-201ENST00000375499 HCFC1R1Q9NWW0 138 aa16.9■□□□□ 0.3
SDHB-201ENST00000375499 FAM13BQ9NYF5 915 aa16.9■□□□□ 0.3
SDHB-201ENST00000375499 C2CD2Q9Y426 696 aa16.9■□□□□ 0.3
SDHB-201ENST00000375499 PIRO00625 290 aa16.89■□□□□ 0.29
SDHB-201ENST00000375499 XPOTO43592 962 aaKnown RBP16.89■□□□□ 0.29
SDHB-201ENST00000375499 ABLIM3O94929 683 aa16.89■□□□□ 0.29
SDHB-201ENST00000375499 SEC24AO95486 1093 aa16.89■□□□□ 0.29
SDHB-201ENST00000375499 VNN2O95498 520 aa16.89■□□□□ 0.29
SDHB-201ENST00000375499 OR4Q2P0C623 313 aa16.89■□□□□ 0.29
SDHB-201ENST00000375499 GARTP22102 1010 aa16.89■□□□□ 0.29
SDHB-201ENST00000375499 HOXA9P31269 272 aa16.89■□□□□ 0.29
SDHB-201ENST00000375499 ID4P47928 161 aa16.89■□□□□ 0.29
SDHB-201ENST00000375499 LILRA4P59901 499 aa16.89■□□□□ 0.29
SDHB-201ENST00000375499 KRT85P78386 507 aa16.89■□□□□ 0.29
SDHB-201ENST00000375499 POSTNQ15063 836 aa16.89■□□□□ 0.29
SDHB-201ENST00000375499 ZNF280DQ6N043 979 aa16.89■□□□□ 0.29
SDHB-201ENST00000375499 CYP26C1Q6V0L0 522 aa16.89■□□□□ 0.29
SDHB-201ENST00000375499 UNC13DQ70J99 1090 aa16.89■□□□□ 0.29
SDHB-201ENST00000375499 OTOP3Q7RTS5 596 aa16.89■□□□□ 0.29
SDHB-201ENST00000375499 SPATA32Q96LK8 384 aa16.89■□□□□ 0.29
SDHB-201ENST00000375499 GDPD2Q9HCC8 539 aa16.89■□□□□ 0.29
SDHB-201ENST00000375499 HPSEQ9Y251 543 aa16.89■□□□□ 0.29
SDHB-201ENST00000375499 DERAQ9Y315 318 aa16.89■□□□□ 0.29
SDHB-201ENST00000375499 NRG2O14511 850 aaPredicted RBP16.88■□□□□ 0.29
SDHB-201ENST00000375499 TGFB1I1O43294 461 aa16.88■□□□□ 0.29
SDHB-201ENST00000375499 KLRC4O43908 158 aa16.88■□□□□ 0.29
SDHB-201ENST00000375499 HNRNPA1P09651 372 aaKnown RBP eCLIP16.88■□□□□ 0.29
SDHB-201ENST00000375499 GBP2P32456 591 aaPredicted RBP16.88■□□□□ 0.29
SDHB-201ENST00000375499 AMPD3Q01432 767 aa16.88■□□□□ 0.29
SDHB-201ENST00000375499 ARMCX5Q6P1M9 558 aa16.88■□□□□ 0.29
SDHB-201ENST00000375499 APPL2Q8NEU8 664 aa16.88■□□□□ 0.29
SDHB-201ENST00000375499 ZNF461Q8TAF7 563 aa16.88■□□□□ 0.29
SDHB-201ENST00000375499 SCFD1Q8WVM8 642 aa16.88■□□□□ 0.29
SDHB-201ENST00000375499 RSAD2Q8WXG1 361 aa16.88■□□□□ 0.29
SDHB-201ENST00000375499 ACSF2Q96CM8 615 aaPredicted RBP16.88■□□□□ 0.29
SDHB-201ENST00000375499 TSPAN18Q96SJ8 248 aa16.88■□□□□ 0.29
SDHB-201ENST00000375499 TMEM209Q96SK2 561 aa16.88■□□□□ 0.29
SDHB-201ENST00000375499 RTP3Q9BQQ7 232 aa16.88■□□□□ 0.29
SDHB-201ENST00000375499 LRRC27Q9C0I9 530 aa16.88■□□□□ 0.29
SDHB-201ENST00000375499 DPP3Q9NY33 737 aa16.88■□□□□ 0.29
SDHB-201ENST00000375499 DNMT3BQ9UBC3 853 aaKnown RBP16.88■□□□□ 0.29
SDHB-201ENST00000375499 POLIQ9UNA4 740 aa16.88■□□□□ 0.29
SDHB-201ENST00000375499 H7C4K7 107 aa16.87■□□□□ 0.29
SDHB-201ENST00000375499 EIF3DO15371 548 aaKnown RBP eCLIP16.87■□□□□ 0.29
SDHB-201ENST00000375499 EXTL3O43909 919 aa16.87■□□□□ 0.29
SDHB-201ENST00000375499 CMA1P23946 247 aa16.87■□□□□ 0.29
SDHB-201ENST00000375499 POU5F1Q01860 360 aaKnown RBP16.87■□□□□ 0.29
SDHB-201ENST00000375499 YWHAHQ04917 246 aaPredicted RBP16.87■□□□□ 0.29
SDHB-201ENST00000375499 LMBRD2Q68DH5 695 aaPredicted RBP16.87■□□□□ 0.29
SDHB-201ENST00000375499 POTEHQ6S545 545 aa16.87■□□□□ 0.29
SDHB-201ENST00000375499 DSTYKQ6XUX3 929 aa16.87■□□□□ 0.29
SDHB-201ENST00000375499 CBWD2Q8IUF1 395 aa16.87■□□□□ 0.29
SDHB-201ENST00000375499 NELFCDQ8IXH7 590 aa16.87■□□□□ 0.29
SDHB-201ENST00000375499 ADSSL1Q8N142 457 aa16.87■□□□□ 0.29
SDHB-201ENST00000375499 CXorf38Q8TB03 319 aa16.87■□□□□ 0.29
SDHB-201ENST00000375499 ITFG1Q8TB96 612 aa16.87■□□□□ 0.29
SDHB-201ENST00000375499 NOC3LQ8WTT2 800 aaKnown RBP16.87■□□□□ 0.29
SDHB-201ENST00000375499 BORCS6Q96GS4 357 aa16.87■□□□□ 0.29
SDHB-201ENST00000375499 PAGE5Q96GU1 130 aa16.87■□□□□ 0.29
SDHB-201ENST00000375499 SENP8Q96LD8 212 aa16.87■□□□□ 0.29
SDHB-201ENST00000375499 CRISPLD1Q9H336 500 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms