RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 SESN2P58004 480 aaPredicted RBP18.95■□□□□ 0.62
PTPDC1-202ENST00000375360 SH2D3CQ8N5H7 860 aa18.95■□□□□ 0.62
PTPDC1-202ENST00000375360 FEZF2Q8TBJ5 459 aa18.95■□□□□ 0.62
PTPDC1-202ENST00000375360 PGBD4Q96DM1 585 aa18.95■□□□□ 0.62
PTPDC1-202ENST00000375360 DNAJC18Q9H819 358 aa18.95■□□□□ 0.62
PTPDC1-202ENST00000375360 METTL5Q9NRN9 209 aaKnown RBP18.95■□□□□ 0.62
PTPDC1-202ENST00000375360 FRMPD4Q14CM0 1322 aa18.94■□□□□ 0.62
PTPDC1-202ENST00000375360 KCNN4O15554 427 aa18.94■□□□□ 0.62
PTPDC1-202ENST00000375360 STRNO43815 780 aa18.94■□□□□ 0.62
PTPDC1-202ENST00000375360 ATN1P54259 1190 aaPredicted RBP18.94■□□□□ 0.62
PTPDC1-202ENST00000375360 BIRC2Q13490 618 aa18.94■□□□□ 0.62
PTPDC1-202ENST00000375360 GOLGA7BQ2TAP0 167 aa18.94■□□□□ 0.62
PTPDC1-202ENST00000375360 ACAD10Q6JQN1 1059 aa18.94■□□□□ 0.62
PTPDC1-202ENST00000375360 CCNI2Q6ZMN8 369 aaPredicted RBP18.94■□□□□ 0.62
PTPDC1-202ENST00000375360 OR2W6PQ8NHA6 318 aa18.94■□□□□ 0.62
PTPDC1-202ENST00000375360 ELAC2Q9BQ52 826 aaKnown RBP18.94■□□□□ 0.62
PTPDC1-202ENST00000375360 KRT37O76014 449 aa18.94■□□□□ 0.62
PTPDC1-202ENST00000375360 NIPA1Q7RTP0 329 aa18.94■□□□□ 0.62
PTPDC1-202ENST00000375360 HASPINQ8TF76 798 aa18.94■□□□□ 0.62
PTPDC1-202ENST00000375360 CALR3Q96L12 384 aaKnown RBP18.94■□□□□ 0.62
PTPDC1-202ENST00000375360 ABHD16BQ9H3Z7 469 aa18.94■□□□□ 0.62
PTPDC1-202ENST00000375360 SLC26A2P50443 739 aa18.94■□□□□ 0.62
PTPDC1-202ENST00000375360 DHX34Q14147 1143 aaKnown RBP18.94■□□□□ 0.62
PTPDC1-202ENST00000375360 CBWD6Q4V339 395 aa18.94■□□□□ 0.62
PTPDC1-202ENST00000375360 CBWD3Q5JTY5 395 aa18.94■□□□□ 0.62
PTPDC1-202ENST00000375360 CBWD5Q5RIA9 395 aa18.94■□□□□ 0.62
PTPDC1-202ENST00000375360 BTNL9Q6UXG8 535 aa18.94■□□□□ 0.62
PTPDC1-202ENST00000375360 SNF8Q96H20 258 aa18.94■□□□□ 0.62
PTPDC1-202ENST00000375360 CISHQ9NSE2 258 aa18.94■□□□□ 0.62
PTPDC1-202ENST00000375360 RALAP11233 206 aa18.93■□□□□ 0.62
PTPDC1-202ENST00000375360 TAF6P49848 677 aa18.93■□□□□ 0.62
PTPDC1-202ENST00000375360 RASSF2P50749 326 aa18.93■□□□□ 0.62
PTPDC1-202ENST00000375360 PLCB4Q15147 1175 aa18.93■□□□□ 0.62
PTPDC1-202ENST00000375360 MTMR8Q96EF0 704 aa18.93■□□□□ 0.62
PTPDC1-202ENST00000375360 GCNAQ96QF7 691 aa18.93■□□□□ 0.62
PTPDC1-202ENST00000375360 NUDCD1Q96RS6 583 aa18.93■□□□□ 0.62
PTPDC1-202ENST00000375360 ACP6Q9NPH0 428 aa18.93■□□□□ 0.62
PTPDC1-202ENST00000375360 ZNF541Q9H0D2 1346 aa18.93■□□□□ 0.62
PTPDC1-202ENST00000375360 BRAFP15056 766 aa18.93■□□□□ 0.62
PTPDC1-202ENST00000375360 PIGHQ14442 188 aaPredicted RBP18.93■□□□□ 0.62
PTPDC1-202ENST00000375360 USP38Q8NB14 1042 aa18.93■□□□□ 0.62
PTPDC1-202ENST00000375360 KAT5Q92993 513 aa18.93■□□□□ 0.62
PTPDC1-202ENST00000375360 RAB6BQ9NRW1 208 aa18.93■□□□□ 0.62
PTPDC1-202ENST00000375360 UBQLN1Q9UMX0 589 aaKnown RBP18.93■□□□□ 0.62
PTPDC1-202ENST00000375360 CHD2O14647 1828 aaKnown RBP18.93■□□□□ 0.62
PTPDC1-202ENST00000375360 BCL9LQ86UU0 1499 aa18.93■□□□□ 0.62
PTPDC1-202ENST00000375360 CCDC160A6NGH7 325 aa18.93■□□□□ 0.62
PTPDC1-202ENST00000375360 PIK3CDO00329 1044 aa18.93■□□□□ 0.62
PTPDC1-202ENST00000375360 ATP9BO43861 1147 aa18.93■□□□□ 0.62
PTPDC1-202ENST00000375360 AKAP5P24588 427 aa18.93■□□□□ 0.62
PTPDC1-202ENST00000375360 BEX3Q00994 111 aa18.93■□□□□ 0.62
PTPDC1-202ENST00000375360 TREML2Q5T2D2 321 aa18.93■□□□□ 0.62
PTPDC1-202ENST00000375360 RCOR2Q8IZ40 523 aa18.93■□□□□ 0.62
PTPDC1-202ENST00000375360 UBN1Q9NPG3 1134 aa18.93■□□□□ 0.62
PTPDC1-202ENST00000375360 H3BRJ5 948 aa18.93■□□□□ 0.62
PTPDC1-202ENST00000375360 DFFAO00273 331 aa18.93■□□□□ 0.62
PTPDC1-202ENST00000375360 ZBTB24O43167 697 aaPredicted RBP18.93■□□□□ 0.62
PTPDC1-202ENST00000375360 RBP3P10745 1247 aa18.93■□□□□ 0.62
PTPDC1-202ENST00000375360 ACO1P21399 889 aaKnown RBP18.93■□□□□ 0.62
PTPDC1-202ENST00000375360 NUMBP49757 651 aa18.93■□□□□ 0.62
PTPDC1-202ENST00000375360 FAM133BQ5BKY9 247 aaKnown RBP18.93■□□□□ 0.62
PTPDC1-202ENST00000375360 PARD3BQ8TEW8 1205 aa18.93■□□□□ 0.62
PTPDC1-202ENST00000375360 EXT2Q93063 718 aa18.93■□□□□ 0.62
PTPDC1-202ENST00000375360 ATP6V1E2Q96A05 226 aa18.93■□□□□ 0.62
PTPDC1-202ENST00000375360 FAM84AQ96KN4 292 aa18.93■□□□□ 0.62
PTPDC1-202ENST00000375360 SYT17Q9BSW7 474 aa18.93■□□□□ 0.62
PTPDC1-202ENST00000375360 IQANK1A0A1B0GTG1 560 aa18.92■□□□□ 0.62
PTPDC1-202ENST00000375360 APOL1O14791 398 aa18.92■□□□□ 0.62
PTPDC1-202ENST00000375360 SPATA31C1P0DKV0 1188 aa18.92■□□□□ 0.62
PTPDC1-202ENST00000375360 SNHG28P0DPA3 235 aa18.92■□□□□ 0.62
PTPDC1-202ENST00000375360 STILQ15468 1287 aa18.92■□□□□ 0.62
PTPDC1-202ENST00000375360 GRIK4Q16099 956 aa18.92■□□□□ 0.62
PTPDC1-202ENST00000375360 P3H1Q32P28 736 aa18.92■□□□□ 0.62
PTPDC1-202ENST00000375360 ARHGAP24Q8N264 748 aa18.92■□□□□ 0.62
PTPDC1-202ENST00000375360 EMC1Q8N766 993 aa18.92■□□□□ 0.62
PTPDC1-202ENST00000375360 ETNPPLQ8TBG4 499 aa18.92■□□□□ 0.62
PTPDC1-202ENST00000375360 TMC2Q8TDI7 906 aa18.92■□□□□ 0.62
PTPDC1-202ENST00000375360 HSD17B14Q9BPX1 270 aa18.92■□□□□ 0.62
PTPDC1-202ENST00000375360 VPS11Q9H270 941 aa18.92■□□□□ 0.62
PTPDC1-202ENST00000375360 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.92■□□□□ 0.62
PTPDC1-202ENST00000375360 ASPHQ12797 758 aa18.92■□□□□ 0.62
PTPDC1-202ENST00000375360 C4orf32Q8N8J7 132 aa18.92■□□□□ 0.62
PTPDC1-202ENST00000375360 ATG4AQ8WYN0 398 aa18.92■□□□□ 0.62
PTPDC1-202ENST00000375360 L3MBTL3Q96JM7 780 aaPredicted RBP18.92■□□□□ 0.62
PTPDC1-202ENST00000375360 CNOT10Q9H9A5 744 aaKnown RBP18.92■□□□□ 0.62
PTPDC1-202ENST00000375360 SYNPO2Q9UMS6 1093 aa18.92■□□□□ 0.62
PTPDC1-202ENST00000375360 C2CD2LO14523 706 aa18.92■□□□□ 0.62
PTPDC1-202ENST00000375360 ADCY3O60266 1144 aa18.92■□□□□ 0.62
PTPDC1-202ENST00000375360 APOEP02649 317 aa18.92■□□□□ 0.62
PTPDC1-202ENST00000375360 CDH8P55286 799 aa18.92■□□□□ 0.62
PTPDC1-202ENST00000375360 TPI1P60174 286 aa18.92■□□□□ 0.62
PTPDC1-202ENST00000375360 JAMLQ86YT9 394 aa18.92■□□□□ 0.62
PTPDC1-202ENST00000375360 ARHGEF19Q8IW93 802 aa18.92■□□□□ 0.62
PTPDC1-202ENST00000375360 SPATA18Q8TC71 538 aa18.92■□□□□ 0.62
PTPDC1-202ENST00000375360 USP33Q8TEY7 942 aa18.92■□□□□ 0.62
PTPDC1-202ENST00000375360 ATXN7L3BQ96GX2 97 aa18.92■□□□□ 0.62
PTPDC1-202ENST00000375360 CGRRF1Q99675 332 aa18.92■□□□□ 0.62
PTPDC1-202ENST00000375360 SNTG2Q9NY99 539 aa18.92■□□□□ 0.62
PTPDC1-202ENST00000375360 BFARQ9NZS9 450 aa18.92■□□□□ 0.62
PTPDC1-202ENST00000375360 CACNA1FO60840 1977 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms