RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 CEP55Q53EZ4 464 aa8.4□□□□□ -1.07
USP48-203ENST00000374732 FBXO48Q5FWF7 155 aa8.4□□□□□ -1.07
USP48-203ENST00000374732 GRTP1Q5TC63 336 aa8.4□□□□□ -1.07
USP48-203ENST00000374732 ZNF574Q6ZN55 896 aaPredicted RBP8.4□□□□□ -1.07
USP48-203ENST00000374732 VASH1Q7L8A9 365 aaPredicted RBP8.4□□□□□ -1.07
USP48-203ENST00000374732 KRT28Q7Z3Y7 464 aa8.4□□□□□ -1.07
USP48-203ENST00000374732 THNSL2Q86YJ6 484 aa8.4□□□□□ -1.07
USP48-203ENST00000374732 ST13P4Q8IZP2 240 aaPredicted RBP8.4□□□□□ -1.07
USP48-203ENST00000374732 CHST13Q8NET6 341 aa8.4□□□□□ -1.07
USP48-203ENST00000374732 CALML6Q8TD86 181 aa8.4□□□□□ -1.07
USP48-203ENST00000374732 DQX1Q8TE96 717 aaKnown RBP8.4□□□□□ -1.07
USP48-203ENST00000374732 SLC9A6Q92581 669 aa8.4□□□□□ -1.07
USP48-203ENST00000374732 MED30Q96HR3 178 aa8.4□□□□□ -1.07
USP48-203ENST00000374732 MNTQ99583 582 aa8.4□□□□□ -1.07
USP48-203ENST00000374732 MEIS3Q99687 375 aa8.4□□□□□ -1.07
USP48-203ENST00000374732 SDF4Q9BRK5 362 aa8.4□□□□□ -1.07
USP48-203ENST00000374732 C9orf16Q9BUW7 83 aa8.4□□□□□ -1.07
USP48-203ENST00000374732 ALG2Q9H553 416 aa8.4□□□□□ -1.07
USP48-203ENST00000374732 THAP1Q9NVV9 213 aa8.4□□□□□ -1.07
USP48-203ENST00000374732 CIDEBQ9UHD4 219 aa8.4□□□□□ -1.07
USP48-203ENST00000374732 MBD1Q9UIS9 605 aaPredicted RBP8.4□□□□□ -1.07
USP48-203ENST00000374732 CLRN2A0PK11 232 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 RGSL1A5PLK6 1076 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 CAPN8A6NHC0 703 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 TXNL1O43396 289 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 ST18O60284 1047 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 KERAO60938 352 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 RNF40O75150 1001 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 TBX18O95935 607 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 PDE6AP16499 860 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 NOS3P29474 1203 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 CSTF2P33240 577 aaKnown RBP eCLIP8.39□□□□□ -1.07
USP48-203ENST00000374732 ABCG1P45844 678 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 AFF1P51825 1210 aaKnown RBP8.39□□□□□ -1.07
USP48-203ENST00000374732 GPR85P60893 370 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 DSG2Q14126 1118 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 AKAP4Q5JQC9 854 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 TBC1D9BQ66K14 1250 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 RETSATQ6NUM9 610 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 MAP4K3Q8IVH8 894 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 SLC41A1Q8IVJ1 513 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 ANKS4BQ8N8V4 417 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 MOSPD2Q8NHP6 518 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 OTUD5Q96G74 571 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 ADAM33Q9BZ11 813 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.39□□□□□ -1.07
USP48-203ENST00000374732 CENPHQ9H3R5 247 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 MRPL39Q9NYK5 338 aaKnown RBP8.39□□□□□ -1.07
USP48-203ENST00000374732 NKIRAS2Q9NYR9 191 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 GPRC5BQ9NZH0 403 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 STX8Q9UNK0 236 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 IQANK1A0A1B0GTG1 560 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 KPNA5O15131 536 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 MAGEB3O15480 346 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 DKC1O60832 514 aaKnown RBP eCLIP8.39□□□□□ -1.07
USP48-203ENST00000374732 CYP11A1P05108 521 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 EDN3P14138 238 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 HNMTP50135 292 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 HADHQ16836 314 aaKnown RBP8.39□□□□□ -1.07
USP48-203ENST00000374732 SPDYAQ5MJ70 313 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 C6orf89Q6UWU4 347 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 G2E3Q7L622 706 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 KRT26Q7Z3Y9 468 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 ANKRD13CQ8N6S4 541 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 EFHBQ8N7U6 833 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 TTC13Q8NBP0 860 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 PSD4Q8NDX1 1056 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 POC1BQ8TC44 478 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 METTL21AQ8WXB1 218 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 SEPT1Q8WYJ6 367 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 STARD8Q92502 1023 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 ASB2Q96Q27 587 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 CARD6Q9BX69 1037 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 THAP9Q9H5L6 903 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 TFB2MQ9H5Q4 396 aaKnown RBP8.39□□□□□ -1.07
USP48-203ENST00000374732 IFT22Q9H7X7 185 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 PIDD1Q9HB75 910 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 KLC4Q9NSK0 619 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 DCTN4Q9UJW0 460 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 FAM32AQ9Y421 112 aaKnown RBP8.39□□□□□ -1.07
USP48-203ENST00000374732 SPATA31A1Q5TZJ5 1347 aa8.39□□□□□ -1.07
USP48-203ENST00000374732 SH3D21A4FU49 640 aa8.38□□□□□ -1.07
USP48-203ENST00000374732 WDR46O15213 610 aaKnown RBP8.38□□□□□ -1.07
USP48-203ENST00000374732 KRT86O43790 486 aa8.38□□□□□ -1.07
USP48-203ENST00000374732 NPTXRO95502 500 aa8.38□□□□□ -1.07
USP48-203ENST00000374732 CALM1P0DP23 149 aa8.38□□□□□ -1.07
USP48-203ENST00000374732 CALM2P0DP24 149 aa8.38□□□□□ -1.07
USP48-203ENST00000374732 CALM3P0DP25 149 aa8.38□□□□□ -1.07
USP48-203ENST00000374732 RARBP10826 455 aa8.38□□□□□ -1.07
USP48-203ENST00000374732 MYL6BP14649 208 aa8.38□□□□□ -1.07
USP48-203ENST00000374732 ERFP50548 548 aa8.38□□□□□ -1.07
USP48-203ENST00000374732 RTP2Q5QGT7 225 aa8.38□□□□□ -1.07
USP48-203ENST00000374732 MARK2Q7KZI7 788 aaKnown RBP8.38□□□□□ -1.07
USP48-203ENST00000374732 MRPL10Q7Z7H8 261 aaKnown RBP8.38□□□□□ -1.07
USP48-203ENST00000374732 ERICH1Q86X53 443 aa8.38□□□□□ -1.07
USP48-203ENST00000374732 HOMER1Q86YM7 354 aa8.38□□□□□ -1.07
USP48-203ENST00000374732 PIK3C3Q8NEB9 887 aa8.38□□□□□ -1.07
USP48-203ENST00000374732 UCMAQ8WVF2 138 aa8.38□□□□□ -1.07
USP48-203ENST00000374732 GJA10Q969M2 543 aa8.38□□□□□ -1.07
USP48-203ENST00000374732 NSMCE3Q96MG7 304 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms