RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 PCK1P35558 622 aa8.26□□□□□ -1.09
HERC4-202ENST00000373700 RAP1GAPP47736 663 aa8.26□□□□□ -1.09
HERC4-202ENST00000373700 RNASELQ05823 741 aaKnown RBP8.26□□□□□ -1.09
HERC4-202ENST00000373700 DHX34Q14147 1143 aaKnown RBP8.26□□□□□ -1.09
HERC4-202ENST00000373700 HGSNATQ68CP4 663 aa8.26□□□□□ -1.09
HERC4-202ENST00000373700 LLGL2Q6P1M3 1020 aa8.26□□□□□ -1.09
HERC4-202ENST00000373700 CEP128Q6ZU80 1094 aa8.26□□□□□ -1.09
HERC4-202ENST00000373700 PALB2Q86YC2 1186 aa8.26□□□□□ -1.09
HERC4-202ENST00000373700 SLC13A5Q86YT5 568 aaPredicted RBP8.26□□□□□ -1.09
HERC4-202ENST00000373700 MAP7D3Q8IWC1 876 aa8.26□□□□□ -1.09
HERC4-202ENST00000373700 C4orf33Q8N1A6 199 aa8.26□□□□□ -1.09
HERC4-202ENST00000373700 ATP8B4Q8TF62 1192 aa8.26□□□□□ -1.09
HERC4-202ENST00000373700 LENG1Q96BZ8 264 aaPredicted RBP8.26□□□□□ -1.09
HERC4-202ENST00000373700 PARK7Q99497 189 aaKnown RBP8.26□□□□□ -1.09
HERC4-202ENST00000373700 OSMRQ99650 979 aa8.26□□□□□ -1.09
HERC4-202ENST00000373700 ZSWIM1Q9BR11 485 aa8.26□□□□□ -1.09
HERC4-202ENST00000373700 VPS33BQ9H267 617 aa8.26□□□□□ -1.09
HERC4-202ENST00000373700 SNX25Q9H3E2 840 aa8.26□□□□□ -1.09
HERC4-202ENST00000373700 TCP11X1B4DZS4 312 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 H3BRB1 525 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 RBAK-RBAKDNI3L0D1 243 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 ZNF862O60290 1169 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 SYF2O95926 243 aaKnown RBP8.25□□□□□ -1.09
HERC4-202ENST00000373700 MT-ND3P03897 115 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 CXCL8P10145 99 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 TROVE2P10155 538 aaKnown RBP eCLIP8.25□□□□□ -1.09
HERC4-202ENST00000373700 RFX1P22670 979 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 TNFAIP2Q03169 654 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 MAPK7Q13164 816 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 RCN2Q14257 317 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 PLCB4Q15147 1175 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 GPAT2Q6NUI2 795 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 ARHGEF18Q6ZSZ5 1173 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 NOP9Q86U38 636 aaKnown RBP8.25□□□□□ -1.09
HERC4-202ENST00000373700 NT5DC3Q86UY8 548 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 C1orf131Q8NDD1 294 aaKnown RBP8.25□□□□□ -1.09
HERC4-202ENST00000373700 UBA3Q8TBC4 463 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 TTC17Q96AE7 1141 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 CHMP6Q96FZ7 201 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 CFAP57Q96MR6 1250 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 RBM15Q96T37 977 aaKnown RBP eCLIP8.25□□□□□ -1.093e-7■■□□□ 13.6
HERC4-202ENST00000373700 EPN3Q9H201 632 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 TUT1Q9H6E5 874 aaKnown RBP8.25□□□□□ -1.09
HERC4-202ENST00000373700 COL4A1P02462 1669 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 NID2Q14112 1375 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 FRMPD4Q14CM0 1322 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 I3L4J1 428 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 ITGB3P05106 788 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 KRT3P12035 628 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 ITGA8P53708 1063 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 CLNS1AP54105 237 aaKnown RBP8.25□□□□□ -1.09
HERC4-202ENST00000373700 CDH8P55286 799 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 METTL7BQ6UX53 244 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 CENPUQ71F23 418 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 LNX1Q8TBB1 728 aaPredicted RBP8.25□□□□□ -1.09
HERC4-202ENST00000373700 ASAP3Q8TDY4 903 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 STMN2Q93045 179 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 CALR3Q96L12 384 aaKnown RBP8.25□□□□□ -1.09
HERC4-202ENST00000373700 FAM81BQ96LP2 452 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 TTYH3Q9C0H2 523 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 GPBP1L1Q9HC44 474 aaPredicted RBP8.25□□□□□ -1.09
HERC4-202ENST00000373700 ZNF214Q9UL59 606 aaPredicted RBP8.25□□□□□ -1.09
HERC4-202ENST00000373700 HES2Q9Y543 173 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 CASZ1Q86V15 1759 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 MYH10P35580 1976 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 A0A0G2JND7 137 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 FZD9O00144 591 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 PJA2O43164 708 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 MED7O43513 233 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 ZBED1O96006 694 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 ADRB2P07550 413 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 COILP38432 576 aaPredicted RBP8.25□□□□□ -1.09
HERC4-202ENST00000373700 PDE1BQ01064 536 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 CDR2Q01850 454 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 LAMTOR4Q0VGL1 99 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 DRP2Q13474 957 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 LGSNQ5TDP6 509 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 EPM2AIP1Q7L775 607 aaPredicted RBP8.25□□□□□ -1.09
HERC4-202ENST00000373700 ATL2Q8NHH9 583 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 AENQ8WTP8 325 aaKnown RBP8.25□□□□□ -1.09
HERC4-202ENST00000373700 SNF8Q96H20 258 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 UVRAGQ9P2Y5 699 aa8.25□□□□□ -1.09
HERC4-202ENST00000373700 G3BP2Q9UN86 482 aaKnown RBP8.25□□□□□ -1.09
HERC4-202ENST00000373700 MRPL42Q9Y6G3 142 aaKnown RBP8.25□□□□□ -1.09
HERC4-202ENST00000373700 PRRC2BQ5JSZ5 2229 aaKnown RBP8.25□□□□□ -1.09
HERC4-202ENST00000373700 RASSF10A6NK89 507 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 STK10O94804 968 aaKnown RBP8.24□□□□□ -1.09
HERC4-202ENST00000373700 CDH6P55285 790 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 MYL6P60660 151 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 MYO1EQ12965 1108 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 CCDC62Q6P9F0 684 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 DSTYKQ6XUX3 929 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 SPATS2Q86XZ4 545 aaKnown RBP8.24□□□□□ -1.09
HERC4-202ENST00000373700 FAF2Q96CS3 445 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 HVCN1Q96D96 273 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 TEPSINQ96N21 525 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 NACA2Q9H009 215 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 PARVAQ9NVD7 372 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 GTF3C4Q9UKN8 822 aa8.24□□□□□ -1.09
HERC4-202ENST00000373700 PCDHGC5Q9Y5F6 944 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms